RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 H3BQ85 93 aa5.5□□□□□ -1.53
SNCA-201ENST00000336904 CXCL6P80162 114 aa5.5□□□□□ -1.53
SNCA-201ENST00000336904 C9orf163Q8N9P6 203 aa5.5□□□□□ -1.53
SNCA-201ENST00000336904 HECTD4Q9Y4D8 3996 aa5.5□□□□□ -1.53
SNCA-201ENST00000336904 A0A087WSZ3 146 aa5.5□□□□□ -1.53
SNCA-201ENST00000336904 F8WEM9 126 aa5.5□□□□□ -1.53
SNCA-201ENST00000336904 HRCT1Q6UXD1 115 aa5.5□□□□□ -1.53
SNCA-201ENST00000336904 Q8NBF4 154 aa5.5□□□□□ -1.53
SNCA-201ENST00000336904 FAM30AQ9NZY2 134 aa5.5□□□□□ -1.53
SNCA-201ENST00000336904 K7EQZ3 153 aa5.49□□□□□ -1.53
SNCA-201ENST00000336904 LY6G6CO95867 125 aa5.49□□□□□ -1.53
SNCA-201ENST00000336904 DNAH6Q9C0G6 4158 aa5.49□□□□□ -1.53
SNCA-201ENST00000336904 IGLV9-49A0A0B4J1Y8 123 aa5.48□□□□□ -1.53
SNCA-201ENST00000336904 A0A087WTM6 91 aa5.47□□□□□ -1.53
SNCA-201ENST00000336904 C14orf177Q52M58 125 aa5.47□□□□□ -1.53
SNCA-201ENST00000336904 OXTP01178 125 aa5.46□□□□□ -1.54
SNCA-201ENST00000336904 DSCR10P59022 87 aa5.46□□□□□ -1.54
SNCA-201ENST00000336904 WFDC13Q8IUB5 93 aa5.46□□□□□ -1.54
SNCA-201ENST00000336904 TRAV7A0A075B6U4 112 aa5.45□□□□□ -1.54
SNCA-201ENST00000336904 RTL8CO15255 209 aa5.45□□□□□ -1.54
SNCA-201ENST00000336904 HYDINQ4G0P3 5121 aa5.44□□□□□ -1.54
SNCA-201ENST00000336904 SPACA4Q8TDM5 124 aa5.42□□□□□ -1.54
SNCA-201ENST00000336904 SPRR4Q96PI1 79 aa5.42□□□□□ -1.54
SNCA-201ENST00000336904 DNAH17Q9UFH2 4485 aa5.42□□□□□ -1.54
SNCA-201ENST00000336904 H7BZZ5 65 aa5.42□□□□□ -1.54
SNCA-201ENST00000336904 DNAH8Q96JB1 4490 aa5.42□□□□□ -1.54
SNCA-201ENST00000336904 PSORS1C2Q9UIG4 136 aa5.41□□□□□ -1.54
SNCA-201ENST00000336904 IGLV5-52A0A0A0MRZ9 124 aa5.41□□□□□ -1.54
SNCA-201ENST00000336904 BCE1O60756 84 aa5.4□□□□□ -1.54
SNCA-201ENST00000336904 TMEM254Q8TBM7 123 aa5.4□□□□□ -1.54
SNCA-201ENST00000336904 TMEM258P61165 79 aa5.4□□□□□ -1.55
SNCA-201ENST00000336904 OCR1Q9BZK8 76 aa5.4□□□□□ -1.55
SNCA-201ENST00000336904 PRR4Q16378 134 aa5.4□□□□□ -1.55
SNCA-201ENST00000336904 DNAH11Q96DT5 4516 aa5.39□□□□□ -1.55
SNCA-201ENST00000336904 KRTAP10-2P60368 255 aa5.39□□□□□ -1.55
SNCA-201ENST00000336904 C1orf134Q5TEV5 83 aa5.39□□□□□ -1.55
SNCA-201ENST00000336904 Q6ZR54 194 aa5.39□□□□□ -1.55
SNCA-201ENST00000336904 FAM236DA0A1B0GTK5 79 aa5.38□□□□□ -1.55
SNCA-201ENST00000336904 FAM236CP0DP71 79 aa5.38□□□□□ -1.55
SNCA-201ENST00000336904 J3KT08 172 aa5.38□□□□□ -1.55
SNCA-201ENST00000336904 MOBPQ13875 183 aa5.37□□□□□ -1.55
SNCA-201ENST00000336904 LINC00474Q9P2X8 69 aa5.37□□□□□ -1.55
SNCA-201ENST00000336904 H0Y9J4 135 aa5.37□□□□□ -1.55
SNCA-201ENST00000336904 KRTAP13-1Q8IUC0 172 aa5.37□□□□□ -1.55
SNCA-201ENST00000336904 KLKP1Q107X0 134 aa5.36□□□□□ -1.55
SNCA-201ENST00000336904 HCG22E2RYF7 251 aa5.36□□□□□ -1.55
SNCA-201ENST00000336904 DNAH5Q8TE73 4624 aa5.34□□□□□ -1.56
SNCA-201ENST00000336904 IGLV8-61A0A075B6I0 122 aa5.33□□□□□ -1.56
SNCA-201ENST00000336904 SPINK6Q6UWN8 80 aa5.33□□□□□ -1.56
SNCA-201ENST00000336904 C4orf26Q17RF5 130 aa5.33□□□□□ -1.56
SNCA-201ENST00000336904 A0A0U1RQV1 116 aa5.32□□□□□ -1.56
SNCA-201ENST00000336904 CIRBP-AS1Q8TBR5 109 aa5.32□□□□□ -1.56
SNCA-201ENST00000336904 ALMS1Q8TCU4 4167 aa5.32□□□□□ -1.56
SNCA-201ENST00000336904 SPRR1BP22528 89 aa5.31□□□□□ -1.56
SNCA-201ENST00000336904 LRP1BQ9NZR2 4599 aa5.31□□□□□ -1.56
SNCA-201ENST00000336904 FAM229BQ4G0N7 80 aa5.31□□□□□ -1.56
SNCA-201ENST00000336904 LINC00472Q9H8W2 130 aa5.31□□□□□ -1.56
SNCA-201ENST00000336904 PKHD1P08F94 4074 aa5.31□□□□□ -1.56
SNCA-201ENST00000336904 CASC2Q6XLA1 102 aa5.3□□□□□ -1.56
SNCA-201ENST00000336904 WWC2-AS2Q96NR7 200 aa5.3□□□□□ -1.56
SNCA-201ENST00000336904 PLAC8Q9NZF1 115 aa5.3□□□□□ -1.56
SNCA-201ENST00000336904 IGHV6-1A0A0B4J1U7 121 aa5.29□□□□□ -1.56
SNCA-201ENST00000336904 ZNF861PO60384 105 aa5.29□□□□□ -1.56
SNCA-201ENST00000336904 A0A087X002 238 aa5.29□□□□□ -1.56
SNCA-201ENST00000336904 KRTAP10-1P60331 282 aa5.29□□□□□ -1.56
SNCA-201ENST00000336904 NOTCH2NLQ7Z3S9 236 aa5.29□□□□□ -1.56
SNCA-201ENST00000336904 PRR15Q8IV56 129 aa5.29□□□□□ -1.56
SNCA-201ENST00000336904 LINC00208Q96KT6 92 aa5.29□□□□□ -1.56
SNCA-201ENST00000336904 A0A1B0GW54 56 aa5.28□□□□□ -1.56
SNCA-201ENST00000336904 FAT2Q9NYQ8 4349 aa5.28□□□□□ -1.56
SNCA-201ENST00000336904 PKD1P98161 4303 aa5.27□□□□□ -1.57
SNCA-201ENST00000336904 A8MWP4 228 aa5.27□□□□□ -1.57
SNCA-201ENST00000336904 MPLKIPQ8TAP9 179 aa5.27□□□□□ -1.57
SNCA-201ENST00000336904 Q96NJ1 140 aa5.27□□□□□ -1.57
SNCA-201ENST00000336904 NDUFS5O43920 106 aa5.26□□□□□ -1.57
SNCA-201ENST00000336904 IGLV7-43P04211 117 aa5.26□□□□□ -1.57
SNCA-201ENST00000336904 Q5XG85 94 aa5.26□□□□□ -1.57
SNCA-201ENST00000336904 PKIGQ9Y2B9 76 aa5.26□□□□□ -1.57
SNCA-201ENST00000336904 KRTAP29-1A8MX34 341 aaPredicted RBP5.25□□□□□ -1.57
SNCA-201ENST00000336904 RPS28P62857 69 aaKnown RBP5.25□□□□□ -1.57
SNCA-201ENST00000336904 MMP24-AS1A0A0U1RRL7 71 aa5.25□□□□□ -1.57
SNCA-201ENST00000336904 H0Y9P7 68 aa5.24□□□□□ -1.57
SNCA-201ENST00000336904 SERP1Q9Y6X1 66 aa5.24□□□□□ -1.57
SNCA-201ENST00000336904 VPS13BQ7Z7G8 4022 aa5.24□□□□□ -1.57
SNCA-201ENST00000336904 LINC00483Q53H64 154 aa5.24□□□□□ -1.57
SNCA-201ENST00000336904 FP248Q71RG6 208 aaPredicted RBP5.23□□□□□ -1.57
SNCA-201ENST00000336904 hDV103S1A0JD37 113 aa5.23□□□□□ -1.57
SNCA-201ENST00000336904 PCOTHQ58A44 107 aa5.23□□□□□ -1.57
SNCA-201ENST00000336904 NDUFC1O43677 76 aa5.22□□□□□ -1.57
SNCA-201ENST00000336904 RETNLBQ9BQ08 111 aa5.22□□□□□ -1.57
SNCA-201ENST00000336904 ZNF706Q9Y5V0 76 aaPredicted RBP5.22□□□□□ -1.57
SNCA-201ENST00000336904 NDUFB1O75438 58 aa5.22□□□□□ -1.57
SNCA-201ENST00000336904 SMR3BP02814 79 aaPredicted RBP5.21□□□□□ -1.58
SNCA-201ENST00000336904 LCE2DQ5TA82 110 aaPredicted RBP5.21□□□□□ -1.58
SNCA-201ENST00000336904 MP68P56378 58 aa5.21□□□□□ -1.58
SNCA-201ENST00000336904 ZCCHC13Q8WW36 166 aaKnown RBP5.21□□□□□ -1.58
SNCA-201ENST00000336904 C5orf47Q569G3 176 aa5.2□□□□□ -1.58
SNCA-201ENST00000336904 LCE6AA0A183 80 aa5.2□□□□□ -1.58
SNCA-201ENST00000336904 CDK2AP2O75956 126 aa5.2□□□□□ -1.58
SNCA-201ENST00000336904 C8orf17Q9NRJ1 99 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms