RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 H3BT86 120 aa8.11□□□□□ -1.11
PRPF18-201ENST00000320054 UBE2V1Q13404 147 aa8.11□□□□□ -1.11
PRPF18-201ENST00000320054 SMIM29Q86T20 159 aa8.11□□□□□ -1.11
PRPF18-201ENST00000320054 LINC01600Q96MT4 127 aa8.1□□□□□ -1.11
PRPF18-201ENST00000320054 KRTAP4-5Q9BYR2 181 aa8.1□□□□□ -1.11
PRPF18-201ENST00000320054 LAMTOR3Q9UHA4 124 aa8.1□□□□□ -1.11
PRPF18-201ENST00000320054 ANAPC11Q9NYG5 84 aa8.09□□□□□ -1.11
PRPF18-201ENST00000320054 PRO0461Q9UI25 63 aa8.09□□□□□ -1.11
PRPF18-201ENST00000320054 NDUFV3P56181 108 aaKnown RBP8.08□□□□□ -1.12
PRPF18-201ENST00000320054 ANKRD29Q8N6D5 301 aa8.08□□□□□ -1.12
PRPF18-201ENST00000320054 CRYGAP11844 174 aa8.07□□□□□ -1.12
PRPF18-201ENST00000320054 MTURNQ8N3F0 131 aa8.07□□□□□ -1.12
PRPF18-201ENST00000320054 C3orf22Q8N5N4 141 aa8.07□□□□□ -1.12
PRPF18-201ENST00000320054 A0A087X002 238 aa8.06□□□□□ -1.12
PRPF18-201ENST00000320054 F8W1H4 67 aa8.06□□□□□ -1.12
PRPF18-201ENST00000320054 F8WEM9 126 aa8.06□□□□□ -1.12
PRPF18-201ENST00000320054 SMCPP49901 116 aaPredicted RBP8.06□□□□□ -1.12
PRPF18-201ENST00000320054 IGLV8-61A0A075B6I0 122 aa8.05□□□□□ -1.12
PRPF18-201ENST00000320054 FLG2Q5D862 2391 aaPredicted RBP8.05□□□□□ -1.12
PRPF18-201ENST00000320054 KRTAP13-2Q52LG2 175 aa8.04□□□□□ -1.12
PRPF18-201ENST00000320054 IGLV9-49A0A0B4J1Y8 123 aa8.03□□□□□ -1.12
PRPF18-201ENST00000320054 Q8NBF4 154 aa8.03□□□□□ -1.12
PRPF18-201ENST00000320054 JMJD7-PLA2G4BH0Y9G9 81 aa8.02□□□□□ -1.13
PRPF18-201ENST00000320054 SSBP3-AS1Q7Z2R9 100 aa8.02□□□□□ -1.13
PRPF18-201ENST00000320054 PRR26Q8N8Z3 221 aa8.02□□□□□ -1.13
PRPF18-201ENST00000320054 MOBPQ13875 183 aa8.01□□□□□ -1.13
PRPF18-201ENST00000320054 C9orf153Q5TBE3 101 aa8.01□□□□□ -1.13
PRPF18-201ENST00000320054 OBSCN-AS1Q96MR7 158 aa8.01□□□□□ -1.13
PRPF18-201ENST00000320054 OXTP01178 125 aa8□□□□□ -1.13
PRPF18-201ENST00000320054 RBM3P98179 157 aaKnown RBP8□□□□□ -1.13
PRPF18-201ENST00000320054 Q6JHZ5 121 aa8□□□□□ -1.13
PRPF18-201ENST00000320054 TYMSOSQ8TAI1 123 aa7.99□□□□□ -1.13
PRPF18-201ENST00000320054 KRTAP10-8P60410 259 aa7.98□□□□□ -1.13
PRPF18-201ENST00000320054 TRBV7-4A0A0J9YYF1 115 aa7.97□□□□□ -1.13
PRPF18-201ENST00000320054 TEN1Q86WV5 123 aa7.97□□□□□ -1.13
PRPF18-201ENST00000320054 A0A1B0GV72 72 aa7.96□□□□□ -1.14
PRPF18-201ENST00000320054 KRTAP29-1A8MX34 341 aaPredicted RBP7.96□□□□□ -1.14
PRPF18-201ENST00000320054 IGFL1Q6UW32 110 aa7.96□□□□□ -1.14
PRPF18-201ENST00000320054 DSCR8Q96T75 97 aa7.96□□□□□ -1.14
PRPF18-201ENST00000320054 FAT3Q8TDW7 4589 aa7.96□□□□□ -1.14
PRPF18-201ENST00000320054 PDE6GP18545 87 aa7.95□□□□□ -1.14
PRPF18-201ENST00000320054 ETDBQ3ZM63 59 aa7.95□□□□□ -1.14
PRPF18-201ENST00000320054 ABCA13Q86UQ4 5058 aa7.95□□□□□ -1.14
PRPF18-201ENST00000320054 LRP1Q07954 4544 aaKnown RBP7.95□□□□□ -1.14
PRPF18-201ENST00000320054 LOC110117498A0A087WWA1 95 aa7.94□□□□□ -1.14
PRPF18-201ENST00000320054 MT1HL1P0DM35 61 aa7.93□□□□□ -1.14
PRPF18-201ENST00000320054 CD164Q04900 197 aa7.93□□□□□ -1.14
PRPF18-201ENST00000320054 C21orf62-AS1Q17RA5 79 aa7.93□□□□□ -1.14
PRPF18-201ENST00000320054 C14orf132Q9NPU4 83 aa7.93□□□□□ -1.14
PRPF18-201ENST00000320054 MYCBP2O75592 4640 aa7.93□□□□□ -1.14
PRPF18-201ENST00000320054 A0A0G2JQZ4 141 aa7.91□□□□□ -1.14
PRPF18-201ENST00000320054 SPAG11AQ6PDA7 123 aa7.91□□□□□ -1.14
PRPF18-201ENST00000320054 Q6Q795 121 aa7.91□□□□□ -1.14
PRPF18-201ENST00000320054 Q6ZQT0 140 aa7.91□□□□□ -1.14
PRPF18-201ENST00000320054 LINC00304Q8N9R0 145 aa7.91□□□□□ -1.14
PRPF18-201ENST00000320054 A0A1W2PNM2 257 aa7.89□□□□□ -1.15
PRPF18-201ENST00000320054 CCKP06307 115 aa7.89□□□□□ -1.15
PRPF18-201ENST00000320054 C4orf48Q5BLP8 95 aa7.89□□□□□ -1.15
PRPF18-201ENST00000320054 A0A1B0GW54 56 aa7.87□□□□□ -1.15
PRPF18-201ENST00000320054 SPINK1P00995 79 aa7.87□□□□□ -1.15
PRPF18-201ENST00000320054 TNXBP22105 4242 aa7.87□□□□□ -1.15
PRPF18-201ENST00000320054 TRBV7-7A0A0K0K1E9 115 aa7.86□□□□□ -1.15
PRPF18-201ENST00000320054 RPS29P62273 56 aaKnown RBP7.86□□□□□ -1.15
PRPF18-201ENST00000320054 HRCT1Q6UXD1 115 aa7.85□□□□□ -1.15
PRPF18-201ENST00000320054 VPS25Q9BRG1 176 aa7.85□□□□□ -1.15
PRPF18-201ENST00000320054 DMBT1Q9UGM3 2413 aaPredicted RBP7.83□□□□□ -1.16
PRPF18-201ENST00000320054 J3QL48 77 aa7.83□□□□□ -1.16
PRPF18-201ENST00000320054 Q5XG85 94 aa7.83□□□□□ -1.16
PRPF18-201ENST00000320054 LIMD2Q9BT23 127 aa7.82□□□□□ -1.16
PRPF18-201ENST00000320054 A0A087WSZ3 146 aa7.8□□□□□ -1.16
PRPF18-201ENST00000320054 SS18L2Q9UHA2 77 aa7.8□□□□□ -1.16
PRPF18-201ENST00000320054 ASB16-AS1Q495Z4 193 aa7.79□□□□□ -1.16
PRPF18-201ENST00000320054 PCLOQ9Y6V0 5065 aa7.78□□□□□ -1.16
PRPF18-201ENST00000320054 FAM240AA0A1B0GVK7 77 aa7.76□□□□□ -1.17
PRPF18-201ENST00000320054 ACYP1P07311 99 aa7.76□□□□□ -1.17
PRPF18-201ENST00000320054 J3QR89 54 aa7.75□□□□□ -1.17
PRPF18-201ENST00000320054 LINC00846Q9NV44 126 aa7.73□□□□□ -1.17
PRPF18-201ENST00000320054 NREPQ16612 68 aa7.71□□□□□ -1.18
PRPF18-201ENST00000320054 C1orf195Q5TG92 126 aa7.71□□□□□ -1.18
PRPF18-201ENST00000320054 LINC00472Q9H8W2 130 aa7.71□□□□□ -1.18
PRPF18-201ENST00000320054 Q96NJ1 140 aa7.7□□□□□ -1.18
PRPF18-201ENST00000320054 UBL5Q9BZL1 73 aa7.7□□□□□ -1.18
PRPF18-201ENST00000320054 K7ERU9 68 aa7.69□□□□□ -1.18
PRPF18-201ENST00000320054 Q6ZVQ6 151 aa7.69□□□□□ -1.18
PRPF18-201ENST00000320054 J3KT08 172 aa7.66□□□□□ -1.18
PRPF18-201ENST00000320054 FP248Q71RG6 208 aaPredicted RBP7.66□□□□□ -1.18
PRPF18-201ENST00000320054 RETNLBQ9BQ08 111 aa7.66□□□□□ -1.18
PRPF18-201ENST00000320054 IGKV4-1P06312 121 aa7.64□□□□□ -1.19
PRPF18-201ENST00000320054 BPY2O14599 106 aa7.62□□□□□ -1.19
PRPF18-201ENST00000320054 DEFB116Q30KQ4 102 aa7.62□□□□□ -1.19
PRPF18-201ENST00000320054 SIGMAR1Q99720 223 aa7.62□□□□□ -1.19
PRPF18-201ENST00000320054 LINC00643Q86TS7 51 aa7.6□□□□□ -1.19
PRPF18-201ENST00000320054 CXCL6P80162 114 aa7.59□□□□□ -1.19
PRPF18-201ENST00000320054 IGLV7-46A0A075B6I9 117 aa7.58□□□□□ -1.2
PRPF18-201ENST00000320054 A8MWP4 228 aa7.58□□□□□ -1.2
PRPF18-201ENST00000320054 DSCR10P59022 87 aa7.58□□□□□ -1.2
PRPF18-201ENST00000320054 PRR4Q16378 134 aa7.58□□□□□ -1.2
PRPF18-201ENST00000320054 ATP5EP2Q5VTU8 51 aa7.58□□□□□ -1.2
PRPF18-201ENST00000320054 CDIP1Q9H305 208 aa7.58□□□□□ -1.2
PRPF18-201ENST00000320054 NDUFB1O75438 58 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms