RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 ELOF1P60002 83 aaKnown RBP6.66□□□□□ -1.34
ABCF1-201ENST00000326195 LINC01556Q5JQF7 62 aa6.66□□□□□ -1.34
ABCF1-201ENST00000326195 CD164Q04900 197 aa6.66□□□□□ -1.34
ABCF1-201ENST00000326195 ST20-AS1Q8NBB2 130 aa6.66□□□□□ -1.34
ABCF1-201ENST00000326195 ZCCHC13Q8WW36 166 aaKnown RBP6.65□□□□□ -1.34
ABCF1-201ENST00000326195 LCE6AA0A183 80 aa6.64□□□□□ -1.35
ABCF1-201ENST00000326195 C15orf56Q8N910 161 aa6.64□□□□□ -1.35
ABCF1-201ENST00000326195 HYDINQ4G0P3 5121 aa6.64□□□□□ -1.35
ABCF1-201ENST00000326195 IGKV2-24A0A0C4DH68 120 aa6.63□□□□□ -1.35
ABCF1-201ENST00000326195 Q5VV11 94 aa6.63□□□□□ -1.35
ABCF1-201ENST00000326195 C1orf134Q5TEV5 83 aa6.62□□□□□ -1.35
ABCF1-201ENST00000326195 C7orf33Q8WU49 177 aa6.62□□□□□ -1.35
ABCF1-201ENST00000326195 LINC00528Q8N1L1 170 aa6.61□□□□□ -1.35
ABCF1-201ENST00000326195 RBM12B-AS1Q9P1G2 102 aa6.61□□□□□ -1.35
ABCF1-201ENST00000326195 DHRS4-AS1Q9P1J3 65 aa6.61□□□□□ -1.35
ABCF1-201ENST00000326195 TNP2Q05952 138 aa6.6□□□□□ -1.35
ABCF1-201ENST00000326195 C16orf90A8MZG2 172 aa6.6□□□□□ -1.35
ABCF1-201ENST00000326195 DEFB116Q30KQ4 102 aa6.59□□□□□ -1.35
ABCF1-201ENST00000326195 SERTAD4-AS1Q5TG53 156 aa6.59□□□□□ -1.35
ABCF1-201ENST00000326195 K7EQZ3 153 aa6.59□□□□□ -1.36
ABCF1-201ENST00000326195 A0A1W2PNM2 257 aa6.58□□□□□ -1.36
ABCF1-201ENST00000326195 DSCR10P59022 87 aa6.58□□□□□ -1.36
ABCF1-201ENST00000326195 Q8N377 158 aa6.58□□□□□ -1.36
ABCF1-201ENST00000326195 SPTSSBQ8NFR3 76 aa6.58□□□□□ -1.36
ABCF1-201ENST00000326195 CYP4F30PQ9H0H9 118 aa6.57□□□□□ -1.36
ABCF1-201ENST00000326195 C1orf137Q5JT78 98 aa6.57□□□□□ -1.36
ABCF1-201ENST00000326195 SRRM2Q9UQ35 2752 aaKnown RBP6.56□□□□□ -1.36
ABCF1-201ENST00000326195 FAM168BA1KXE4 195 aa6.56□□□□□ -1.36
ABCF1-201ENST00000326195 CHKB-CPT1BH3BT56 60 aa6.56□□□□□ -1.36
ABCF1-201ENST00000326195 LCA10Q71F78 164 aa6.56□□□□□ -1.36
ABCF1-201ENST00000326195 VPS13DQ5THJ4 4388 aa6.56□□□□□ -1.36
ABCF1-201ENST00000326195 MRPL55Q7Z7F7 128 aaKnown RBP6.56□□□□□ -1.36
ABCF1-201ENST00000326195 CHTF8P0CG12 524 aa6.55□□□□□ -1.36
ABCF1-201ENST00000326195 KTN1-AS1Q86SY8 53 aa6.55□□□□□ -1.36
ABCF1-201ENST00000326195 KCNQ1DNQ9H478 68 aa6.55□□□□□ -1.36
ABCF1-201ENST00000326195 DNAH1Q9P2D7 4330 aa6.54□□□□□ -1.36
ABCF1-201ENST00000326195 A0A0G2JQZ4 141 aa6.54□□□□□ -1.36
ABCF1-201ENST00000326195 A0A1W2PNN7 141 aa6.54□□□□□ -1.36
ABCF1-201ENST00000326195 KRTAP26-1Q6PEX3 210 aa6.54□□□□□ -1.36
ABCF1-201ENST00000326195 Q8N9P0 234 aaPredicted RBP6.54□□□□□ -1.36
ABCF1-201ENST00000326195 Q6ZRX8 168 aa6.54□□□□□ -1.36
ABCF1-201ENST00000326195 FRAS1Q86XX4 4008 aa6.54□□□□□ -1.36
ABCF1-201ENST00000326195 SACSQ9NZJ4 4579 aa6.53□□□□□ -1.36
ABCF1-201ENST00000326195 IGLV5-48A0A075B6I7 105 aa6.53□□□□□ -1.36
ABCF1-201ENST00000326195 HCG22E2RYF7 251 aa6.53□□□□□ -1.36
ABCF1-201ENST00000326195 REG3GQ6UW15 175 aa6.52□□□□□ -1.37
ABCF1-201ENST00000326195 PRR15LQ9BU68 103 aa6.52□□□□□ -1.37
ABCF1-201ENST00000326195 RTL8CO15255 209 aa6.52□□□□□ -1.37
ABCF1-201ENST00000326195 KRTAP10-2P60368 255 aa6.51□□□□□ -1.37
ABCF1-201ENST00000326195 A0A087WTM6 91 aa6.5□□□□□ -1.37
ABCF1-201ENST00000326195 RYR3Q15413 4870 aa6.5□□□□□ -1.37
ABCF1-201ENST00000326195 IGLV1-50A0A075B6I6 118 aa6.5□□□□□ -1.37
ABCF1-201ENST00000326195 A0A096LNI7 61 aa6.5□□□□□ -1.37
ABCF1-201ENST00000326195 PRLHP81277 87 aa6.5□□□□□ -1.37
ABCF1-201ENST00000326195 Q6ZR54 194 aa6.5□□□□□ -1.37
ABCF1-201ENST00000326195 IGLV5-52A0A0A0MRZ9 124 aa6.49□□□□□ -1.37
ABCF1-201ENST00000326195 WFDC13Q8IUB5 93 aa6.49□□□□□ -1.37
ABCF1-201ENST00000326195 UBE2AP49459 152 aa6.49□□□□□ -1.37
ABCF1-201ENST00000326195 LINC00208Q96KT6 92 aa6.49□□□□□ -1.37
ABCF1-201ENST00000326195 DNAH2Q9P225 4427 aa6.49□□□□□ -1.37
ABCF1-201ENST00000326195 A6NN06 94 aa6.48□□□□□ -1.37
ABCF1-201ENST00000326195 TLX1NBP0CAT3 122 aa6.48□□□□□ -1.37
ABCF1-201ENST00000326195 C14orf177Q52M58 125 aa6.47□□□□□ -1.37
ABCF1-201ENST00000326195 Q9BRP9 147 aa6.47□□□□□ -1.37
ABCF1-201ENST00000326195 Q8NBF4 154 aa6.47□□□□□ -1.37
ABCF1-201ENST00000326195 FLG2Q5D862 2391 aaPredicted RBP6.46□□□□□ -1.37
ABCF1-201ENST00000326195 Q6ZRN7 208 aaPredicted RBP6.46□□□□□ -1.38
ABCF1-201ENST00000326195 A6NED7 52 aa6.45□□□□□ -1.38
ABCF1-201ENST00000326195 RPL37AP61513 92 aaKnown RBP6.45□□□□□ -1.38
ABCF1-201ENST00000326195 PLA2G2DQ9UNK4 145 aa6.45□□□□□ -1.38
ABCF1-201ENST00000326195 SMR3BP02814 79 aaPredicted RBP6.45□□□□□ -1.38
ABCF1-201ENST00000326195 DYNC2H1Q8NCM8 4307 aaKnown RBP6.45□□□□□ -1.38
ABCF1-201ENST00000326195 A0A087WSZ3 146 aa6.44□□□□□ -1.38
ABCF1-201ENST00000326195 ATP11AUNQ6ZP68 121 aa6.44□□□□□ -1.38
ABCF1-201ENST00000326195 SPRR4Q96PI1 79 aa6.44□□□□□ -1.38
ABCF1-201ENST00000326195 PANO1I0J062 215 aa6.44□□□□□ -1.38
ABCF1-201ENST00000326195 LIMD2Q9BT23 127 aa6.44□□□□□ -1.38
ABCF1-201ENST00000326195 NDUFB1O75438 58 aa6.43□□□□□ -1.38
ABCF1-201ENST00000326195 PHF5AQ7RTV0 110 aaKnown RBP6.43□□□□□ -1.38
ABCF1-201ENST00000326195 DNAH11Q96DT5 4516 aa6.43□□□□□ -1.38
ABCF1-201ENST00000326195 RYR2Q92736 4967 aa6.42□□□□□ -1.38
ABCF1-201ENST00000326195 A0A1B0GW54 56 aa6.42□□□□□ -1.38
ABCF1-201ENST00000326195 PKHD1P08F94 4074 aa6.41□□□□□ -1.38
ABCF1-201ENST00000326195 MP68P56378 58 aa6.41□□□□□ -1.38
ABCF1-201ENST00000326195 Q75L30 129 aa6.41□□□□□ -1.38
ABCF1-201ENST00000326195 MOBPQ13875 183 aa6.41□□□□□ -1.38
ABCF1-201ENST00000326195 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.41□□□□□ -1.38
ABCF1-201ENST00000326195 IGLV5-37A0A075B6J1 123 aa6.4□□□□□ -1.39
ABCF1-201ENST00000326195 H0Y9J4 135 aa6.4□□□□□ -1.39
ABCF1-201ENST00000326195 DNAH6Q9C0G6 4158 aa6.4□□□□□ -1.39
ABCF1-201ENST00000326195 KRTAP4-16G5E9R7 235 aaPredicted RBP6.4□□□□□ -1.39
ABCF1-201ENST00000326195 H0Y9P7 68 aa6.4□□□□□ -1.39
ABCF1-201ENST00000326195 LOC101927531A0A1B0GV80 90 aa6.38□□□□□ -1.39
ABCF1-201ENST00000326195 NDUFS5O43920 106 aa6.38□□□□□ -1.39
ABCF1-201ENST00000326195 C4orf48Q5BLP8 95 aa6.38□□□□□ -1.39
ABCF1-201ENST00000326195 COA5Q86WW8 74 aa6.38□□□□□ -1.39
ABCF1-201ENST00000326195 SPRR1AP35321 89 aa6.38□□□□□ -1.39
ABCF1-201ENST00000326195 KRTAP10-1P60331 282 aa6.38□□□□□ -1.39
ABCF1-201ENST00000326195 KRTAP29-1A8MX34 341 aaPredicted RBP6.38□□□□□ -1.39
ABCF1-201ENST00000326195 SPANXA2-OT1Q8N9U9 137 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms