RNA–Protein interactions for RNA: ENST00000330331.9

RGPD6-202, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2 BASIC

Gene RGPD6, Length 2,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-202ENST00000330331 Q75L30 129 aa9.7□□□□□ -0.86
RGPD6-202ENST00000330331 LINC00476Q8WZB0 136 aa9.7□□□□□ -0.86
RGPD6-202ENST00000330331 FBN1P35555 2871 aaKnown RBP9.7□□□□□ -0.86
RGPD6-202ENST00000330331 IGKV2D-24A0A075B6R9 120 aa9.69□□□□□ -0.86
RGPD6-202ENST00000330331 SPANXA2-OT1Q8N9U9 137 aa9.69□□□□□ -0.86
RGPD6-202ENST00000330331 KRTAP4-16G5E9R7 235 aaPredicted RBP9.68□□□□□ -0.86
RGPD6-202ENST00000330331 COA5Q86WW8 74 aa9.68□□□□□ -0.86
RGPD6-202ENST00000330331 PHF5AQ7RTV0 110 aaKnown RBP9.67□□□□□ -0.86
RGPD6-202ENST00000330331 A0A087WSZ3 146 aa9.67□□□□□ -0.86
RGPD6-202ENST00000330331 STAB1Q9NY15 2570 aa9.65□□□□□ -0.86
RGPD6-202ENST00000330331 SPART-AS1P0CW21 52 aa9.65□□□□□ -0.86
RGPD6-202ENST00000330331 KRTAP24-1Q3LI83 254 aa9.65□□□□□ -0.86
RGPD6-202ENST00000330331 C11orf45Q8TAV5 145 aa9.65□□□□□ -0.86
RGPD6-202ENST00000330331 Q8NAQ8 132 aa9.65□□□□□ -0.86
RGPD6-202ENST00000330331 IGLV1-50A0A075B6I6 118 aa9.64□□□□□ -0.87
RGPD6-202ENST00000330331 LOC101927531A0A1B0GV80 90 aa9.64□□□□□ -0.87
RGPD6-202ENST00000330331 IGFL1Q6UW32 110 aa9.64□□□□□ -0.87
RGPD6-202ENST00000330331 KRTAP29-1A8MX34 341 aaPredicted RBP9.64□□□□□ -0.87
RGPD6-202ENST00000330331 CASC2Q6XLA1 102 aa9.64□□□□□ -0.87
RGPD6-202ENST00000330331 CDC42SE1Q9NRR8 79 aa9.64□□□□□ -0.87
RGPD6-202ENST00000330331 APOC4P55056 127 aa9.63□□□□□ -0.87
RGPD6-202ENST00000330331 MOBPQ13875 183 aa9.63□□□□□ -0.87
RGPD6-202ENST00000330331 C7orf65Q6ZTY9 151 aa9.62□□□□□ -0.87
RGPD6-202ENST00000330331 C9orf163Q8N9P6 203 aa9.62□□□□□ -0.87
RGPD6-202ENST00000330331 SPAG11AQ6PDA7 123 aa9.62□□□□□ -0.87
RGPD6-202ENST00000330331 SPRR1AP35321 89 aa9.6□□□□□ -0.87
RGPD6-202ENST00000330331 COL6A5A8TX70 2615 aa9.6□□□□□ -0.87
RGPD6-202ENST00000330331 PCOTHQ58A44 107 aa9.59□□□□□ -0.87
RGPD6-202ENST00000330331 PKD1L1Q8TDX9 2849 aa9.59□□□□□ -0.87
RGPD6-202ENST00000330331 H3BPC8 53 aa9.59□□□□□ -0.87
RGPD6-202ENST00000330331 CNBPP62633 177 aaKnown RBP9.59□□□□□ -0.87
RGPD6-202ENST00000330331 KRTAP7-1Q8IUC3 87 aa9.58□□□□□ -0.88
RGPD6-202ENST00000330331 SPINK7P58062 85 aa9.56□□□□□ -0.88
RGPD6-202ENST00000330331 IGLV7-46A0A075B6I9 117 aa9.54□□□□□ -0.88
RGPD6-202ENST00000330331 CMYA5Q8N3K9 4069 aa9.54□□□□□ -0.88
RGPD6-202ENST00000330331 C4orf48Q5BLP8 95 aa9.53□□□□□ -0.88
RGPD6-202ENST00000330331 C8orf87E5RJ46 101 aa9.52□□□□□ -0.89
RGPD6-202ENST00000330331 PLA2G2DQ9UNK4 145 aa9.52□□□□□ -0.89
RGPD6-202ENST00000330331 LINC01558Q9Y6Z2 57 aa9.52□□□□□ -0.89
RGPD6-202ENST00000330331 PRLHP81277 87 aa9.5□□□□□ -0.89
RGPD6-202ENST00000330331 REG3GQ6UW15 175 aa9.5□□□□□ -0.89
RGPD6-202ENST00000330331 IGLV5-37A0A075B6J1 123 aa9.49□□□□□ -0.89
RGPD6-202ENST00000330331 PRAC1Q96KF2 57 aa9.49□□□□□ -0.89
RGPD6-202ENST00000330331 TLX1NBP0CAT3 122 aa9.48□□□□□ -0.89
RGPD6-202ENST00000330331 A8MWP4 228 aa9.48□□□□□ -0.89
RGPD6-202ENST00000330331 H0Y9J4 135 aa9.48□□□□□ -0.89
RGPD6-202ENST00000330331 CASC10Q5T4H9 136 aa9.48□□□□□ -0.89
RGPD6-202ENST00000330331 OXLD1Q5BKU9 147 aa9.47□□□□□ -0.89
RGPD6-202ENST00000330331 PLAC8Q9NZF1 115 aa9.47□□□□□ -0.89
RGPD6-202ENST00000330331 ANK2Q01484 3957 aa9.47□□□□□ -0.89
RGPD6-202ENST00000330331 LINC00313P59037 77 aa9.44□□□□□ -0.9
RGPD6-202ENST00000330331 A0A096LNI7 61 aa9.43□□□□□ -0.9
RGPD6-202ENST00000330331 LINC00472Q9H8W2 130 aa9.43□□□□□ -0.9
RGPD6-202ENST00000330331 MMP24-AS1A0A0U1RRL7 71 aa9.42□□□□□ -0.9
RGPD6-202ENST00000330331 NOTCH1P46531 2555 aa9.42□□□□□ -0.9
RGPD6-202ENST00000330331 IGLV8-61A0A075B6I0 122 aa9.42□□□□□ -0.9
RGPD6-202ENST00000330331 LINC01556Q5JQF7 62 aa9.42□□□□□ -0.9
RGPD6-202ENST00000330331 KRTAP10-11P60412 298 aa9.41□□□□□ -0.9
RGPD6-202ENST00000330331 ADM2Q7Z4H4 148 aa9.41□□□□□ -0.9
RGPD6-202ENST00000330331 HRES1P13985 223 aa9.41□□□□□ -0.9
RGPD6-202ENST00000330331 NBEAL1Q6ZS30 2694 aa9.4□□□□□ -0.91
RGPD6-202ENST00000330331 DNAH3Q8TD57 4116 aa9.39□□□□□ -0.91
RGPD6-202ENST00000330331 SRRM2Q9UQ35 2752 aaKnown RBP9.37□□□□□ -0.91
RGPD6-202ENST00000330331 H3BNG1 76 aa9.36□□□□□ -0.91
RGPD6-202ENST00000330331 IGKV2-24A0A0C4DH68 120 aa9.35□□□□□ -0.91
RGPD6-202ENST00000330331 PRR26Q8N8Z3 221 aa9.35□□□□□ -0.91
RGPD6-202ENST00000330331 MDFIQ99750 246 aa9.34□□□□□ -0.91
RGPD6-202ENST00000330331 MGAM2Q2M2H8 2515 aa9.33□□□□□ -0.92
RGPD6-202ENST00000330331 H3BS24 57 aa9.31□□□□□ -0.92
RGPD6-202ENST00000330331 DEFB131BA0A096LNP1 70 aa9.29□□□□□ -0.92
RGPD6-202ENST00000330331 DNAH10OSP0CZ25 163 aa9.28□□□□□ -0.92
RGPD6-202ENST00000330331 TENM2Q9NT68 2774 aa9.28□□□□□ -0.92
RGPD6-202ENST00000330331 TP53AIP1Q9HCN2 124 aa9.28□□□□□ -0.92
RGPD6-202ENST00000330331 TENM3Q9P273 2699 aa9.28□□□□□ -0.92
RGPD6-202ENST00000330331 LINC01554Q52M75 96 aa9.27□□□□□ -0.92
RGPD6-202ENST00000330331 Q6ZR54 194 aa9.27□□□□□ -0.93
RGPD6-202ENST00000330331 KRTAP11-1Q8IUC1 163 aa9.27□□□□□ -0.93
RGPD6-202ENST00000330331 CSMD3Q7Z407 3707 aa9.26□□□□□ -0.93
RGPD6-202ENST00000330331 C8orf17Q9NRJ1 99 aa9.25□□□□□ -0.93
RGPD6-202ENST00000330331 IGHV6-1A0A0B4J1U7 121 aa9.23□□□□□ -0.93
RGPD6-202ENST00000330331 PLA2G1BP04054 148 aaKnown RBP9.23□□□□□ -0.93
RGPD6-202ENST00000330331 K7EIL1 84 aa9.23□□□□□ -0.93
RGPD6-202ENST00000330331 ASB16-AS1Q495Z4 193 aa9.22□□□□□ -0.93
RGPD6-202ENST00000330331 Q96NJ1 140 aa9.21□□□□□ -0.93
RGPD6-202ENST00000330331 SPRR1BP22528 89 aa9.2□□□□□ -0.94
RGPD6-202ENST00000330331 CHTF8P0CG12 524 aa9.18□□□□□ -0.94
RGPD6-202ENST00000330331 IGLV9-49A0A0B4J1Y8 123 aa9.17□□□□□ -0.94
RGPD6-202ENST00000330331 A0A087X002 238 aa9.16□□□□□ -0.94
RGPD6-202ENST00000330331 NOTCH2NLQ7Z3S9 236 aa9.16□□□□□ -0.94
RGPD6-202ENST00000330331 MRPL34Q9BQ48 92 aaKnown RBP9.15□□□□□ -0.94
RGPD6-202ENST00000330331 HUWE1Q7Z6Z7 4374 aaKnown RBP9.14□□□□□ -0.95
RGPD6-202ENST00000330331 COL7A1Q02388 2944 aa9.14□□□□□ -0.95
RGPD6-202ENST00000330331 A0A1B0GVX0 72 aa9.13□□□□□ -0.95
RGPD6-202ENST00000330331 RTL8CO15255 209 aa9.13□□□□□ -0.95
RGPD6-202ENST00000330331 DNHD1Q96M86 4753 aa9.12□□□□□ -0.95
RGPD6-202ENST00000330331 Q5W150 140 aa9.11□□□□□ -0.95
RGPD6-202ENST00000330331 DNAH1Q9P2D7 4330 aa9.1□□□□□ -0.95
RGPD6-202ENST00000330331 CDK2AP2O75956 126 aa9.1□□□□□ -0.95
RGPD6-202ENST00000330331 A0A1B0GU69 56 aa9.1□□□□□ -0.95
RGPD6-202ENST00000330331 ACYP2P14621 99 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms