RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 A0A1W2PNM2 257 aa8.88□□□□□ -0.99
SF1-202ENST00000334944 H3BQ85 93 aa8.88□□□□□ -0.99
SF1-202ENST00000334944 IGKV2-24A0A0C4DH68 120 aa8.87□□□□□ -0.99
SF1-202ENST00000334944 WFDC13Q8IUB5 93 aa8.87□□□□□ -0.99
SF1-202ENST00000334944 PRR15LQ9BU68 103 aa8.87□□□□□ -0.99
SF1-202ENST00000334944 Q8N377 158 aa8.86□□□□□ -0.99
SF1-202ENST00000334944 DSCR10P59022 87 aa8.85□□□□□ -0.99
SF1-202ENST00000334944 KCNQ1DNQ9H478 68 aa8.85□□□□□ -0.99
SF1-202ENST00000334944 MDFIQ99750 246 aa8.85□□□□□ -0.99
SF1-202ENST00000334944 DNAH1Q9P2D7 4330 aa8.85□□□□□ -0.99
SF1-202ENST00000334944 DNAH7Q8WXX0 4024 aa8.84□□□□□ -0.99
SF1-202ENST00000334944 DNAH9Q9NYC9 4486 aa8.84□□□□□ -0.99
SF1-202ENST00000334944 Q9BRP9 147 aa8.84□□□□□ -0.99
SF1-202ENST00000334944 LCE6AA0A183 80 aa8.83□□□□□ -1
SF1-202ENST00000334944 LINC00208Q96KT6 92 aa8.83□□□□□ -1
SF1-202ENST00000334944 HCG22E2RYF7 251 aa8.83□□□□□ -1
SF1-202ENST00000334944 UBE2BP63146 152 aa8.82□□□□□ -1
SF1-202ENST00000334944 KTN1-AS1Q86SY8 53 aa8.82□□□□□ -1
SF1-202ENST00000334944 UBE2DNLQ8IWF7 75 aa8.82□□□□□ -1
SF1-202ENST00000334944 C1orf137Q5JT78 98 aa8.81□□□□□ -1
SF1-202ENST00000334944 IGLV1-50A0A075B6I6 118 aa8.81□□□□□ -1
SF1-202ENST00000334944 LCA10Q71F78 164 aa8.81□□□□□ -1
SF1-202ENST00000334944 B9D2Q9BPU9 175 aa8.8□□□□□ -1
SF1-202ENST00000334944 Q6ZRX8 168 aa8.8□□□□□ -1
SF1-202ENST00000334944 TLX1NBP0CAT3 122 aa8.79□□□□□ -1
SF1-202ENST00000334944 CYP4F30PQ9H0H9 118 aa8.79□□□□□ -1
SF1-202ENST00000334944 A6NED7 52 aa8.79□□□□□ -1
SF1-202ENST00000334944 A0A096LNI7 61 aa8.79□□□□□ -1
SF1-202ENST00000334944 Q8N9P0 234 aaPredicted RBP8.79□□□□□ -1
SF1-202ENST00000334944 CHTF8P0CG12 524 aa8.78□□□□□ -1
SF1-202ENST00000334944 UBE2AP49459 152 aa8.78□□□□□ -1
SF1-202ENST00000334944 KRTAP4-16G5E9R7 235 aaPredicted RBP8.77□□□□□ -1.01
SF1-202ENST00000334944 RPL37AP61513 92 aaKnown RBP8.76□□□□□ -1.01
SF1-202ENST00000334944 PRLHP81277 87 aa8.76□□□□□ -1.01
SF1-202ENST00000334944 IGLV5-48A0A075B6I7 105 aa8.75□□□□□ -1.01
SF1-202ENST00000334944 Q8NBF4 154 aa8.74□□□□□ -1.01
SF1-202ENST00000334944 MP68P56378 58 aa8.73□□□□□ -1.01
SF1-202ENST00000334944 PLA2G2DQ9UNK4 145 aa8.73□□□□□ -1.01
SF1-202ENST00000334944 PLECQ15149 4684 aaKnown RBP8.73□□□□□ -1.01
SF1-202ENST00000334944 DHRS4-AS1Q9P1J3 65 aa8.72□□□□□ -1.01
SF1-202ENST00000334944 APLNQ9ULZ1 77 aa8.72□□□□□ -1.01
SF1-202ENST00000334944 SPRR1AP35321 89 aa8.72□□□□□ -1.01
SF1-202ENST00000334944 REG3GQ6UW15 175 aa8.72□□□□□ -1.01
SF1-202ENST00000334944 KRTAP11-1Q8IUC1 163 aa8.71□□□□□ -1.02
SF1-202ENST00000334944 IGLV5-37A0A075B6J1 123 aa8.7□□□□□ -1.02
SF1-202ENST00000334944 PHF5AQ7RTV0 110 aaKnown RBP8.69□□□□□ -1.02
SF1-202ENST00000334944 NDUFB1O75438 58 aa8.69□□□□□ -1.02
SF1-202ENST00000334944 TGP01266 2768 aa8.69□□□□□ -1.02
SF1-202ENST00000334944 A6NN06 94 aa8.68□□□□□ -1.02
SF1-202ENST00000334944 H0Y9P7 68 aa8.68□□□□□ -1.02
SF1-202ENST00000334944 LIMD2Q9BT23 127 aa8.68□□□□□ -1.02
SF1-202ENST00000334944 PRKDCP78527 4128 aaKnown RBP8.67□□□□□ -1.02
SF1-202ENST00000334944 ATP11AUNQ6ZP68 121 aa8.66□□□□□ -1.02
SF1-202ENST00000334944 TNP2Q05952 138 aa8.66□□□□□ -1.02
SF1-202ENST00000334944 MEGF8Q7Z7M0 2845 aa8.65□□□□□ -1.02
SF1-202ENST00000334944 STARD9Q9P2P6 4700 aa8.65□□□□□ -1.02
SF1-202ENST00000334944 PANO1I0J062 215 aa8.65□□□□□ -1.02
SF1-202ENST00000334944 SPAG11AQ6PDA7 123 aa8.65□□□□□ -1.02
SF1-202ENST00000334944 A0A087WSZ3 146 aa8.65□□□□□ -1.03
SF1-202ENST00000334944 PCOTHQ58A44 107 aa8.64□□□□□ -1.03
SF1-202ENST00000334944 COA5Q86WW8 74 aa8.64□□□□□ -1.03
SF1-202ENST00000334944 CNBPP62633 177 aaKnown RBP8.63□□□□□ -1.03
SF1-202ENST00000334944 LINC00476Q8WZB0 136 aa8.63□□□□□ -1.03
SF1-202ENST00000334944 SPRR4Q96PI1 79 aa8.63□□□□□ -1.03
SF1-202ENST00000334944 MOBPQ13875 183 aa8.62□□□□□ -1.03
SF1-202ENST00000334944 PRAC1Q96KF2 57 aa8.61□□□□□ -1.03
SF1-202ENST00000334944 NBDYA0A0U1RRE5 68 aa8.6□□□□□ -1.03
SF1-202ENST00000334944 NDUFS5O43920 106 aa8.6□□□□□ -1.03
SF1-202ENST00000334944 C4orf48Q5BLP8 95 aa8.6□□□□□ -1.03
SF1-202ENST00000334944 Q75L30 129 aa8.6□□□□□ -1.03
SF1-202ENST00000334944 SPINK7P58062 85 aa8.59□□□□□ -1.03
SF1-202ENST00000334944 DNHD1Q96M86 4753 aa8.59□□□□□ -1.03
SF1-202ENST00000334944 IGFL1Q6UW32 110 aa8.58□□□□□ -1.04
SF1-202ENST00000334944 CASC2Q6XLA1 102 aa8.58□□□□□ -1.04
SF1-202ENST00000334944 C7orf65Q6ZTY9 151 aa8.58□□□□□ -1.04
SF1-202ENST00000334944 KMT2AQ03164 3969 aa8.57□□□□□ -1.04
SF1-202ENST00000334944 CDC42SE1Q9NRR8 79 aa8.57□□□□□ -1.04
SF1-202ENST00000334944 LOC101927531A0A1B0GV80 90 aa8.57□□□□□ -1.04
SF1-202ENST00000334944 C9orf163Q8N9P6 203 aa8.56□□□□□ -1.04
SF1-202ENST00000334944 C8orf87E5RJ46 101 aa8.55□□□□□ -1.04
SF1-202ENST00000334944 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.55□□□□□ -1.04
SF1-202ENST00000334944 C14orf177Q52M58 125 aa8.54□□□□□ -1.04
SF1-202ENST00000334944 ADM2Q7Z4H4 148 aa8.54□□□□□ -1.04
SF1-202ENST00000334944 SPANXA2-OT1Q8N9U9 137 aa8.54□□□□□ -1.04
SF1-202ENST00000334944 KRTAP29-1A8MX34 341 aaPredicted RBP8.54□□□□□ -1.04
SF1-202ENST00000334944 KRTAP21-3Q3LHN1 58 aa8.54□□□□□ -1.04
SF1-202ENST00000334944 Q6ZRN7 208 aaPredicted RBP8.54□□□□□ -1.04
SF1-202ENST00000334944 DYNC2H1Q8NCM8 4307 aaKnown RBP8.53□□□□□ -1.04
SF1-202ENST00000334944 A0A1B0GW54 56 aa8.53□□□□□ -1.04
SF1-202ENST00000334944 NUPR2A6NF83 97 aa8.53□□□□□ -1.04
SF1-202ENST00000334944 H0Y9J4 135 aa8.49□□□□□ -1.05
SF1-202ENST00000334944 LINC00313P59037 77 aa8.48□□□□□ -1.05
SF1-202ENST00000334944 FBN3Q75N90 2809 aa8.46□□□□□ -1.06
SF1-202ENST00000334944 FRAS1Q86XX4 4008 aa8.46□□□□□ -1.06
SF1-202ENST00000334944 H3BS24 57 aa8.45□□□□□ -1.06
SF1-202ENST00000334944 VPS13DQ5THJ4 4388 aa8.45□□□□□ -1.06
SF1-202ENST00000334944 A0A087WTM6 91 aa8.45□□□□□ -1.06
SF1-202ENST00000334944 IGLV9-49A0A0B4J1Y8 123 aa8.45□□□□□ -1.06
SF1-202ENST00000334944 IGLV7-46A0A075B6I9 117 aa8.45□□□□□ -1.06
SF1-202ENST00000334944 ANAPC11Q9NYG5 84 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms