RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 BAALC-AS2P0C853 105 aa12.82□□□□□ -0.36
TPM1-204ENST00000334895 SMIM29Q86T20 159 aa12.82□□□□□ -0.36
TPM1-204ENST00000334895 C3orf22Q8N5N4 141 aa12.82□□□□□ -0.36
TPM1-204ENST00000334895 PRO0461Q9UI25 63 aa12.81□□□□□ -0.36
TPM1-204ENST00000334895 PPDPFLQ8WWR9 84 aa12.8□□□□□ -0.36
TPM1-204ENST00000334895 H3BQ85 93 aa12.8□□□□□ -0.36
TPM1-204ENST00000334895 SMCPP49901 116 aaPredicted RBP12.79□□□□□ -0.36
TPM1-204ENST00000334895 TMEM256-PLSCR3K7ERE1 68 aa12.78□□□□□ -0.36
TPM1-204ENST00000334895 UBE2V1Q13404 147 aa12.77□□□□□ -0.36
TPM1-204ENST00000334895 LRP1Q07954 4544 aaKnown RBP12.77□□□□□ -0.37
TPM1-204ENST00000334895 A0A087X002 238 aa12.77□□□□□ -0.37
TPM1-204ENST00000334895 H3BT86 120 aa12.76□□□□□ -0.37
TPM1-204ENST00000334895 FAM229BQ4G0N7 80 aa12.75□□□□□ -0.37
TPM1-204ENST00000334895 FAT3Q8TDW7 4589 aa12.75□□□□□ -0.37
TPM1-204ENST00000334895 MYCBP2O75592 4640 aa12.74□□□□□ -0.37
TPM1-204ENST00000334895 ANKRD29Q8N6D5 301 aa12.74□□□□□ -0.37
TPM1-204ENST00000334895 NDUFV3P56181 108 aaKnown RBP12.73□□□□□ -0.37
TPM1-204ENST00000334895 LINC01600Q96MT4 127 aa12.73□□□□□ -0.37
TPM1-204ENST00000334895 LAMTOR3Q9UHA4 124 aa12.73□□□□□ -0.37
TPM1-204ENST00000334895 KRTAP13-2Q52LG2 175 aa12.72□□□□□ -0.37
TPM1-204ENST00000334895 IGLV9-49A0A0B4J1Y8 123 aa12.7□□□□□ -0.38
TPM1-204ENST00000334895 CRYGAP11844 174 aa12.7□□□□□ -0.38
TPM1-204ENST00000334895 PRR26Q8N8Z3 221 aa12.7□□□□□ -0.38
TPM1-204ENST00000334895 F8W1H4 67 aa12.69□□□□□ -0.38
TPM1-204ENST00000334895 A0A1B0GV72 72 aa12.68□□□□□ -0.38
TPM1-204ENST00000334895 MOBPQ13875 183 aa12.66□□□□□ -0.38
TPM1-204ENST00000334895 IGLV8-61A0A075B6I0 122 aa12.65□□□□□ -0.38
TPM1-204ENST00000334895 F8WEM9 126 aa12.65□□□□□ -0.38
TPM1-204ENST00000334895 C9orf153Q5TBE3 101 aa12.64□□□□□ -0.39
TPM1-204ENST00000334895 OBSCN-AS1Q96MR7 158 aa12.63□□□□□ -0.39
TPM1-204ENST00000334895 A0A0G2JQZ4 141 aa12.62□□□□□ -0.39
TPM1-204ENST00000334895 Q8NBF4 154 aa12.62□□□□□ -0.39
TPM1-204ENST00000334895 TNXBP22105 4242 aa12.61□□□□□ -0.39
TPM1-204ENST00000334895 KRTAP29-1A8MX34 341 aaPredicted RBP12.59□□□□□ -0.39
TPM1-204ENST00000334895 OXTP01178 125 aa12.59□□□□□ -0.39
TPM1-204ENST00000334895 RBM3P98179 157 aaKnown RBP12.59□□□□□ -0.39
TPM1-204ENST00000334895 TYMSOSQ8TAI1 123 aa12.59□□□□□ -0.39
TPM1-204ENST00000334895 JMJD7-PLA2G4BH0Y9G9 81 aa12.58□□□□□ -0.4
TPM1-204ENST00000334895 ETDBQ3ZM63 59 aa12.58□□□□□ -0.4
TPM1-204ENST00000334895 IGFL1Q6UW32 110 aa12.58□□□□□ -0.4
TPM1-204ENST00000334895 KRTAP10-8P60410 259 aa12.57□□□□□ -0.4
TPM1-204ENST00000334895 SSBP3-AS1Q7Z2R9 100 aa12.57□□□□□ -0.4
TPM1-204ENST00000334895 TEN1Q86WV5 123 aa12.57□□□□□ -0.4
TPM1-204ENST00000334895 TRBV7-4A0A0J9YYF1 115 aa12.56□□□□□ -0.4
TPM1-204ENST00000334895 Q6JHZ5 121 aa12.55□□□□□ -0.4
TPM1-204ENST00000334895 C14orf132Q9NPU4 83 aa12.55□□□□□ -0.4
TPM1-204ENST00000334895 DMBT1Q9UGM3 2413 aaPredicted RBP12.55□□□□□ -0.4
TPM1-204ENST00000334895 J3QL48 77 aa12.54□□□□□ -0.4
TPM1-204ENST00000334895 MT1HL1P0DM35 61 aa12.54□□□□□ -0.4
TPM1-204ENST00000334895 HERC1Q15751 4861 aa12.52□□□□□ -0.41
TPM1-204ENST00000334895 DSCR8Q96T75 97 aa12.51□□□□□ -0.41
TPM1-204ENST00000334895 LOC110117498A0A087WWA1 95 aa12.5□□□□□ -0.41
TPM1-204ENST00000334895 A0A1W2PNM2 257 aa12.48□□□□□ -0.41
TPM1-204ENST00000334895 Q6ZQT0 140 aa12.48□□□□□ -0.41
TPM1-204ENST00000334895 HRCT1Q6UXD1 115 aa12.46□□□□□ -0.41
TPM1-204ENST00000334895 LINC00304Q8N9R0 145 aa12.45□□□□□ -0.42
TPM1-204ENST00000334895 CCKP06307 115 aa12.44□□□□□ -0.42
TPM1-204ENST00000334895 PDE6GP18545 87 aa12.43□□□□□ -0.42
TPM1-204ENST00000334895 Q6Q795 121 aa12.43□□□□□ -0.42
TPM1-204ENST00000334895 C21orf62-AS1Q17RA5 79 aa12.42□□□□□ -0.42
TPM1-204ENST00000334895 SPAG11AQ6PDA7 123 aa12.42□□□□□ -0.42
TPM1-204ENST00000334895 CD164Q04900 197 aa12.41□□□□□ -0.42
TPM1-204ENST00000334895 C4orf48Q5BLP8 95 aa12.41□□□□□ -0.42
TPM1-204ENST00000334895 VPS25Q9BRG1 176 aa12.41□□□□□ -0.42
TPM1-204ENST00000334895 TRBV7-7A0A0K0K1E9 115 aa12.38□□□□□ -0.43
TPM1-204ENST00000334895 SPINK1P00995 79 aa12.35□□□□□ -0.43
TPM1-204ENST00000334895 A0A087WSZ3 146 aa12.33□□□□□ -0.43
TPM1-204ENST00000334895 RPS29P62273 56 aaKnown RBP12.32□□□□□ -0.44
TPM1-204ENST00000334895 A0A1B0GW54 56 aa12.29□□□□□ -0.44
TPM1-204ENST00000334895 Q5XG85 94 aa12.28□□□□□ -0.44
TPM1-204ENST00000334895 LIMD2Q9BT23 127 aa12.28□□□□□ -0.44
TPM1-204ENST00000334895 SS18L2Q9UHA2 77 aa12.23□□□□□ -0.45
TPM1-204ENST00000334895 LINC00846Q9NV44 126 aa12.22□□□□□ -0.45
TPM1-204ENST00000334895 ASB16-AS1Q495Z4 193 aa12.21□□□□□ -0.46
TPM1-204ENST00000334895 FAM240AA0A1B0GVK7 77 aa12.19□□□□□ -0.46
TPM1-204ENST00000334895 Q96NJ1 140 aa12.19□□□□□ -0.46
TPM1-204ENST00000334895 C1orf195Q5TG92 126 aa12.17□□□□□ -0.46
TPM1-204ENST00000334895 RETNLBQ9BQ08 111 aa12.17□□□□□ -0.46
TPM1-204ENST00000334895 LINC00472Q9H8W2 130 aa12.16□□□□□ -0.46
TPM1-204ENST00000334895 J3QR89 54 aa12.15□□□□□ -0.46
TPM1-204ENST00000334895 ACYP1P07311 99 aa12.15□□□□□ -0.46
TPM1-204ENST00000334895 Q6ZVQ6 151 aa12.14□□□□□ -0.47
TPM1-204ENST00000334895 NREPQ16612 68 aa12.13□□□□□ -0.47
TPM1-204ENST00000334895 DEFB116Q30KQ4 102 aa12.11□□□□□ -0.47
TPM1-204ENST00000334895 UBL5Q9BZL1 73 aa12.1□□□□□ -0.47
TPM1-204ENST00000334895 K7ERU9 68 aa12.09□□□□□ -0.47
TPM1-204ENST00000334895 HMCN2Q8NDA2 5059 aa12.08□□□□□ -0.48
TPM1-204ENST00000334895 IGKV4-1P06312 121 aa12.04□□□□□ -0.48
TPM1-204ENST00000334895 FP248Q71RG6 208 aaPredicted RBP12.02□□□□□ -0.49
TPM1-204ENST00000334895 CDIP1Q9H305 208 aa12.02□□□□□ -0.49
TPM1-204ENST00000334895 SIGMAR1Q99720 223 aa12□□□□□ -0.49
TPM1-204ENST00000334895 J3KT08 172 aa11.99□□□□□ -0.49
TPM1-204ENST00000334895 BPY2O14599 106 aa11.99□□□□□ -0.49
TPM1-204ENST00000334895 DSCR10P59022 87 aa11.99□□□□□ -0.49
TPM1-204ENST00000334895 PRR4Q16378 134 aa11.97□□□□□ -0.49
TPM1-204ENST00000334895 IGLV7-46A0A075B6I9 117 aa11.94□□□□□ -0.5
TPM1-204ENST00000334895 LINC00643Q86TS7 51 aa11.94□□□□□ -0.5
TPM1-204ENST00000334895 IGKV3D-7A0A0C4DH55 119 aa11.93□□□□□ -0.5
TPM1-204ENST00000334895 A8MWP4 228 aa11.93□□□□□ -0.5
TPM1-204ENST00000334895 CXCL6P80162 114 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms