RNA–Protein interactions for RNA: ENST00000326427.10

ITM2C-202, Transcript of integral membrane protein 2C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2C, Length 2,078 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-202ENST00000326427 COL6A5A8TX70 2615 aa13.73□□□□□ -0.21
ITM2C-202ENST00000326427 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.73□□□□□ -0.21
ITM2C-202ENST00000326427 KRTAP11-1Q8IUC1 163 aa13.73□□□□□ -0.21
ITM2C-202ENST00000326427 SPRR1BP22528 89 aa13.72□□□□□ -0.21
ITM2C-202ENST00000326427 UBE2AP49459 152 aa13.71□□□□□ -0.21
ITM2C-202ENST00000326427 PHF5AQ7RTV0 110 aaKnown RBP13.71□□□□□ -0.21
ITM2C-202ENST00000326427 ZCCHC13Q8WW36 166 aaKnown RBP13.71□□□□□ -0.21
ITM2C-202ENST00000326427 A0A087WSZ3 146 aa13.71□□□□□ -0.21
ITM2C-202ENST00000326427 CHTF8P0CG12 524 aa13.7□□□□□ -0.22
ITM2C-202ENST00000326427 LYSTQ99698 3801 aa13.7□□□□□ -0.22
ITM2C-202ENST00000326427 C9orf163Q8N9P6 203 aa13.67□□□□□ -0.22
ITM2C-202ENST00000326427 LINC00474Q9P2X8 69 aa13.67□□□□□ -0.22
ITM2C-202ENST00000326427 DYNC2H1Q8NCM8 4307 aaKnown RBP13.66□□□□□ -0.22
ITM2C-202ENST00000326427 DEFB116Q30KQ4 102 aa13.65□□□□□ -0.22
ITM2C-202ENST00000326427 COL7A1Q02388 2944 aa13.64□□□□□ -0.23
ITM2C-202ENST00000326427 LRCOL1A6NCL2 159 aa13.64□□□□□ -0.23
ITM2C-202ENST00000326427 PKIGQ9Y2B9 76 aa13.64□□□□□ -0.23
ITM2C-202ENST00000326427 STAB2Q8WWQ8 2551 aa13.63□□□□□ -0.23
ITM2C-202ENST00000326427 FAM229BQ4G0N7 80 aa13.63□□□□□ -0.23
ITM2C-202ENST00000326427 KRTAP29-1A8MX34 341 aaPredicted RBP13.59□□□□□ -0.23
ITM2C-202ENST00000326427 WFDC13Q8IUB5 93 aa13.58□□□□□ -0.24
ITM2C-202ENST00000326427 MGAM2Q2M2H8 2515 aa13.57□□□□□ -0.24
ITM2C-202ENST00000326427 NBDYA0A0U1RRE5 68 aa13.57□□□□□ -0.24
ITM2C-202ENST00000326427 B9D2Q9BPU9 175 aa13.57□□□□□ -0.24
ITM2C-202ENST00000326427 RPL37AP61513 92 aaKnown RBP13.56□□□□□ -0.24
ITM2C-202ENST00000326427 Q6ZRN7 208 aaPredicted RBP13.55□□□□□ -0.24
ITM2C-202ENST00000326427 KRTAP13-1Q8IUC0 172 aa13.55□□□□□ -0.24
ITM2C-202ENST00000326427 LINC00472Q9H8W2 130 aa13.55□□□□□ -0.24
ITM2C-202ENST00000326427 KRTAP21-3Q3LHN1 58 aa13.54□□□□□ -0.24
ITM2C-202ENST00000326427 hDV103S1A0JD37 113 aa13.54□□□□□ -0.24
ITM2C-202ENST00000326427 LINC00336Q6ZUF6 198 aa13.54□□□□□ -0.24
ITM2C-202ENST00000326427 PRR15Q8IV56 129 aa13.54□□□□□ -0.24
ITM2C-202ENST00000326427 PANO1I0J062 215 aa13.52□□□□□ -0.24
ITM2C-202ENST00000326427 A8MWP4 228 aa13.52□□□□□ -0.25
ITM2C-202ENST00000326427 DNAH7Q8WXX0 4024 aa13.5□□□□□ -0.25
ITM2C-202ENST00000326427 MP68P56378 58 aa13.49□□□□□ -0.25
ITM2C-202ENST00000326427 CASC2Q6XLA1 102 aa13.49□□□□□ -0.25
ITM2C-202ENST00000326427 CYP4F30PQ9H0H9 118 aa13.49□□□□□ -0.25
ITM2C-202ENST00000326427 NDUFB1O75438 58 aa13.48□□□□□ -0.25
ITM2C-202ENST00000326427 NUPR2A6NF83 97 aa13.48□□□□□ -0.25
ITM2C-202ENST00000326427 C1orf64Q8NEQ6 169 aa13.48□□□□□ -0.25
ITM2C-202ENST00000326427 MDFIQ99750 246 aa13.48□□□□□ -0.25
ITM2C-202ENST00000326427 CSMD3Q7Z407 3707 aa13.47□□□□□ -0.25
ITM2C-202ENST00000326427 SRRM2Q9UQ35 2752 aaKnown RBP13.47□□□□□ -0.25
ITM2C-202ENST00000326427 MPLKIPQ8TAP9 179 aa13.46□□□□□ -0.25
ITM2C-202ENST00000326427 PRO0628Q9UI54 55 aa13.46□□□□□ -0.26
ITM2C-202ENST00000326427 SPACA4Q8TDM5 124 aa13.45□□□□□ -0.26
ITM2C-202ENST00000326427 TRAV22A0A0B4J277 110 aa13.44□□□□□ -0.26
ITM2C-202ENST00000326427 H3BPC8 53 aa13.42□□□□□ -0.26
ITM2C-202ENST00000326427 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.41□□□□□ -0.26
ITM2C-202ENST00000326427 PLECQ15149 4684 aaKnown RBP13.41□□□□□ -0.26
ITM2C-202ENST00000326427 LINC00208Q96KT6 92 aa13.4□□□□□ -0.26
ITM2C-202ENST00000326427 H0Y9P7 68 aa13.39□□□□□ -0.27
ITM2C-202ENST00000326427 TENM2Q9NT68 2774 aa13.39□□□□□ -0.27
ITM2C-202ENST00000326427 LINC00483Q53H64 154 aa13.37□□□□□ -0.27
ITM2C-202ENST00000326427 MMP24-AS1A0A0U1RRL7 71 aa13.36□□□□□ -0.27
ITM2C-202ENST00000326427 Q96NJ1 140 aa13.35□□□□□ -0.27
ITM2C-202ENST00000326427 Q1T7F1 81 aa13.34□□□□□ -0.27
ITM2C-202ENST00000326427 DNHD1Q96M86 4753 aa13.34□□□□□ -0.27
ITM2C-202ENST00000326427 PRR4Q16378 134 aa13.33□□□□□ -0.27
ITM2C-202ENST00000326427 A0A087WTM6 91 aa13.33□□□□□ -0.28
ITM2C-202ENST00000326427 SPANXA2-OT1Q8N9U9 137 aa13.33□□□□□ -0.28
ITM2C-202ENST00000326427 IGLV9-49A0A0B4J1Y8 123 aa13.32□□□□□ -0.28
ITM2C-202ENST00000326427 VPS13DQ5THJ4 4388 aa13.32□□□□□ -0.28
ITM2C-202ENST00000326427 ASB16-AS1Q495Z4 193 aa13.28□□□□□ -0.28
ITM2C-202ENST00000326427 ZNF706Q9Y5V0 76 aaPredicted RBP13.28□□□□□ -0.28
ITM2C-202ENST00000326427 BRK1Q8WUW1 75 aa13.27□□□□□ -0.29
ITM2C-202ENST00000326427 IGLV5-52A0A0A0MRZ9 124 aa13.25□□□□□ -0.29
ITM2C-202ENST00000326427 WWC2-AS2Q96NR7 200 aa13.25□□□□□ -0.29
ITM2C-202ENST00000326427 RTL8CO15255 209 aa13.24□□□□□ -0.29
ITM2C-202ENST00000326427 MOBPQ13875 183 aa13.24□□□□□ -0.29
ITM2C-202ENST00000326427 PSORS1C2Q9UIG4 136 aa13.24□□□□□ -0.29
ITM2C-202ENST00000326427 PLAC8Q9NZF1 115 aa13.22□□□□□ -0.29
ITM2C-202ENST00000326427 STARD9Q9P2P6 4700 aa13.21□□□□□ -0.29
ITM2C-202ENST00000326427 TP53AIP1Q9HCN2 124 aa13.2□□□□□ -0.3
ITM2C-202ENST00000326427 C8orf17Q9NRJ1 99 aa13.2□□□□□ -0.3
ITM2C-202ENST00000326427 PRKDCP78527 4128 aaKnown RBP13.19□□□□□ -0.3
ITM2C-202ENST00000326427 Q6ZR54 194 aa13.19□□□□□ -0.3
ITM2C-202ENST00000326427 HECTD4Q9Y4D8 3996 aa13.18□□□□□ -0.3
ITM2C-202ENST00000326427 ZNF861PO60384 105 aa13.17□□□□□ -0.3
ITM2C-202ENST00000326427 A0A1B0GVX0 72 aa13.16□□□□□ -0.3
ITM2C-202ENST00000326427 V9GYY9 64 aa13.14□□□□□ -0.31
ITM2C-202ENST00000326427 DNAH17Q9UFH2 4485 aa13.14□□□□□ -0.31
ITM2C-202ENST00000326427 DNAH8Q96JB1 4490 aa13.12□□□□□ -0.31
ITM2C-202ENST00000326427 IGLV7-46A0A075B6I9 117 aa13.11□□□□□ -0.31
ITM2C-202ENST00000326427 ANAPC11Q9NYG5 84 aa13.11□□□□□ -0.31
ITM2C-202ENST00000326427 IGHV6-1A0A0B4J1U7 121 aa13.09□□□□□ -0.31
ITM2C-202ENST00000326427 PSPHP1O15172 72 aa13.09□□□□□ -0.31
ITM2C-202ENST00000326427 CDK2AP2O75956 126 aa13.07□□□□□ -0.32
ITM2C-202ENST00000326427 DNAH2Q9P225 4427 aa13.06□□□□□ -0.32
ITM2C-202ENST00000326427 MRPL34Q9BQ48 92 aaKnown RBP13.05□□□□□ -0.32
ITM2C-202ENST00000326427 FRAS1Q86XX4 4008 aa13.04□□□□□ -0.32
ITM2C-202ENST00000326427 CD164Q04900 197 aa13.03□□□□□ -0.32
ITM2C-202ENST00000326427 KMT2AQ03164 3969 aa13.03□□□□□ -0.32
ITM2C-202ENST00000326427 C1orf195Q5TG92 126 aa13.02□□□□□ -0.33
ITM2C-202ENST00000326427 Q8N9P0 234 aaPredicted RBP13.02□□□□□ -0.33
ITM2C-202ENST00000326427 A8MUN3 132 aa13.01□□□□□ -0.33
ITM2C-202ENST00000326427 IGLV7-43P04211 117 aa13.01□□□□□ -0.33
ITM2C-202ENST00000326427 NDUFS5O43920 106 aa13.01□□□□□ -0.33
ITM2C-202ENST00000326427 PCOTHQ58A44 107 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms