RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 ATP5EP56381 51 aaPredicted RBP4.26□□□□□ -1.73
HMG20A-201ENST00000336216 LINC00612Q8N6U2 182 aa4.26□□□□□ -1.73
HMG20A-201ENST00000336216 C15orf56Q8N910 161 aa4.26□□□□□ -1.73
HMG20A-201ENST00000336216 PRR34Q9NV39 138 aa4.26□□□□□ -1.73
HMG20A-201ENST00000336216 FP248Q71RG6 208 aaPredicted RBP4.25□□□□□ -1.73
HMG20A-201ENST00000336216 ELOF1P60002 83 aaKnown RBP4.25□□□□□ -1.73
HMG20A-201ENST00000336216 LINC00208Q96KT6 92 aa4.25□□□□□ -1.73
HMG20A-201ENST00000336216 RETNLBQ9BQ08 111 aa4.25□□□□□ -1.73
HMG20A-201ENST00000336216 PMAIP1Q13794 54 aa4.24□□□□□ -1.73
HMG20A-201ENST00000336216 FAM229BQ4G0N7 80 aa4.24□□□□□ -1.73
HMG20A-201ENST00000336216 C1orf134Q5TEV5 83 aa4.24□□□□□ -1.73
HMG20A-201ENST00000336216 SRRM2Q9UQ35 2752 aaKnown RBP4.24□□□□□ -1.73
HMG20A-201ENST00000336216 H3BNG1 76 aa4.24□□□□□ -1.73
HMG20A-201ENST00000336216 TRBV7-4A0A0J9YYF1 115 aa4.24□□□□□ -1.73
HMG20A-201ENST00000336216 IGHV6-1A0A0B4J1U7 121 aa4.23□□□□□ -1.73
HMG20A-201ENST00000336216 NBDYA0A0U1RRE5 68 aa4.22□□□□□ -1.73
HMG20A-201ENST00000336216 CHKB-CPT1BH3BT56 60 aa4.22□□□□□ -1.73
HMG20A-201ENST00000336216 WIPF1O43516 503 aa4.22□□□□□ -1.73
HMG20A-201ENST00000336216 BCE1O60756 84 aa4.22□□□□□ -1.73
HMG20A-201ENST00000336216 GVQW2A0A096LPI5 108 aaPredicted RBP4.22□□□□□ -1.73
HMG20A-201ENST00000336216 RPL37AP61513 92 aaKnown RBP4.22□□□□□ -1.73
HMG20A-201ENST00000336216 Q6ZRX8 168 aa4.22□□□□□ -1.73
HMG20A-201ENST00000336216 ANAPC11Q9NYG5 84 aa4.22□□□□□ -1.73
HMG20A-201ENST00000336216 EPM2AB3EWF7 344 aa4.21□□□□□ -1.74
HMG20A-201ENST00000336216 PCOTHQ58A44 107 aa4.21□□□□□ -1.74
HMG20A-201ENST00000336216 LINC00528Q8N1L1 170 aa4.21□□□□□ -1.74
HMG20A-201ENST00000336216 K7EQZ3 153 aa4.21□□□□□ -1.74
HMG20A-201ENST00000336216 TGP01266 2768 aa4.2□□□□□ -1.74
HMG20A-201ENST00000336216 ERC2-IT1O76042 136 aa4.2□□□□□ -1.74
HMG20A-201ENST00000336216 MOBPQ13875 183 aa4.2□□□□□ -1.74
HMG20A-201ENST00000336216 LINC00476Q8WZB0 136 aa4.2□□□□□ -1.74
HMG20A-201ENST00000336216 Q8N377 158 aa4.2□□□□□ -1.74
HMG20A-201ENST00000336216 C1orf64Q8NEQ6 169 aa4.19□□□□□ -1.74
HMG20A-201ENST00000336216 KMT2AQ03164 3969 aa4.19□□□□□ -1.74
HMG20A-201ENST00000336216 A8MUN3 132 aa4.19□□□□□ -1.74
HMG20A-201ENST00000336216 PRR15LQ9BU68 103 aa4.19□□□□□ -1.74
HMG20A-201ENST00000336216 A6NED7 52 aa4.19□□□□□ -1.74
HMG20A-201ENST00000336216 CASC2Q6XLA1 102 aa4.18□□□□□ -1.74
HMG20A-201ENST00000336216 C16orf90A8MZG2 172 aa4.18□□□□□ -1.74
HMG20A-201ENST00000336216 HCG22E2RYF7 251 aa4.18□□□□□ -1.74
HMG20A-201ENST00000336216 OCR1Q9BZK8 76 aa4.18□□□□□ -1.74
HMG20A-201ENST00000336216 VPS13DQ5THJ4 4388 aa4.18□□□□□ -1.74
HMG20A-201ENST00000336216 RTL8CO15255 209 aa4.18□□□□□ -1.74
HMG20A-201ENST00000336216 IGLV1-50A0A075B6I6 118 aa4.17□□□□□ -1.74
HMG20A-201ENST00000336216 A0A1W2PNM2 257 aa4.17□□□□□ -1.74
HMG20A-201ENST00000336216 Q8NBF4 154 aa4.17□□□□□ -1.74
HMG20A-201ENST00000336216 FLG2Q5D862 2391 aaPredicted RBP4.17□□□□□ -1.74
HMG20A-201ENST00000336216 H0Y9P7 68 aa4.16□□□□□ -1.74
HMG20A-201ENST00000336216 KCNQ1DNQ9H478 68 aa4.16□□□□□ -1.74
HMG20A-201ENST00000336216 ZNF706Q9Y5V0 76 aaPredicted RBP4.16□□□□□ -1.74
HMG20A-201ENST00000336216 SPACA4Q8TDM5 124 aa4.15□□□□□ -1.74
HMG20A-201ENST00000336216 PKHD1L1Q86WI1 4243 aa4.15□□□□□ -1.74
HMG20A-201ENST00000336216 F8WDY8 70 aa4.15□□□□□ -1.75
HMG20A-201ENST00000336216 TRAV22A0A0B4J277 110 aa4.14□□□□□ -1.75
HMG20A-201ENST00000336216 hDV103S1A0JD37 113 aa4.13□□□□□ -1.75
HMG20A-201ENST00000336216 SMR3BP02814 79 aaPredicted RBP4.13□□□□□ -1.75
HMG20A-201ENST00000336216 FAT3Q8TDW7 4589 aa4.13□□□□□ -1.75
HMG20A-201ENST00000336216 KRTAP1-5Q9BYS1 174 aa4.12□□□□□ -1.75
HMG20A-201ENST00000336216 IGFL1Q6UW32 110 aa4.12□□□□□ -1.75
HMG20A-201ENST00000336216 APLNQ9ULZ1 77 aa4.12□□□□□ -1.75
HMG20A-201ENST00000336216 C9orf163Q8N9P6 203 aa4.12□□□□□ -1.75
HMG20A-201ENST00000336216 HUWE1Q7Z6Z7 4374 aaKnown RBP4.12□□□□□ -1.75
HMG20A-201ENST00000336216 SPINK1P00995 79 aa4.11□□□□□ -1.75
HMG20A-201ENST00000336216 DSCR10P59022 87 aa4.11□□□□□ -1.75
HMG20A-201ENST00000336216 A0A087WTM6 91 aa4.11□□□□□ -1.75
HMG20A-201ENST00000336216 SPAG11AQ6PDA7 123 aa4.11□□□□□ -1.75
HMG20A-201ENST00000336216 DNAH17Q9UFH2 4485 aa4.1□□□□□ -1.75
HMG20A-201ENST00000336216 IGLV5-48A0A075B6I7 105 aa4.09□□□□□ -1.75
HMG20A-201ENST00000336216 IGKV2D-30A0A075B6S6 120 aa4.09□□□□□ -1.75
HMG20A-201ENST00000336216 IGKV2-30P06310 120 aa4.09□□□□□ -1.75
HMG20A-201ENST00000336216 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.09□□□□□ -1.75
HMG20A-201ENST00000336216 TNP2Q05952 138 aa4.08□□□□□ -1.76
HMG20A-201ENST00000336216 WWC2-AS2Q96NR7 200 aa4.08□□□□□ -1.76
HMG20A-201ENST00000336216 PSORS1C2Q9UIG4 136 aa4.08□□□□□ -1.76
HMG20A-201ENST00000336216 ALMS1Q8TCU4 4167 aa4.08□□□□□ -1.76
HMG20A-201ENST00000336216 A8MU10 97 aa4.07□□□□□ -1.76
HMG20A-201ENST00000336216 K7ERS5 55 aa4.06□□□□□ -1.76
HMG20A-201ENST00000336216 PLA2G1BP04054 148 aaKnown RBP4.06□□□□□ -1.76
HMG20A-201ENST00000336216 TLX1NBP0CAT3 122 aa4.06□□□□□ -1.76
HMG20A-201ENST00000336216 LIMD2Q9BT23 127 aa4.05□□□□□ -1.76
HMG20A-201ENST00000336216 KRTAP26-1Q6PEX3 210 aa4.05□□□□□ -1.76
HMG20A-201ENST00000336216 COA5Q86WW8 74 aa4.05□□□□□ -1.76
HMG20A-201ENST00000336216 VPS13BQ7Z7G8 4022 aa4.04□□□□□ -1.76
HMG20A-201ENST00000336216 CD164Q04900 197 aa4.04□□□□□ -1.76
HMG20A-201ENST00000336216 Q1T7F1 81 aa4.04□□□□□ -1.76
HMG20A-201ENST00000336216 ZNF861PO60384 105 aa4.04□□□□□ -1.76
HMG20A-201ENST00000336216 TYMSOSQ8TAI1 123 aa4.04□□□□□ -1.76
HMG20A-201ENST00000336216 A0A1B0GW54 56 aa4.04□□□□□ -1.76
HMG20A-201ENST00000336216 CNBPP62633 177 aaKnown RBP4.04□□□□□ -1.76
HMG20A-201ENST00000336216 PRR15Q8IV56 129 aa4.04□□□□□ -1.76
HMG20A-201ENST00000336216 SPRR4Q96PI1 79 aa4.03□□□□□ -1.76
HMG20A-201ENST00000336216 PANO1I0J062 215 aa4.03□□□□□ -1.76
HMG20A-201ENST00000336216 A8MWP4 228 aa4.02□□□□□ -1.77
HMG20A-201ENST00000336216 Q5VV11 94 aa4.01□□□□□ -1.77
HMG20A-201ENST00000336216 PLA2G2DQ9UNK4 145 aa4.01□□□□□ -1.77
HMG20A-201ENST00000336216 Q8N9P0 234 aaPredicted RBP4□□□□□ -1.77
HMG20A-201ENST00000336216 IGLV8-61A0A075B6I0 122 aa4□□□□□ -1.77
HMG20A-201ENST00000336216 LINC00313P59037 77 aa4□□□□□ -1.77
HMG20A-201ENST00000336216 Q96NJ1 140 aa4□□□□□ -1.77
HMG20A-201ENST00000336216 CYP4F30PQ9H0H9 118 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms