RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 DHRS4-AS1Q9P1J3 65 aa11.62□□□□□ -0.55
SPSB4-201ENST00000310546 SPRR4Q96PI1 79 aa11.62□□□□□ -0.55
SPSB4-201ENST00000310546 UBE2AP49459 152 aa11.61□□□□□ -0.55
SPSB4-201ENST00000310546 Q8N9P0 234 aaPredicted RBP11.6□□□□□ -0.55
SPSB4-201ENST00000310546 COL7A1Q02388 2944 aa11.6□□□□□ -0.55
SPSB4-201ENST00000310546 LINC00588Q9Y4M8 146 aa11.59□□□□□ -0.55
SPSB4-201ENST00000310546 SPART-AS1P0CW21 52 aa11.58□□□□□ -0.56
SPSB4-201ENST00000310546 KTN1-AS1Q86SY8 53 aa11.58□□□□□ -0.56
SPSB4-201ENST00000310546 KRTAP26-1Q6PEX3 210 aa11.57□□□□□ -0.56
SPSB4-201ENST00000310546 Q8NAQ8 132 aa11.57□□□□□ -0.56
SPSB4-201ENST00000310546 LIMD2Q9BT23 127 aa11.56□□□□□ -0.56
SPSB4-201ENST00000310546 RBM12B-AS1Q9P1G2 102 aa11.56□□□□□ -0.56
SPSB4-201ENST00000310546 FAM168BA1KXE4 195 aa11.55□□□□□ -0.56
SPSB4-201ENST00000310546 IGKV2D-24A0A075B6R9 120 aa11.55□□□□□ -0.56
SPSB4-201ENST00000310546 A6NED7 52 aa11.54□□□□□ -0.56
SPSB4-201ENST00000310546 RPL37AP61513 92 aaKnown RBP11.53□□□□□ -0.56
SPSB4-201ENST00000310546 LCA10Q71F78 164 aa11.52□□□□□ -0.57
SPSB4-201ENST00000310546 LINC00476Q8WZB0 136 aa11.52□□□□□ -0.57
SPSB4-201ENST00000310546 H0Y9P7 68 aa11.51□□□□□ -0.57
SPSB4-201ENST00000310546 KRTAP4-16G5E9R7 235 aaPredicted RBP11.5□□□□□ -0.57
SPSB4-201ENST00000310546 A0A087WSZ3 146 aa11.49□□□□□ -0.57
SPSB4-201ENST00000310546 IGLV1-50A0A075B6I6 118 aa11.48□□□□□ -0.57
SPSB4-201ENST00000310546 ATP11AUNQ6ZP68 121 aa11.47□□□□□ -0.57
SPSB4-201ENST00000310546 SPANXA2-OT1Q8N9U9 137 aa11.47□□□□□ -0.57
SPSB4-201ENST00000310546 KRTAP21-3Q3LHN1 58 aa11.46□□□□□ -0.58
SPSB4-201ENST00000310546 CSMD3Q7Z407 3707 aa11.45□□□□□ -0.58
SPSB4-201ENST00000310546 IGFL1Q6UW32 110 aa11.45□□□□□ -0.58
SPSB4-201ENST00000310546 DNHD1Q96M86 4753 aa11.44□□□□□ -0.58
SPSB4-201ENST00000310546 LYSTQ99698 3801 aa11.44□□□□□ -0.58
SPSB4-201ENST00000310546 CASC2Q6XLA1 102 aa11.43□□□□□ -0.58
SPSB4-201ENST00000310546 SPRR1AP35321 89 aa11.43□□□□□ -0.58
SPSB4-201ENST00000310546 Q75L30 129 aa11.42□□□□□ -0.58
SPSB4-201ENST00000310546 SRRM2Q9UQ35 2752 aaKnown RBP11.42□□□□□ -0.58
SPSB4-201ENST00000310546 COA5Q86WW8 74 aa11.41□□□□□ -0.58
SPSB4-201ENST00000310546 DNAH3Q8TD57 4116 aa11.41□□□□□ -0.58
SPSB4-201ENST00000310546 KRTAP29-1A8MX34 341 aaPredicted RBP11.4□□□□□ -0.58
SPSB4-201ENST00000310546 TGP01266 2768 aa11.4□□□□□ -0.58
SPSB4-201ENST00000310546 A6NN06 94 aa11.39□□□□□ -0.59
SPSB4-201ENST00000310546 K7EIL1 84 aa11.39□□□□□ -0.59
SPSB4-201ENST00000310546 NDUFS5O43920 106 aa11.39□□□□□ -0.59
SPSB4-201ENST00000310546 KRTAP7-1Q8IUC3 87 aa11.38□□□□□ -0.59
SPSB4-201ENST00000310546 H3BPC8 53 aa11.36□□□□□ -0.59
SPSB4-201ENST00000310546 C9orf163Q8N9P6 203 aa11.36□□□□□ -0.59
SPSB4-201ENST00000310546 HUWE1Q7Z6Z7 4374 aaKnown RBP11.36□□□□□ -0.59
SPSB4-201ENST00000310546 LOC101927531A0A1B0GV80 90 aa11.36□□□□□ -0.59
SPSB4-201ENST00000310546 SPAG11AQ6PDA7 123 aa11.36□□□□□ -0.59
SPSB4-201ENST00000310546 PHF5AQ7RTV0 110 aaKnown RBP11.36□□□□□ -0.59
SPSB4-201ENST00000310546 C11orf45Q8TAV5 145 aa11.35□□□□□ -0.59
SPSB4-201ENST00000310546 CDC42SE1Q9NRR8 79 aa11.34□□□□□ -0.59
SPSB4-201ENST00000310546 PLA2G2DQ9UNK4 145 aa11.34□□□□□ -0.59
SPSB4-201ENST00000310546 CNBPP62633 177 aaKnown RBP11.34□□□□□ -0.59
SPSB4-201ENST00000310546 PCOTHQ58A44 107 aa11.34□□□□□ -0.59
SPSB4-201ENST00000310546 REG3GQ6UW15 175 aa11.33□□□□□ -0.6
SPSB4-201ENST00000310546 DEFB131BA0A096LNP1 70 aa11.33□□□□□ -0.6
SPSB4-201ENST00000310546 MEGF8Q7Z7M0 2845 aa11.33□□□□□ -0.6
SPSB4-201ENST00000310546 PRLHP81277 87 aa11.32□□□□□ -0.6
SPSB4-201ENST00000310546 TLX1NBP0CAT3 122 aa11.32□□□□□ -0.6
SPSB4-201ENST00000310546 IGLV5-37A0A075B6J1 123 aa11.29□□□□□ -0.6
SPSB4-201ENST00000310546 MOBPQ13875 183 aa11.29□□□□□ -0.6
SPSB4-201ENST00000310546 LINC01556Q5JQF7 62 aa11.29□□□□□ -0.6
SPSB4-201ENST00000310546 C7orf65Q6ZTY9 151 aa11.29□□□□□ -0.6
SPSB4-201ENST00000310546 IGLV7-46A0A075B6I9 117 aa11.28□□□□□ -0.6
SPSB4-201ENST00000310546 CASC10Q5T4H9 136 aa11.28□□□□□ -0.6
SPSB4-201ENST00000310546 H0Y9J4 135 aa11.28□□□□□ -0.6
SPSB4-201ENST00000310546 A8MWP4 228 aa11.26□□□□□ -0.61
SPSB4-201ENST00000310546 H3BNG1 76 aa11.24□□□□□ -0.61
SPSB4-201ENST00000310546 PRKDCP78527 4128 aaKnown RBP11.24□□□□□ -0.61
SPSB4-201ENST00000310546 SPINK7P58062 85 aa11.23□□□□□ -0.61
SPSB4-201ENST00000310546 A0A096LNI7 61 aa11.22□□□□□ -0.61
SPSB4-201ENST00000310546 LINC01558Q9Y6Z2 57 aa11.2□□□□□ -0.62
SPSB4-201ENST00000310546 DNAH9Q9NYC9 4486 aa11.2□□□□□ -0.62
SPSB4-201ENST00000310546 IGLV8-61A0A075B6I0 122 aa11.19□□□□□ -0.62
SPSB4-201ENST00000310546 LINC00472Q9H8W2 130 aa11.19□□□□□ -0.62
SPSB4-201ENST00000310546 IGKV2-24A0A0C4DH68 120 aa11.18□□□□□ -0.62
SPSB4-201ENST00000310546 DNAH7Q8WXX0 4024 aa11.17□□□□□ -0.62
SPSB4-201ENST00000310546 MMP24-AS1A0A0U1RRL7 71 aa11.16□□□□□ -0.62
SPSB4-201ENST00000310546 PLAC8Q9NZF1 115 aa11.13□□□□□ -0.63
SPSB4-201ENST00000310546 DNAH10OSP0CZ25 163 aa11.12□□□□□ -0.63
SPSB4-201ENST00000310546 DNAH10Q8IVF4 4471 aa11.12□□□□□ -0.63
SPSB4-201ENST00000310546 FBN3Q75N90 2809 aa11.11□□□□□ -0.63
SPSB4-201ENST00000310546 HRES1P13985 223 aa11.1□□□□□ -0.63
SPSB4-201ENST00000310546 PRAC1Q96KF2 57 aa11.09□□□□□ -0.63
SPSB4-201ENST00000310546 C8orf87E5RJ46 101 aa11.08□□□□□ -0.63
SPSB4-201ENST00000310546 LINC00313P59037 77 aa11.08□□□□□ -0.64
SPSB4-201ENST00000310546 PLECQ15149 4684 aaKnown RBP11.05□□□□□ -0.64
SPSB4-201ENST00000310546 C4orf48Q5BLP8 95 aa11.05□□□□□ -0.64
SPSB4-201ENST00000310546 TP53AIP1Q9HCN2 124 aa11.03□□□□□ -0.64
SPSB4-201ENST00000310546 PRR26Q8N8Z3 221 aa11.03□□□□□ -0.64
SPSB4-201ENST00000310546 KRTAP11-1Q8IUC1 163 aa11.01□□□□□ -0.65
SPSB4-201ENST00000310546 ADM2Q7Z4H4 148 aa11□□□□□ -0.65
SPSB4-201ENST00000310546 UBE2DNLQ8IWF7 75 aa10.99□□□□□ -0.65
SPSB4-201ENST00000310546 Q6ZR54 194 aa10.98□□□□□ -0.65
SPSB4-201ENST00000310546 STARD9Q9P2P6 4700 aa10.98□□□□□ -0.65
SPSB4-201ENST00000310546 IGHV6-1A0A0B4J1U7 121 aa10.98□□□□□ -0.65
SPSB4-201ENST00000310546 C8orf17Q9NRJ1 99 aa10.96□□□□□ -0.65
SPSB4-201ENST00000310546 CHTF8P0CG12 524 aa10.95□□□□□ -0.66
SPSB4-201ENST00000310546 SPRR1BP22528 89 aa10.95□□□□□ -0.66
SPSB4-201ENST00000310546 KRTAP1-5Q9BYS1 174 aa10.95□□□□□ -0.66
SPSB4-201ENST00000310546 DNAH1Q9P2D7 4330 aa10.94□□□□□ -0.66
SPSB4-201ENST00000310546 IGLV9-49A0A0B4J1Y8 123 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms