RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 REG3GQ6UW15 175 aa7.03□□□□□ -1.28
LRP1-202ENST00000338962 FP248Q71RG6 208 aaPredicted RBP7.03□□□□□ -1.28
LRP1-202ENST00000338962 FAM19A1Q7Z5A9 133 aa7.03□□□□□ -1.28
LRP1-202ENST00000338962 C9orf163Q8N9P6 203 aa7.03□□□□□ -1.28
LRP1-202ENST00000338962 DEFB105AQ8NG35 78 aa7.03□□□□□ -1.28
LRP1-202ENST00000338962 Q9BRP9 147 aa7.03□□□□□ -1.28
LRP1-202ENST00000338962 KRTAP17-1Q9BYP8 105 aa7.03□□□□□ -1.28
LRP1-202ENST00000338962 TRAV7A0A075B6U4 112 aa7.02□□□□□ -1.29
LRP1-202ENST00000338962 TRBV7-4A0A0J9YYF1 115 aa7.02□□□□□ -1.29
LRP1-202ENST00000338962 A0A1W2PNN7 141 aa7.02□□□□□ -1.29
LRP1-202ENST00000338962 HAMPP81172 84 aa7.02□□□□□ -1.29
LRP1-202ENST00000338962 DNAH17Q9UFH2 4485 aa7.02□□□□□ -1.29
LRP1-202ENST00000338962 NDUFC1O43677 76 aa7.02□□□□□ -1.29
LRP1-202ENST00000338962 LINC01547P58512 204 aaPredicted RBP7.02□□□□□ -1.29
LRP1-202ENST00000338962 Q6ZVQ6 151 aa7.02□□□□□ -1.29
LRP1-202ENST00000338962 CHTF8P0CG12 524 aa7.01□□□□□ -1.29
LRP1-202ENST00000338962 UBE2BP63146 152 aa7.01□□□□□ -1.29
LRP1-202ENST00000338962 C20orf197Q8N268 126 aa7.01□□□□□ -1.29
LRP1-202ENST00000338962 Q8N377 158 aa7□□□□□ -1.29
LRP1-202ENST00000338962 LINC00474Q9P2X8 69 aa6.99□□□□□ -1.29
LRP1-202ENST00000338962 FRAS1Q86XX4 4008 aa6.99□□□□□ -1.29
LRP1-202ENST00000338962 FAT2Q9NYQ8 4349 aa6.99□□□□□ -1.29
LRP1-202ENST00000338962 TNP2Q05952 138 aa6.98□□□□□ -1.29
LRP1-202ENST00000338962 IGLV5-48A0A075B6I7 105 aa6.97□□□□□ -1.29
LRP1-202ENST00000338962 A0A087WTM6 91 aa6.97□□□□□ -1.29
LRP1-202ENST00000338962 ST20-AS1Q8NBB2 130 aa6.97□□□□□ -1.29
LRP1-202ENST00000338962 BRK1Q8WUW1 75 aa6.97□□□□□ -1.29
LRP1-202ENST00000338962 ERC2-IT1O76042 136 aa6.96□□□□□ -1.29
LRP1-202ENST00000338962 PHF5AQ7RTV0 110 aaKnown RBP6.96□□□□□ -1.29
LRP1-202ENST00000338962 PRLHP81277 87 aa6.96□□□□□ -1.3
LRP1-202ENST00000338962 EPPK1P58107 5090 aaKnown RBP6.94□□□□□ -1.3
LRP1-202ENST00000338962 HIGD2AQ9BW72 106 aa6.93□□□□□ -1.3
LRP1-202ENST00000338962 A0A1B0GVY2 172 aa6.92□□□□□ -1.3
LRP1-202ENST00000338962 PANO1I0J062 215 aa6.92□□□□□ -1.3
LRP1-202ENST00000338962 DNAH11Q96DT5 4516 aa6.92□□□□□ -1.3
LRP1-202ENST00000338962 KRTAP11-1Q8IUC1 163 aa6.92□□□□□ -1.3
LRP1-202ENST00000338962 PRR15Q8IV56 129 aa6.92□□□□□ -1.3
LRP1-202ENST00000338962 A0A1B0GW54 56 aa6.91□□□□□ -1.3
LRP1-202ENST00000338962 SPACA4Q8TDM5 124 aa6.91□□□□□ -1.3
LRP1-202ENST00000338962 A0A0U1RQV1 116 aa6.91□□□□□ -1.3
LRP1-202ENST00000338962 FUSP35637 526 aaKnown RBP eCLIP6.91□□□□□ -1.3
LRP1-202ENST00000338962 PMAIP1Q13794 54 aa6.91□□□□□ -1.3
LRP1-202ENST00000338962 C1orf137Q5JT78 98 aa6.91□□□□□ -1.3
LRP1-202ENST00000338962 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.91□□□□□ -1.3
LRP1-202ENST00000338962 F8WEM9 126 aa6.9□□□□□ -1.3
LRP1-202ENST00000338962 H0Y9J4 135 aa6.9□□□□□ -1.3
LRP1-202ENST00000338962 NREPQ16612 68 aa6.9□□□□□ -1.3
LRP1-202ENST00000338962 HECTD4Q9Y4D8 3996 aa6.89□□□□□ -1.31
LRP1-202ENST00000338962 UBE2AP49459 152 aa6.89□□□□□ -1.31
LRP1-202ENST00000338962 PKD1P98161 4303 aa6.88□□□□□ -1.31
LRP1-202ENST00000338962 KRTAP10-2P60368 255 aa6.88□□□□□ -1.31
LRP1-202ENST00000338962 SMIM29Q86T20 159 aa6.88□□□□□ -1.31
LRP1-202ENST00000338962 BPY2O14599 106 aa6.87□□□□□ -1.31
LRP1-202ENST00000338962 IGLV5-52A0A0A0MRZ9 124 aa6.86□□□□□ -1.31
LRP1-202ENST00000338962 CD164Q04900 197 aa6.86□□□□□ -1.31
LRP1-202ENST00000338962 Q8NBF4 154 aa6.86□□□□□ -1.31
LRP1-202ENST00000338962 A0A1W2PNM2 257 aa6.86□□□□□ -1.31
LRP1-202ENST00000338962 SCXQ7RTU7 201 aa6.86□□□□□ -1.31
LRP1-202ENST00000338962 SRRM2Q9UQ35 2752 aaKnown RBP6.85□□□□□ -1.31
LRP1-202ENST00000338962 SNURFQ9Y675 71 aa6.84□□□□□ -1.31
LRP1-202ENST00000338962 DNAH5Q8TE73 4624 aa6.84□□□□□ -1.31
LRP1-202ENST00000338962 SPRR4Q96PI1 79 aa6.84□□□□□ -1.32
LRP1-202ENST00000338962 PKHD1P08F94 4074 aa6.83□□□□□ -1.32
LRP1-202ENST00000338962 IGKV4-1P06312 121 aa6.82□□□□□ -1.32
LRP1-202ENST00000338962 KRTAP13-1Q8IUC0 172 aa6.82□□□□□ -1.32
LRP1-202ENST00000338962 TMEM254Q8TBM7 123 aa6.82□□□□□ -1.32
LRP1-202ENST00000338962 DYNC1H1Q14204 4646 aaKnown RBP6.82□□□□□ -1.32
LRP1-202ENST00000338962 SPRR1BP22528 89 aa6.82□□□□□ -1.32
LRP1-202ENST00000338962 IGFL1Q6UW32 110 aa6.82□□□□□ -1.32
LRP1-202ENST00000338962 PLAC8Q9NZF1 115 aa6.82□□□□□ -1.32
LRP1-202ENST00000338962 IGLV8-61A0A075B6I0 122 aa6.81□□□□□ -1.32
LRP1-202ENST00000338962 LRP1BQ9NZR2 4599 aa6.8□□□□□ -1.32
LRP1-202ENST00000338962 A0A0G2JQZ4 141 aa6.79□□□□□ -1.32
LRP1-202ENST00000338962 PSORS1C2Q9UIG4 136 aa6.79□□□□□ -1.32
LRP1-202ENST00000338962 Q8N9L7 120 aa6.78□□□□□ -1.32
LRP1-202ENST00000338962 KRTAP10-1P60331 282 aa6.78□□□□□ -1.32
LRP1-202ENST00000338962 Q1T7F1 81 aa6.78□□□□□ -1.32
LRP1-202ENST00000338962 OCR1Q9BZK8 76 aa6.78□□□□□ -1.32
LRP1-202ENST00000338962 FAM229BQ4G0N7 80 aa6.77□□□□□ -1.33
LRP1-202ENST00000338962 MPLKIPQ8TAP9 179 aa6.76□□□□□ -1.33
LRP1-202ENST00000338962 Q6ZSA8 131 aa6.76□□□□□ -1.33
LRP1-202ENST00000338962 A0A087WSZ3 146 aa6.75□□□□□ -1.33
LRP1-202ENST00000338962 DNAH8Q96JB1 4490 aa6.75□□□□□ -1.33
LRP1-202ENST00000338962 ZNF706Q9Y5V0 76 aaPredicted RBP6.75□□□□□ -1.33
LRP1-202ENST00000338962 FAM30AQ9NZY2 134 aa6.74□□□□□ -1.33
LRP1-202ENST00000338962 ZNF861PO60384 105 aa6.73□□□□□ -1.33
LRP1-202ENST00000338962 LINC00483Q53H64 154 aa6.72□□□□□ -1.33
LRP1-202ENST00000338962 IGLV9-49A0A0B4J1Y8 123 aa6.71□□□□□ -1.33
LRP1-202ENST00000338962 APOBP04114 4563 aaKnown RBP6.71□□□□□ -1.34
LRP1-202ENST00000338962 hDV103S1A0JD37 113 aa6.71□□□□□ -1.34
LRP1-202ENST00000338962 DSCR10P59022 87 aa6.71□□□□□ -1.34
LRP1-202ENST00000338962 HERC2O95714 4834 aa6.7□□□□□ -1.34
LRP1-202ENST00000338962 CDK2AP2O75956 126 aa6.7□□□□□ -1.34
LRP1-202ENST00000338962 CIRBP-AS1Q8TBR5 109 aa6.7□□□□□ -1.34
LRP1-202ENST00000338962 K7EQZ3 153 aa6.69□□□□□ -1.34
LRP1-202ENST00000338962 IGLV7-43P04211 117 aa6.68□□□□□ -1.34
LRP1-202ENST00000338962 DEFB116Q30KQ4 102 aa6.68□□□□□ -1.34
LRP1-202ENST00000338962 RPL37AP61513 92 aaKnown RBP6.67□□□□□ -1.34
LRP1-202ENST00000338962 HCG22E2RYF7 251 aa6.66□□□□□ -1.34
LRP1-202ENST00000338962 KTN1-AS1Q86SY8 53 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms