RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 PHF5AQ7RTV0 110 aaKnown RBP7.86□□□□□ -1.15
RNF4-201ENST00000314289 KRTAP11-1Q8IUC1 163 aa7.86□□□□□ -1.15
RNF4-201ENST00000314289 PANO1I0J062 215 aa7.86□□□□□ -1.15
RNF4-201ENST00000314289 IGKV4-1P06312 121 aa7.86□□□□□ -1.15
RNF4-201ENST00000314289 PRYO14603 147 aa7.85□□□□□ -1.15
RNF4-201ENST00000314289 MPLKIPQ8TAP9 179 aa7.85□□□□□ -1.15
RNF4-201ENST00000314289 REG3GQ6UW15 175 aa7.85□□□□□ -1.15
RNF4-201ENST00000314289 SPRR1AP35321 89 aa7.84□□□□□ -1.15
RNF4-201ENST00000314289 Q6ZRN7 208 aaPredicted RBP7.84□□□□□ -1.15
RNF4-201ENST00000314289 PRO0628Q9UI54 55 aa7.84□□□□□ -1.15
RNF4-201ENST00000314289 DNAH2Q9P225 4427 aa7.84□□□□□ -1.15
RNF4-201ENST00000314289 FAM229BQ4G0N7 80 aa7.84□□□□□ -1.15
RNF4-201ENST00000314289 A0A0G2JQZ4 141 aa7.83□□□□□ -1.16
RNF4-201ENST00000314289 HIGD2AQ9BW72 106 aa7.82□□□□□ -1.16
RNF4-201ENST00000314289 DHRS4-AS1Q9P1J3 65 aa7.82□□□□□ -1.16
RNF4-201ENST00000314289 PKIGQ9Y2B9 76 aa7.82□□□□□ -1.16
RNF4-201ENST00000314289 BRK1Q8WUW1 75 aa7.82□□□□□ -1.16
RNF4-201ENST00000314289 ATP5EP56381 51 aaPredicted RBP7.81□□□□□ -1.16
RNF4-201ENST00000314289 C14orf177Q52M58 125 aa7.81□□□□□ -1.16
RNF4-201ENST00000314289 C9orf163Q8N9P6 203 aa7.81□□□□□ -1.16
RNF4-201ENST00000314289 OCR1Q9BZK8 76 aa7.81□□□□□ -1.16
RNF4-201ENST00000314289 FAM30AQ9NZY2 134 aa7.8□□□□□ -1.16
RNF4-201ENST00000314289 C4orf48Q5BLP8 95 aa7.8□□□□□ -1.16
RNF4-201ENST00000314289 HECTD4Q9Y4D8 3996 aa7.79□□□□□ -1.16
RNF4-201ENST00000314289 A0A0U1RQV1 116 aa7.79□□□□□ -1.16
RNF4-201ENST00000314289 SMIM29Q86T20 159 aa7.78□□□□□ -1.16
RNF4-201ENST00000314289 LY6G6CO95867 125 aa7.78□□□□□ -1.16
RNF4-201ENST00000314289 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.78□□□□□ -1.16
RNF4-201ENST00000314289 A0A087WTM6 91 aa7.76□□□□□ -1.17
RNF4-201ENST00000314289 C1orf137Q5JT78 98 aa7.75□□□□□ -1.17
RNF4-201ENST00000314289 FRAS1Q86XX4 4008 aa7.74□□□□□ -1.17
RNF4-201ENST00000314289 IGLV5-48A0A075B6I7 105 aa7.74□□□□□ -1.17
RNF4-201ENST00000314289 A0A1W2PNM2 257 aa7.73□□□□□ -1.17
RNF4-201ENST00000314289 DNAH6Q9C0G6 4158 aa7.72□□□□□ -1.17
RNF4-201ENST00000314289 RTL8CO15255 209 aa7.71□□□□□ -1.17
RNF4-201ENST00000314289 Q6ZR54 194 aa7.71□□□□□ -1.17
RNF4-201ENST00000314289 UBE2AP49459 152 aa7.71□□□□□ -1.18
RNF4-201ENST00000314289 TNP2Q05952 138 aa7.71□□□□□ -1.18
RNF4-201ENST00000314289 HYDINQ4G0P3 5121 aa7.7□□□□□ -1.18
RNF4-201ENST00000314289 LINC00476Q8WZB0 136 aa7.7□□□□□ -1.18
RNF4-201ENST00000314289 PRR4Q16378 134 aa7.69□□□□□ -1.18
RNF4-201ENST00000314289 C1orf134Q5TEV5 83 aa7.68□□□□□ -1.18
RNF4-201ENST00000314289 SPACA4Q8TDM5 124 aa7.68□□□□□ -1.18
RNF4-201ENST00000314289 K7EQZ3 153 aa7.68□□□□□ -1.18
RNF4-201ENST00000314289 Q8NBF4 154 aa7.67□□□□□ -1.18
RNF4-201ENST00000314289 DEFB116Q30KQ4 102 aa7.66□□□□□ -1.18
RNF4-201ENST00000314289 DNAH17Q9UFH2 4485 aa7.66□□□□□ -1.18
RNF4-201ENST00000314289 IGFL1Q6UW32 110 aa7.66□□□□□ -1.18
RNF4-201ENST00000314289 IGLV5-52A0A0A0MRZ9 124 aa7.65□□□□□ -1.18
RNF4-201ENST00000314289 DSCR10P59022 87 aa7.65□□□□□ -1.18
RNF4-201ENST00000314289 DNAH8Q96JB1 4490 aa7.65□□□□□ -1.18
RNF4-201ENST00000314289 C1orf64Q8NEQ6 169 aa7.64□□□□□ -1.19
RNF4-201ENST00000314289 hDV103S1A0JD37 113 aa7.64□□□□□ -1.19
RNF4-201ENST00000314289 C1orf195Q5TG92 126 aa7.63□□□□□ -1.19
RNF4-201ENST00000314289 DNAH11Q96DT5 4516 aa7.62□□□□□ -1.19
RNF4-201ENST00000314289 WFDC13Q8IUB5 93 aa7.61□□□□□ -1.19
RNF4-201ENST00000314289 ANAPC11Q9NYG5 84 aa7.61□□□□□ -1.19
RNF4-201ENST00000314289 A0A087WSZ3 146 aa7.61□□□□□ -1.19
RNF4-201ENST00000314289 PSPHP1O15172 72 aa7.61□□□□□ -1.19
RNF4-201ENST00000314289 KRTAP10-2P60368 255 aa7.61□□□□□ -1.19
RNF4-201ENST00000314289 PSORS1C2Q9UIG4 136 aa7.6□□□□□ -1.19
RNF4-201ENST00000314289 IGLV9-49A0A0B4J1Y8 123 aa7.6□□□□□ -1.19
RNF4-201ENST00000314289 LCE6AA0A183 80 aa7.6□□□□□ -1.19
RNF4-201ENST00000314289 HCG22E2RYF7 251 aa7.6□□□□□ -1.19
RNF4-201ENST00000314289 WWC2-AS2Q96NR7 200 aa7.6□□□□□ -1.19
RNF4-201ENST00000314289 SPRR4Q96PI1 79 aa7.6□□□□□ -1.19
RNF4-201ENST00000314289 DNAH5Q8TE73 4624 aa7.59□□□□□ -1.19
RNF4-201ENST00000314289 A0A1B0GW54 56 aa7.59□□□□□ -1.19
RNF4-201ENST00000314289 H0Y9J4 135 aa7.58□□□□□ -1.2
RNF4-201ENST00000314289 KRTAP13-1Q8IUC0 172 aa7.58□□□□□ -1.2
RNF4-201ENST00000314289 ZCCHC13Q8WW36 166 aaKnown RBP7.58□□□□□ -1.2
RNF4-201ENST00000314289 RPL37AP61513 92 aaKnown RBP7.55□□□□□ -1.2
RNF4-201ENST00000314289 PLAC8Q9NZF1 115 aa7.54□□□□□ -1.2
RNF4-201ENST00000314289 V9GYY9 64 aa7.54□□□□□ -1.2
RNF4-201ENST00000314289 IGLV8-61A0A075B6I0 122 aa7.53□□□□□ -1.2
RNF4-201ENST00000314289 TRAV22A0A0B4J277 110 aa7.53□□□□□ -1.2
RNF4-201ENST00000314289 Q1T7F1 81 aa7.53□□□□□ -1.2
RNF4-201ENST00000314289 LINC00208Q96KT6 92 aa7.53□□□□□ -1.2
RNF4-201ENST00000314289 FAT2Q9NYQ8 4349 aa7.53□□□□□ -1.2
RNF4-201ENST00000314289 SPRR1BP22528 89 aa7.53□□□□□ -1.2
RNF4-201ENST00000314289 MP68P56378 58 aa7.52□□□□□ -1.21
RNF4-201ENST00000314289 SEC61GP60059 68 aa7.52□□□□□ -1.21
RNF4-201ENST00000314289 CIRBP-AS1Q8TBR5 109 aa7.51□□□□□ -1.21
RNF4-201ENST00000314289 PKD1P98161 4303 aa7.51□□□□□ -1.21
RNF4-201ENST00000314289 PKHD1P08F94 4074 aa7.5□□□□□ -1.21
RNF4-201ENST00000314289 A8MUN3 132 aa7.5□□□□□ -1.21
RNF4-201ENST00000314289 ALMS1Q8TCU4 4167 aa7.49□□□□□ -1.21
RNF4-201ENST00000314289 LRP1BQ9NZR2 4599 aa7.49□□□□□ -1.21
RNF4-201ENST00000314289 CYP4F30PQ9H0H9 118 aa7.49□□□□□ -1.21
RNF4-201ENST00000314289 ZNF861PO60384 105 aa7.48□□□□□ -1.21
RNF4-201ENST00000314289 MOBPQ13875 183 aa7.48□□□□□ -1.21
RNF4-201ENST00000314289 NDUFB1O75438 58 aa7.48□□□□□ -1.21
RNF4-201ENST00000314289 KRTAP10-1P60331 282 aa7.48□□□□□ -1.21
RNF4-201ENST00000314289 KRTAP21-3Q3LHN1 58 aa7.48□□□□□ -1.21
RNF4-201ENST00000314289 PRR15Q8IV56 129 aa7.48□□□□□ -1.21
RNF4-201ENST00000314289 H0Y9P7 68 aa7.46□□□□□ -1.21
RNF4-201ENST00000314289 CASC2Q6XLA1 102 aa7.46□□□□□ -1.22
RNF4-201ENST00000314289 A8MU10 97 aa7.45□□□□□ -1.22
RNF4-201ENST00000314289 SACSQ9NZJ4 4579 aa7.45□□□□□ -1.22
RNF4-201ENST00000314289 IGLV7-43P04211 117 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms