RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 DEFB105AQ8NG35 78 aa5.51□□□□□ -1.53
LSAMP-201ENST00000333617 CHTF8P0CG12 524 aa5.5□□□□□ -1.53
LSAMP-201ENST00000333617 UBE2BP63146 152 aa5.5□□□□□ -1.53
LSAMP-201ENST00000333617 Q8N377 158 aa5.5□□□□□ -1.53
LSAMP-201ENST00000333617 ANAPC13Q9BS18 74 aa5.5□□□□□ -1.53
LSAMP-201ENST00000333617 UBL5Q9BZL1 73 aa5.5□□□□□ -1.53
LSAMP-201ENST00000333617 SRRM2Q9UQ35 2752 aaKnown RBP5.5□□□□□ -1.53
LSAMP-201ENST00000333617 IGKV3D-7A0A0C4DH55 119 aa5.5□□□□□ -1.53
LSAMP-201ENST00000333617 LINC00474Q9P2X8 69 aa5.5□□□□□ -1.53
LSAMP-201ENST00000333617 LINC01547P58512 204 aaPredicted RBP5.49□□□□□ -1.53
LSAMP-201ENST00000333617 IGLV5-48A0A075B6I7 105 aa5.48□□□□□ -1.53
LSAMP-201ENST00000333617 A0A087WTM6 91 aa5.48□□□□□ -1.53
LSAMP-201ENST00000333617 Q6ZR54 194 aa5.48□□□□□ -1.53
LSAMP-201ENST00000333617 ST20-AS1Q8NBB2 130 aa5.48□□□□□ -1.53
LSAMP-201ENST00000333617 FAM236AA0A1B0GUQ0 79 aa5.47□□□□□ -1.53
LSAMP-201ENST00000333617 FAM236BA0A1B0GV22 79 aa5.47□□□□□ -1.53
LSAMP-201ENST00000333617 ERC2-IT1O76042 136 aa5.47□□□□□ -1.53
LSAMP-201ENST00000333617 ATP5EP2Q5VTU8 51 aa5.47□□□□□ -1.53
LSAMP-201ENST00000333617 PHF5AQ7RTV0 110 aaKnown RBP5.47□□□□□ -1.53
LSAMP-201ENST00000333617 DNAH8Q96JB1 4490 aa5.47□□□□□ -1.53
LSAMP-201ENST00000333617 FAM19A1Q7Z5A9 133 aa5.46□□□□□ -1.53
LSAMP-201ENST00000333617 PRLHP81277 87 aa5.46□□□□□ -1.54
LSAMP-201ENST00000333617 DNAH5Q8TE73 4624 aa5.45□□□□□ -1.54
LSAMP-201ENST00000333617 DNAH11Q96DT5 4516 aa5.45□□□□□ -1.54
LSAMP-201ENST00000333617 Q6ZVQ6 151 aa5.45□□□□□ -1.54
LSAMP-201ENST00000333617 C3orf22Q8N5N4 141 aa5.45□□□□□ -1.54
LSAMP-201ENST00000333617 DPH3Q96FX2 82 aa5.45□□□□□ -1.54
LSAMP-201ENST00000333617 PANO1I0J062 215 aa5.44□□□□□ -1.54
LSAMP-201ENST00000333617 LY6G6CO95867 125 aa5.44□□□□□ -1.54
LSAMP-201ENST00000333617 KRTAP11-1Q8IUC1 163 aa5.44□□□□□ -1.54
LSAMP-201ENST00000333617 SPACA4Q8TDM5 124 aa5.44□□□□□ -1.54
LSAMP-201ENST00000333617 H0Y9J4 135 aa5.43□□□□□ -1.54
LSAMP-201ENST00000333617 RTL8CO15255 209 aa5.43□□□□□ -1.54
LSAMP-201ENST00000333617 HIST1H4AP62805 103 aaKnown RBP5.43□□□□□ -1.54
LSAMP-201ENST00000333617 C1orf134Q5TEV5 83 aa5.43□□□□□ -1.54
LSAMP-201ENST00000333617 HIGD2AQ9BW72 106 aa5.43□□□□□ -1.54
LSAMP-201ENST00000333617 HYDINQ4G0P3 5121 aa5.43□□□□□ -1.54
LSAMP-201ENST00000333617 HAMPP81172 84 aa5.42□□□□□ -1.54
LSAMP-201ENST00000333617 LINC00476Q8WZB0 136 aa5.42□□□□□ -1.54
LSAMP-201ENST00000333617 A0A087WVE0 104 aa5.42□□□□□ -1.54
LSAMP-201ENST00000333617 EPM2AB3EWF7 344 aa5.42□□□□□ -1.54
LSAMP-201ENST00000333617 F8WEM9 126 aa5.42□□□□□ -1.54
LSAMP-201ENST00000333617 C1orf137Q5JT78 98 aa5.42□□□□□ -1.54
LSAMP-201ENST00000333617 PKD1P98161 4303 aa5.41□□□□□ -1.54
LSAMP-201ENST00000333617 FUSP35637 526 aaKnown RBP eCLIP5.41□□□□□ -1.54
LSAMP-201ENST00000333617 UBE2AP49459 152 aa5.41□□□□□ -1.54
LSAMP-201ENST00000333617 CXCL6P80162 114 aa5.41□□□□□ -1.54
LSAMP-201ENST00000333617 KRTAP5-11Q6L8G4 156 aa5.41□□□□□ -1.54
LSAMP-201ENST00000333617 SMIM29Q86T20 159 aa5.41□□□□□ -1.54
LSAMP-201ENST00000333617 IGLV5-52A0A0A0MRZ9 124 aa5.4□□□□□ -1.55
LSAMP-201ENST00000333617 A0A1B0GW54 56 aa5.4□□□□□ -1.55
LSAMP-201ENST00000333617 ATOX1O00244 68 aa5.4□□□□□ -1.55
LSAMP-201ENST00000333617 BCE1O60756 84 aa5.4□□□□□ -1.55
LSAMP-201ENST00000333617 C3orf84H3BNL1 204 aa5.39□□□□□ -1.55
LSAMP-201ENST00000333617 NREPQ16612 68 aa5.39□□□□□ -1.55
LSAMP-201ENST00000333617 A0A1W2PNM2 257 aa5.38□□□□□ -1.55
LSAMP-201ENST00000333617 CCDC179H3BU77 68 aa5.38□□□□□ -1.55
LSAMP-201ENST00000333617 Q8NBF4 154 aa5.38□□□□□ -1.55
LSAMP-201ENST00000333617 FAT2Q9NYQ8 4349 aa5.37□□□□□ -1.55
LSAMP-201ENST00000333617 SPRR1BP22528 89 aa5.37□□□□□ -1.55
LSAMP-201ENST00000333617 SCXQ7RTU7 201 aa5.37□□□□□ -1.55
LSAMP-201ENST00000333617 KRTAP13-1Q8IUC0 172 aa5.37□□□□□ -1.55
LSAMP-201ENST00000333617 SPRR4Q96PI1 79 aa5.37□□□□□ -1.55
LSAMP-201ENST00000333617 PLAC8Q9NZF1 115 aa5.37□□□□□ -1.55
LSAMP-201ENST00000333617 IGLV8-61A0A075B6I0 122 aa5.36□□□□□ -1.55
LSAMP-201ENST00000333617 IGFL1Q6UW32 110 aa5.35□□□□□ -1.55
LSAMP-201ENST00000333617 SACSQ9NZJ4 4579 aa5.35□□□□□ -1.55
LSAMP-201ENST00000333617 BPY2O14599 106 aa5.34□□□□□ -1.55
LSAMP-201ENST00000333617 UQCRQO14949 82 aa5.34□□□□□ -1.55
LSAMP-201ENST00000333617 CRYGAP11844 174 aa5.34□□□□□ -1.55
LSAMP-201ENST00000333617 COX7CP15954 63 aa5.34□□□□□ -1.55
LSAMP-201ENST00000333617 KRTAP5-9P26371 169 aa5.33□□□□□ -1.56
LSAMP-201ENST00000333617 PSORS1C2Q9UIG4 136 aa5.33□□□□□ -1.56
LSAMP-201ENST00000333617 SERP2Q8N6R1 65 aa5.33□□□□□ -1.56
LSAMP-201ENST00000333617 FAM30AQ9NZY2 134 aa5.33□□□□□ -1.56
LSAMP-201ENST00000333617 A0A0G2JQZ4 141 aa5.32□□□□□ -1.56
LSAMP-201ENST00000333617 IGKV4-1P06312 121 aa5.31□□□□□ -1.56
LSAMP-201ENST00000333617 C9orf153Q5TBE3 101 aa5.31□□□□□ -1.56
LSAMP-201ENST00000333617 Q8N9L7 120 aa5.3□□□□□ -1.56
LSAMP-201ENST00000333617 ZNF706Q9Y5V0 76 aaPredicted RBP5.3□□□□□ -1.56
LSAMP-201ENST00000333617 SMIM20Q8N5G0 67 aa5.29□□□□□ -1.56
LSAMP-201ENST00000333617 ZNF861PO60384 105 aa5.29□□□□□ -1.56
LSAMP-201ENST00000333617 LINC00483Q53H64 154 aa5.29□□□□□ -1.56
LSAMP-201ENST00000333617 A0A087WSZ3 146 aa5.28□□□□□ -1.56
LSAMP-201ENST00000333617 VPS13BQ7Z7G8 4022 aa5.27□□□□□ -1.57
LSAMP-201ENST00000333617 TRAV7A0A075B6U4 112 aa5.27□□□□□ -1.57
LSAMP-201ENST00000333617 PKHD1P08F94 4074 aa5.27□□□□□ -1.57
LSAMP-201ENST00000333617 IGLV9-49A0A0B4J1Y8 123 aa5.26□□□□□ -1.57
LSAMP-201ENST00000333617 DSCR10P59022 87 aa5.26□□□□□ -1.57
LSAMP-201ENST00000333617 CIRBP-AS1Q8TBR5 109 aa5.26□□□□□ -1.57
LSAMP-201ENST00000333617 LRP1BQ9NZR2 4599 aa5.25□□□□□ -1.57
LSAMP-201ENST00000333617 IGLV7-43P04211 117 aa5.25□□□□□ -1.57
LSAMP-201ENST00000333617 RPL37AP61513 92 aaKnown RBP5.25□□□□□ -1.57
LSAMP-201ENST00000333617 KRTAP10-1P60331 282 aa5.25□□□□□ -1.57
LSAMP-201ENST00000333617 Q6ZSA8 131 aa5.25□□□□□ -1.57
LSAMP-201ENST00000333617 SS18L2Q9UHA2 77 aa5.25□□□□□ -1.57
LSAMP-201ENST00000333617 K7EQZ3 153 aa5.24□□□□□ -1.57
LSAMP-201ENST00000333617 DEFB116Q30KQ4 102 aa5.23□□□□□ -1.57
LSAMP-201ENST00000333617 MOBPQ13875 183 aa5.22□□□□□ -1.57
LSAMP-201ENST00000333617 RYR2Q92736 4967 aa5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms