RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 FAM30AQ9NZY2 134 aa10.09□□□□□ -0.79
PDGFB-201ENST00000331163 PLECQ15149 4684 aaKnown RBP10.08□□□□□ -0.8
PDGFB-201ENST00000331163 IGLV6-57P01721 117 aa10.06□□□□□ -0.8
PDGFB-201ENST00000331163 CXCL6P80162 114 aa10.05□□□□□ -0.8
PDGFB-201ENST00000331163 PDE6GP18545 87 aa10.05□□□□□ -0.8
PDGFB-201ENST00000331163 ERC2-IT1O76042 136 aa10.05□□□□□ -0.8
PDGFB-201ENST00000331163 Q6ZR54 194 aa10.04□□□□□ -0.8
PDGFB-201ENST00000331163 V9GYY9 64 aa10.04□□□□□ -0.8
PDGFB-201ENST00000331163 Q6ZRN7 208 aaPredicted RBP10.04□□□□□ -0.8
PDGFB-201ENST00000331163 DMBT1Q9UGM3 2413 aaPredicted RBP10.04□□□□□ -0.8
PDGFB-201ENST00000331163 STARD9Q9P2P6 4700 aa10.03□□□□□ -0.8
PDGFB-201ENST00000331163 DNAH10Q8IVF4 4471 aa10.03□□□□□ -0.8
PDGFB-201ENST00000331163 CNBPP62633 177 aaKnown RBP10.03□□□□□ -0.8
PDGFB-201ENST00000331163 EPM2AB3EWF7 344 aa10.02□□□□□ -0.8
PDGFB-201ENST00000331163 IGLV1-50A0A075B6I6 118 aa10.02□□□□□ -0.81
PDGFB-201ENST00000331163 PRYO14603 147 aa10.02□□□□□ -0.81
PDGFB-201ENST00000331163 TRBV7-4A0A0J9YYF1 115 aa10.02□□□□□ -0.81
PDGFB-201ENST00000331163 C1orf195Q5TG92 126 aa10.01□□□□□ -0.81
PDGFB-201ENST00000331163 NDUFC1O43677 76 aa10□□□□□ -0.81
PDGFB-201ENST00000331163 F8WDY8 70 aa9.99□□□□□ -0.81
PDGFB-201ENST00000331163 DEFB116Q30KQ4 102 aa9.98□□□□□ -0.81
PDGFB-201ENST00000331163 ELOF1P60002 83 aaKnown RBP9.98□□□□□ -0.81
PDGFB-201ENST00000331163 Q6ZRX8 168 aa9.98□□□□□ -0.81
PDGFB-201ENST00000331163 SMIM29Q86T20 159 aa9.98□□□□□ -0.81
PDGFB-201ENST00000331163 KRTAP11-1Q8IUC1 163 aa9.97□□□□□ -0.81
PDGFB-201ENST00000331163 CIRBP-AS1Q8TBR5 109 aa9.97□□□□□ -0.81
PDGFB-201ENST00000331163 PSPHP1O15172 72 aa9.97□□□□□ -0.81
PDGFB-201ENST00000331163 PSORS1C2Q9UIG4 136 aa9.96□□□□□ -0.81
PDGFB-201ENST00000331163 TLX1NBP0CAT3 122 aa9.96□□□□□ -0.82
PDGFB-201ENST00000331163 KRTAP10-1P60331 282 aa9.96□□□□□ -0.82
PDGFB-201ENST00000331163 KRTAP7-1Q8IUC3 87 aa9.96□□□□□ -0.82
PDGFB-201ENST00000331163 IGKV4-1P06312 121 aa9.95□□□□□ -0.82
PDGFB-201ENST00000331163 DHRS4-AS1Q9P1J3 65 aa9.95□□□□□ -0.82
PDGFB-201ENST00000331163 BCE1O60756 84 aa9.95□□□□□ -0.82
PDGFB-201ENST00000331163 LCE6AA0A183 80 aa9.94□□□□□ -0.82
PDGFB-201ENST00000331163 KCNQ1DNQ9H478 68 aa9.94□□□□□ -0.82
PDGFB-201ENST00000331163 DNAH3Q8TD57 4116 aa9.94□□□□□ -0.82
PDGFB-201ENST00000331163 Q9BRP9 147 aa9.93□□□□□ -0.82
PDGFB-201ENST00000331163 LINC00528Q8N1L1 170 aa9.93□□□□□ -0.82
PDGFB-201ENST00000331163 KMT2AQ03164 3969 aa9.92□□□□□ -0.82
PDGFB-201ENST00000331163 DNAH7Q8WXX0 4024 aa9.92□□□□□ -0.82
PDGFB-201ENST00000331163 SPINK6Q6UWN8 80 aa9.91□□□□□ -0.82
PDGFB-201ENST00000331163 ATP5EP56381 51 aaPredicted RBP9.9□□□□□ -0.83
PDGFB-201ENST00000331163 SPACA4Q8TDM5 124 aa9.88□□□□□ -0.83
PDGFB-201ENST00000331163 OCR1Q9BZK8 76 aa9.88□□□□□ -0.83
PDGFB-201ENST00000331163 H3BQ85 93 aa9.87□□□□□ -0.83
PDGFB-201ENST00000331163 WFDC13Q8IUB5 93 aa9.86□□□□□ -0.83
PDGFB-201ENST00000331163 MOBPQ13875 183 aa9.85□□□□□ -0.83
PDGFB-201ENST00000331163 Q8N377 158 aa9.85□□□□□ -0.83
PDGFB-201ENST00000331163 A0A087WSZ3 146 aa9.83□□□□□ -0.84
PDGFB-201ENST00000331163 C1orf64Q8NEQ6 169 aa9.82□□□□□ -0.84
PDGFB-201ENST00000331163 K7EQZ3 153 aa9.8□□□□□ -0.84
PDGFB-201ENST00000331163 A0A1W2PNM2 257 aa9.79□□□□□ -0.84
PDGFB-201ENST00000331163 PLA2G2DQ9UNK4 145 aa9.78□□□□□ -0.84
PDGFB-201ENST00000331163 H0Y9J4 135 aa9.77□□□□□ -0.85
PDGFB-201ENST00000331163 C4orf48Q5BLP8 95 aa9.75□□□□□ -0.85
PDGFB-201ENST00000331163 A8MUN3 132 aa9.74□□□□□ -0.85
PDGFB-201ENST00000331163 ZNF861PO60384 105 aa9.74□□□□□ -0.85
PDGFB-201ENST00000331163 hDV103S1A0JD37 113 aa9.74□□□□□ -0.85
PDGFB-201ENST00000331163 RPL37AP61513 92 aaKnown RBP9.74□□□□□ -0.85
PDGFB-201ENST00000331163 LINC00208Q96KT6 92 aa9.74□□□□□ -0.85
PDGFB-201ENST00000331163 IGLV5-37A0A075B6J1 123 aa9.73□□□□□ -0.85
PDGFB-201ENST00000331163 PLA2G1BP04054 148 aaKnown RBP9.73□□□□□ -0.85
PDGFB-201ENST00000331163 IGLV7-43P04211 117 aa9.73□□□□□ -0.85
PDGFB-201ENST00000331163 SPTSSBQ8NFR3 76 aa9.72□□□□□ -0.85
PDGFB-201ENST00000331163 CDK2AP2O75956 126 aa9.72□□□□□ -0.85
PDGFB-201ENST00000331163 A8MU10 97 aa9.71□□□□□ -0.86
PDGFB-201ENST00000331163 PLAC8Q9NZF1 115 aa9.71□□□□□ -0.86
PDGFB-201ENST00000331163 TRAV22A0A0B4J277 110 aa9.7□□□□□ -0.86
PDGFB-201ENST00000331163 DSCR10P59022 87 aa9.69□□□□□ -0.86
PDGFB-201ENST00000331163 Q8NBF4 154 aa9.69□□□□□ -0.86
PDGFB-201ENST00000331163 PMAIP1Q13794 54 aa9.68□□□□□ -0.86
PDGFB-201ENST00000331163 DNAH1Q9P2D7 4330 aa9.68□□□□□ -0.86
PDGFB-201ENST00000331163 ZNF706Q9Y5V0 76 aaPredicted RBP9.68□□□□□ -0.86
PDGFB-201ENST00000331163 HCG22E2RYF7 251 aa9.67□□□□□ -0.86
PDGFB-201ENST00000331163 SPRR1AP35321 89 aa9.67□□□□□ -0.86
PDGFB-201ENST00000331163 MP68P56378 58 aa9.67□□□□□ -0.86
PDGFB-201ENST00000331163 IGFL1Q6UW32 110 aa9.67□□□□□ -0.86
PDGFB-201ENST00000331163 NDUFS5O43920 106 aa9.66□□□□□ -0.86
PDGFB-201ENST00000331163 CHKB-CPT1BH3BT56 60 aa9.66□□□□□ -0.86
PDGFB-201ENST00000331163 KRTAP4-16G5E9R7 235 aaPredicted RBP9.65□□□□□ -0.86
PDGFB-201ENST00000331163 IGLV5-48A0A075B6I7 105 aa9.65□□□□□ -0.87
PDGFB-201ENST00000331163 FAM229AH3BQW9 127 aa9.64□□□□□ -0.87
PDGFB-201ENST00000331163 HYDINQ4G0P3 5121 aa9.64□□□□□ -0.87
PDGFB-201ENST00000331163 SPRR4Q96PI1 79 aa9.63□□□□□ -0.87
PDGFB-201ENST00000331163 DNAH11Q96DT5 4516 aa9.63□□□□□ -0.87
PDGFB-201ENST00000331163 VPS13DQ5THJ4 4388 aa9.62□□□□□ -0.87
PDGFB-201ENST00000331163 PRR15LQ9BU68 103 aa9.61□□□□□ -0.87
PDGFB-201ENST00000331163 PRR26Q8N8Z3 221 aa9.61□□□□□ -0.87
PDGFB-201ENST00000331163 KMT2CQ8NEZ4 4911 aaKnown RBP9.6□□□□□ -0.87
PDGFB-201ENST00000331163 TYMSOSQ8TAI1 123 aa9.6□□□□□ -0.87
PDGFB-201ENST00000331163 H0Y9P7 68 aa9.57□□□□□ -0.88
PDGFB-201ENST00000331163 IGHV6-1A0A0B4J1U7 121 aa9.57□□□□□ -0.88
PDGFB-201ENST00000331163 Q1T7F1 81 aa9.56□□□□□ -0.88
PDGFB-201ENST00000331163 PCOTHQ58A44 107 aa9.56□□□□□ -0.88
PDGFB-201ENST00000331163 RETNLBQ9BQ08 111 aa9.55□□□□□ -0.88
PDGFB-201ENST00000331163 PRR15Q8IV56 129 aa9.55□□□□□ -0.88
PDGFB-201ENST00000331163 A6NED7 52 aa9.54□□□□□ -0.88
PDGFB-201ENST00000331163 A0A087X002 238 aa9.54□□□□□ -0.88
PDGFB-201ENST00000331163 CASC2Q6XLA1 102 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms