RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 TGP01266 2768 aa6.71□□□□□ -1.34
SF3B2-201ENST00000322535 GYPEP15421 78 aa6.7□□□□□ -1.34
SF3B2-201ENST00000322535 SPAG11BQ08648 103 aa6.7□□□□□ -1.34
SF3B2-201ENST00000322535 H3BQ85 93 aa6.7□□□□□ -1.34
SF3B2-201ENST00000322535 LINC00476Q8WZB0 136 aa6.7□□□□□ -1.34
SF3B2-201ENST00000322535 MEGF8Q7Z7M0 2845 aa6.7□□□□□ -1.34
SF3B2-201ENST00000322535 EGFEM1PQ0D2K5 195 aa6.69□□□□□ -1.34
SF3B2-201ENST00000322535 WFDC10BQ8IUB3 73 aa6.69□□□□□ -1.34
SF3B2-201ENST00000322535 A0A0J9YWU9 116 aa6.68□□□□□ -1.34
SF3B2-201ENST00000322535 K7EIL1 84 aa6.68□□□□□ -1.34
SF3B2-201ENST00000322535 ELOF1P60002 83 aaKnown RBP6.68□□□□□ -1.34
SF3B2-201ENST00000322535 RETNLBQ9BQ08 111 aa6.68□□□□□ -1.34
SF3B2-201ENST00000322535 HUWE1Q7Z6Z7 4374 aaKnown RBP6.67□□□□□ -1.34
SF3B2-201ENST00000322535 CASC2Q6XLA1 102 aa6.67□□□□□ -1.34
SF3B2-201ENST00000322535 NDUFB1O75438 58 aa6.66□□□□□ -1.34
SF3B2-201ENST00000322535 PLA2G1BP04054 148 aaKnown RBP6.66□□□□□ -1.34
SF3B2-201ENST00000322535 KPRPQ5T749 579 aaPredicted RBP6.66□□□□□ -1.34
SF3B2-201ENST00000322535 Q9BRP9 147 aa6.66□□□□□ -1.34
SF3B2-201ENST00000322535 A0A0A0MQY5 61 aa6.66□□□□□ -1.34
SF3B2-201ENST00000322535 REG3AQ06141 175 aa6.66□□□□□ -1.34
SF3B2-201ENST00000322535 PRKDCP78527 4128 aaKnown RBP6.66□□□□□ -1.34
SF3B2-201ENST00000322535 H0Y9J4 135 aa6.66□□□□□ -1.34
SF3B2-201ENST00000322535 SPAG11AQ6PDA7 123 aa6.65□□□□□ -1.34
SF3B2-201ENST00000322535 SPART-AS1P0CW21 52 aa6.65□□□□□ -1.35
SF3B2-201ENST00000322535 DSCR10P59022 87 aa6.64□□□□□ -1.35
SF3B2-201ENST00000322535 COA5Q86WW8 74 aa6.63□□□□□ -1.35
SF3B2-201ENST00000322535 PRO0255Q9UI72 69 aa6.63□□□□□ -1.35
SF3B2-201ENST00000322535 A0A0G2JQZ4 141 aa6.63□□□□□ -1.35
SF3B2-201ENST00000322535 A0A1W2PNM2 257 aa6.63□□□□□ -1.35
SF3B2-201ENST00000322535 A0A1W2PNN7 141 aa6.63□□□□□ -1.35
SF3B2-201ENST00000322535 LINC00528Q8N1L1 170 aa6.61□□□□□ -1.35
SF3B2-201ENST00000322535 A0A1B0GUV1 79 aa6.61□□□□□ -1.35
SF3B2-201ENST00000322535 C1orf137Q5JT78 98 aa6.61□□□□□ -1.35
SF3B2-201ENST00000322535 Q8N377 158 aa6.6□□□□□ -1.35
SF3B2-201ENST00000322535 PLAC8Q9NZF1 115 aa6.6□□□□□ -1.35
SF3B2-201ENST00000322535 C6orf48Q9UBA6 75 aa6.6□□□□□ -1.35
SF3B2-201ENST00000322535 LINC01558Q9Y6Z2 57 aa6.6□□□□□ -1.35
SF3B2-201ENST00000322535 H0Y9P7 68 aa6.6□□□□□ -1.35
SF3B2-201ENST00000322535 DNAH9Q9NYC9 4486 aa6.59□□□□□ -1.35
SF3B2-201ENST00000322535 CSAG1Q6PB30 78 aa6.59□□□□□ -1.35
SF3B2-201ENST00000322535 SPANXA2-OT1Q8N9U9 137 aa6.59□□□□□ -1.36
SF3B2-201ENST00000322535 DNAH7Q8WXX0 4024 aa6.58□□□□□ -1.36
SF3B2-201ENST00000322535 RPL37AP61513 92 aaKnown RBP6.58□□□□□ -1.36
SF3B2-201ENST00000322535 KCNQ1DNQ9H478 68 aa6.58□□□□□ -1.36
SF3B2-201ENST00000322535 DEFB131BA0A096LNP1 70 aa6.57□□□□□ -1.36
SF3B2-201ENST00000322535 PCOTHQ58A44 107 aa6.57□□□□□ -1.36
SF3B2-201ENST00000322535 Q6ZR54 194 aa6.57□□□□□ -1.36
SF3B2-201ENST00000322535 C1orf134Q5TEV5 83 aa6.56□□□□□ -1.36
SF3B2-201ENST00000322535 FBN3Q75N90 2809 aa6.56□□□□□ -1.36
SF3B2-201ENST00000322535 C7orf33Q8WU49 177 aa6.55□□□□□ -1.36
SF3B2-201ENST00000322535 CAMK2N2Q96S95 79 aa6.55□□□□□ -1.36
SF3B2-201ENST00000322535 RTL8CO15255 209 aa6.55□□□□□ -1.36
SF3B2-201ENST00000322535 Q8NBF4 154 aa6.54□□□□□ -1.36
SF3B2-201ENST00000322535 RPL37AP8A6NKH3 93 aa6.54□□□□□ -1.36
SF3B2-201ENST00000322535 IGLV5-48A0A075B6I7 105 aa6.53□□□□□ -1.36
SF3B2-201ENST00000322535 CNBPP62633 177 aaKnown RBP6.52□□□□□ -1.37
SF3B2-201ENST00000322535 IGHV6-1A0A0B4J1U7 121 aa6.51□□□□□ -1.37
SF3B2-201ENST00000322535 C9orf163Q8N9P6 203 aa6.51□□□□□ -1.37
SF3B2-201ENST00000322535 IGKV2D-24A0A075B6R9 120 aa6.5□□□□□ -1.37
SF3B2-201ENST00000322535 DNAH10Q8IVF4 4471 aa6.5□□□□□ -1.37
SF3B2-201ENST00000322535 STARD9Q9P2P6 4700 aa6.49□□□□□ -1.37
SF3B2-201ENST00000322535 IGLV1-50A0A075B6I6 118 aa6.49□□□□□ -1.37
SF3B2-201ENST00000322535 PLECQ15149 4684 aaKnown RBP6.48□□□□□ -1.37
SF3B2-201ENST00000322535 A0A087WSZ3 146 aa6.48□□□□□ -1.37
SF3B2-201ENST00000322535 LELP1Q5T871 98 aa6.47□□□□□ -1.37
SF3B2-201ENST00000322535 ROMO1P60602 79 aa6.46□□□□□ -1.38
SF3B2-201ENST00000322535 ASB16-AS1Q495Z4 193 aa6.46□□□□□ -1.38
SF3B2-201ENST00000322535 IGLV7-46A0A075B6I9 117 aa6.45□□□□□ -1.38
SF3B2-201ENST00000322535 GVQW2A0A096LPI5 108 aaPredicted RBP6.45□□□□□ -1.38
SF3B2-201ENST00000322535 SPRR4Q96PI1 79 aa6.45□□□□□ -1.38
SF3B2-201ENST00000322535 SRRM2Q9UQ35 2752 aaKnown RBP6.43□□□□□ -1.38
SF3B2-201ENST00000322535 KMT2AQ03164 3969 aa6.43□□□□□ -1.38
SF3B2-201ENST00000322535 TNP2Q05952 138 aa6.42□□□□□ -1.38
SF3B2-201ENST00000322535 A0A1B0GW54 56 aa6.42□□□□□ -1.38
SF3B2-201ENST00000322535 Q6ZRX8 168 aa6.42□□□□□ -1.38
SF3B2-201ENST00000322535 DHRS4-AS1Q9P1J3 65 aa6.42□□□□□ -1.38
SF3B2-201ENST00000322535 FAM168BA1KXE4 195 aa6.41□□□□□ -1.38
SF3B2-201ENST00000322535 CASC10Q5T4H9 136 aa6.4□□□□□ -1.38
SF3B2-201ENST00000322535 DNAH1Q9P2D7 4330 aa6.4□□□□□ -1.38
SF3B2-201ENST00000322535 KRTAP29-1A8MX34 341 aaPredicted RBP6.4□□□□□ -1.39
SF3B2-201ENST00000322535 IGFL1Q6UW32 110 aa6.39□□□□□ -1.39
SF3B2-201ENST00000322535 H3BPC8 53 aa6.39□□□□□ -1.39
SF3B2-201ENST00000322535 HRES1P13985 223 aa6.39□□□□□ -1.39
SF3B2-201ENST00000322535 A0A096LNI7 61 aa6.38□□□□□ -1.39
SF3B2-201ENST00000322535 H3BNG1 76 aa6.38□□□□□ -1.39
SF3B2-201ENST00000322535 P0C880 135 aa6.38□□□□□ -1.39
SF3B2-201ENST00000322535 UBE2DNLQ8IWF7 75 aa6.37□□□□□ -1.39
SF3B2-201ENST00000322535 KRTAP1-5Q9BYS1 174 aa6.37□□□□□ -1.39
SF3B2-201ENST00000322535 PRR34Q9NV39 138 aa6.37□□□□□ -1.39
SF3B2-201ENST00000322535 IGLV5-37A0A075B6J1 123 aa6.36□□□□□ -1.39
SF3B2-201ENST00000322535 MIR22HGQ0VDD5 57 aa6.36□□□□□ -1.39
SF3B2-201ENST00000322535 A0A087X002 238 aa6.35□□□□□ -1.39
SF3B2-201ENST00000322535 REG3GQ6UW15 175 aa6.35□□□□□ -1.39
SF3B2-201ENST00000322535 C15orf56Q8N910 161 aa6.35□□□□□ -1.39
SF3B2-201ENST00000322535 LINC01556Q5JQF7 62 aa6.34□□□□□ -1.39
SF3B2-201ENST00000322535 APLNQ9ULZ1 77 aa6.33□□□□□ -1.4
SF3B2-201ENST00000322535 KRTAP26-1Q6PEX3 210 aa6.32□□□□□ -1.4
SF3B2-201ENST00000322535 DNAH10OSP0CZ25 163 aa6.32□□□□□ -1.4
SF3B2-201ENST00000322535 SPATA8Q6RVD6 105 aa6.32□□□□□ -1.4
SF3B2-201ENST00000322535 PRLHP81277 87 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms