RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 ORMDL1Q9P0S3 153 aa10.18□□□□□ -0.78
SHOX-201ENST00000334060 C14orf132Q9NPU4 83 aa10.16□□□□□ -0.78
SHOX-201ENST00000334060 SERP1Q9Y6X1 66 aa10.16□□□□□ -0.78
SHOX-201ENST00000334060 ABCA13Q86UQ4 5058 aa10.15□□□□□ -0.78
SHOX-201ENST00000334060 IGKV3D-7A0A0C4DH55 119 aa10.15□□□□□ -0.78
SHOX-201ENST00000334060 SMIM11BQ8TCY0 68 aa10.15□□□□□ -0.78
SHOX-201ENST00000334060 H3BQ85 93 aa10.14□□□□□ -0.79
SHOX-201ENST00000334060 Q5XG85 94 aa10.14□□□□□ -0.79
SHOX-201ENST00000334060 TMEM256-PLSCR3K7ERE1 68 aa10.14□□□□□ -0.79
SHOX-201ENST00000334060 C1orf137Q5JT78 98 aa10.14□□□□□ -0.79
SHOX-201ENST00000334060 PRLHP81277 87 aa10.13□□□□□ -0.79
SHOX-201ENST00000334060 UBL5Q9BZL1 73 aa10.12□□□□□ -0.79
SHOX-201ENST00000334060 KCNQ1DNQ9H478 68 aa10.12□□□□□ -0.79
SHOX-201ENST00000334060 TRAV23DV6A0A075B6W5 121 aa10.12□□□□□ -0.79
SHOX-201ENST00000334060 FAM236DA0A1B0GTK5 79 aa10.12□□□□□ -0.79
SHOX-201ENST00000334060 FAM236CP0DP71 79 aa10.12□□□□□ -0.79
SHOX-201ENST00000334060 ATP5EP56381 51 aaPredicted RBP10.12□□□□□ -0.79
SHOX-201ENST00000334060 PRO0628Q9UI54 55 aa10.12□□□□□ -0.79
SHOX-201ENST00000334060 KRTAP4-16G5E9R7 235 aaPredicted RBP10.11□□□□□ -0.79
SHOX-201ENST00000334060 NDUFC1O43677 76 aa10.11□□□□□ -0.79
SHOX-201ENST00000334060 GHRHP01286 108 aa10.11□□□□□ -0.79
SHOX-201ENST00000334060 Q5VSD8 79 aa10.11□□□□□ -0.79
SHOX-201ENST00000334060 DSCR8Q96T75 97 aa10.11□□□□□ -0.79
SHOX-201ENST00000334060 TRAV7A0A075B6U4 112 aa10.1□□□□□ -0.79
SHOX-201ENST00000334060 REG3GQ6UW15 175 aa10.1□□□□□ -0.79
SHOX-201ENST00000334060 RPL37AP61513 92 aaKnown RBP10.1□□□□□ -0.79
SHOX-201ENST00000334060 C6orf99Q4VX62 202 aa10.09□□□□□ -0.79
SHOX-201ENST00000334060 ZNF73O43830 326 aaPredicted RBP10.08□□□□□ -0.8
SHOX-201ENST00000334060 SPRR1AP35321 89 aa10.08□□□□□ -0.8
SHOX-201ENST00000334060 CYSTM1Q9H1C7 97 aa10.08□□□□□ -0.8
SHOX-201ENST00000334060 LRP1Q07954 4544 aaKnown RBP10.07□□□□□ -0.8
SHOX-201ENST00000334060 PDE6GP18545 87 aa10.07□□□□□ -0.8
SHOX-201ENST00000334060 FAM19A1Q7Z5A9 133 aa10.07□□□□□ -0.8
SHOX-201ENST00000334060 C4orf26Q17RF5 130 aa10.06□□□□□ -0.8
SHOX-201ENST00000334060 MYCBP2O75592 4640 aa10.06□□□□□ -0.8
SHOX-201ENST00000334060 A0A087WVE0 104 aa10.06□□□□□ -0.8
SHOX-201ENST00000334060 SMIM26A0A096LP01 95 aa10.06□□□□□ -0.8
SHOX-201ENST00000334060 PRYO14603 147 aa10.06□□□□□ -0.8
SHOX-201ENST00000334060 OXTP01178 125 aa10.06□□□□□ -0.8
SHOX-201ENST00000334060 KLKP1Q107X0 134 aa10.06□□□□□ -0.8
SHOX-201ENST00000334060 HRCT1Q6UXD1 115 aa10.06□□□□□ -0.8
SHOX-201ENST00000334060 KRTAP13-1Q8IUC0 172 aa10.06□□□□□ -0.8
SHOX-201ENST00000334060 Q8N1X5 172 aa10.06□□□□□ -0.8
SHOX-201ENST00000334060 Q9BRP9 147 aa10.05□□□□□ -0.8
SHOX-201ENST00000334060 ERC2-IT1O76042 136 aa10.05□□□□□ -0.8
SHOX-201ENST00000334060 IGLV7-43P04211 117 aa10.04□□□□□ -0.8
SHOX-201ENST00000334060 LOC110117498A0A087WWA1 95 aa10.02□□□□□ -0.81
SHOX-201ENST00000334060 DIRC1Q969H9 104 aa10.02□□□□□ -0.81
SHOX-201ENST00000334060 FLG2Q5D862 2391 aaPredicted RBP10.01□□□□□ -0.81
SHOX-201ENST00000334060 ETDCA0A1B0GVM5 59 aa10.01□□□□□ -0.81
SHOX-201ENST00000334060 C20orf197Q8N268 126 aa10.01□□□□□ -0.81
SHOX-201ENST00000334060 HIGD2AQ9BW72 106 aa10.01□□□□□ -0.81
SHOX-201ENST00000334060 PKHD1L1Q86WI1 4243 aa10□□□□□ -0.81
SHOX-201ENST00000334060 UBE2AP49459 152 aa10□□□□□ -0.81
SHOX-201ENST00000334060 CXCL6P80162 114 aa10□□□□□ -0.81
SHOX-201ENST00000334060 FAM229AH3BQW9 127 aa9.99□□□□□ -0.81
SHOX-201ENST00000334060 Q6ZRX8 168 aa9.99□□□□□ -0.81
SHOX-201ENST00000334060 H7BZZ5 65 aa9.99□□□□□ -0.81
SHOX-201ENST00000334060 ELOF1P60002 83 aaKnown RBP9.99□□□□□ -0.81
SHOX-201ENST00000334060 ANAPC11Q9NYG5 84 aa9.99□□□□□ -0.81
SHOX-201ENST00000334060 PCLOQ9Y6V0 5065 aa9.98□□□□□ -0.81
SHOX-201ENST00000334060 ZNF861PO60384 105 aa9.97□□□□□ -0.81
SHOX-201ENST00000334060 ST20-AS1Q8NBB2 130 aa9.97□□□□□ -0.81
SHOX-201ENST00000334060 COX7BP24311 80 aa9.97□□□□□ -0.81
SHOX-201ENST00000334060 RBM3P98179 157 aaKnown RBP9.95□□□□□ -0.82
SHOX-201ENST00000334060 PLA2G1BP04054 148 aaKnown RBP9.94□□□□□ -0.82
SHOX-201ENST00000334060 FAT3Q8TDW7 4589 aa9.94□□□□□ -0.82
SHOX-201ENST00000334060 Q6ZQT0 140 aa9.93□□□□□ -0.82
SHOX-201ENST00000334060 LINC00575Q6W349 94 aa9.92□□□□□ -0.82
SHOX-201ENST00000334060 H0Y9J4 135 aa9.9□□□□□ -0.83
SHOX-201ENST00000334060 LINC01547P58512 204 aaPredicted RBP9.9□□□□□ -0.83
SHOX-201ENST00000334060 KRTAP1-4P0C5Y4 121 aa9.89□□□□□ -0.83
SHOX-201ENST00000334060 TRBV7-6A0A0J9YX20 115 aa9.87□□□□□ -0.83
SHOX-201ENST00000334060 LAMTOR3Q9UHA4 124 aa9.87□□□□□ -0.83
SHOX-201ENST00000334060 SPINK6Q6UWN8 80 aa9.86□□□□□ -0.83
SHOX-201ENST00000334060 DEFB105AQ8NG35 78 aa9.86□□□□□ -0.83
SHOX-201ENST00000334060 Q6ZQY7 126 aa9.86□□□□□ -0.83
SHOX-201ENST00000334060 Q6ZVQ6 151 aa9.85□□□□□ -0.83
SHOX-201ENST00000334060 A0A087X002 238 aa9.84□□□□□ -0.83
SHOX-201ENST00000334060 SPRR4Q96PI1 79 aa9.84□□□□□ -0.83
SHOX-201ENST00000334060 F8WEM9 126 aa9.83□□□□□ -0.84
SHOX-201ENST00000334060 DHRS4-AS1Q9P1J3 65 aa9.83□□□□□ -0.84
SHOX-201ENST00000334060 TNXBP22105 4242 aa9.82□□□□□ -0.84
SHOX-201ENST00000334060 TRBV7-4A0A0J9YYF1 115 aa9.81□□□□□ -0.84
SHOX-201ENST00000334060 FP248Q71RG6 208 aaPredicted RBP9.81□□□□□ -0.84
SHOX-201ENST00000334060 Q8N377 158 aa9.8□□□□□ -0.84
SHOX-201ENST00000334060 PRR26Q8N8Z3 221 aa9.8□□□□□ -0.84
SHOX-201ENST00000334060 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.79□□□□□ -0.84
SHOX-201ENST00000334060 KRTAP13-2Q52LG2 175 aa9.79□□□□□ -0.84
SHOX-201ENST00000334060 A0A0G2JQZ4 141 aa9.78□□□□□ -0.84
SHOX-201ENST00000334060 SMIM29Q86T20 159 aa9.77□□□□□ -0.84
SHOX-201ENST00000334060 NREPQ16612 68 aa9.76□□□□□ -0.85
SHOX-201ENST00000334060 TMEM254Q8TBM7 123 aa9.76□□□□□ -0.85
SHOX-201ENST00000334060 IGLV5-48A0A075B6I7 105 aa9.75□□□□□ -0.85
SHOX-201ENST00000334060 A0A1B0GW54 56 aa9.75□□□□□ -0.85
SHOX-201ENST00000334060 V9GYY9 64 aa9.75□□□□□ -0.85
SHOX-201ENST00000334060 LINC00483Q53H64 154 aa9.74□□□□□ -0.85
SHOX-201ENST00000334060 SNURFQ9Y675 71 aa9.74□□□□□ -0.85
SHOX-201ENST00000334060 IGLV9-49A0A0B4J1Y8 123 aa9.74□□□□□ -0.85
SHOX-201ENST00000334060 C1orf195Q5TG92 126 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms