RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 Q8NBF4 154 aa9.36□□□□□ -0.91
PTPN9-201ENST00000306726 OCR1Q9BZK8 76 aa9.36□□□□□ -0.91
PTPN9-201ENST00000306726 EPM2AB3EWF7 344 aa9.36□□□□□ -0.91
PTPN9-201ENST00000306726 DNAH3Q8TD57 4116 aa9.35□□□□□ -0.91
PTPN9-201ENST00000306726 HCG22E2RYF7 251 aa9.35□□□□□ -0.91
PTPN9-201ENST00000306726 A8MUN3 132 aa9.34□□□□□ -0.91
PTPN9-201ENST00000306726 CMYA5Q8N3K9 4069 aa9.34□□□□□ -0.91
PTPN9-201ENST00000306726 LINC01556Q5JQF7 62 aa9.34□□□□□ -0.91
PTPN9-201ENST00000306726 CHKB-CPT1BH3BT56 60 aa9.33□□□□□ -0.92
PTPN9-201ENST00000306726 KCNQ1DNQ9H478 68 aa9.33□□□□□ -0.92
PTPN9-201ENST00000306726 IGLV1-50A0A075B6I6 118 aa9.32□□□□□ -0.92
PTPN9-201ENST00000306726 RETNLBQ9BQ08 111 aa9.32□□□□□ -0.92
PTPN9-201ENST00000306726 ANAPC11Q9NYG5 84 aa9.32□□□□□ -0.92
PTPN9-201ENST00000306726 DSCR10P59022 87 aa9.31□□□□□ -0.92
PTPN9-201ENST00000306726 IGFL1Q6UW32 110 aa9.31□□□□□ -0.92
PTPN9-201ENST00000306726 NUPR2A6NF83 97 aa9.3□□□□□ -0.92
PTPN9-201ENST00000306726 CASC2Q6XLA1 102 aa9.3□□□□□ -0.92
PTPN9-201ENST00000306726 H0Y9P7 68 aa9.29□□□□□ -0.92
PTPN9-201ENST00000306726 PRR15LQ9BU68 103 aa9.29□□□□□ -0.92
PTPN9-201ENST00000306726 KRTAP26-1Q6PEX3 210 aa9.29□□□□□ -0.92
PTPN9-201ENST00000306726 V9GYY9 64 aa9.29□□□□□ -0.92
PTPN9-201ENST00000306726 DNAH10OSP0CZ25 163 aa9.28□□□□□ -0.92
PTPN9-201ENST00000306726 A8MU10 97 aa9.28□□□□□ -0.92
PTPN9-201ENST00000306726 IGHV6-1A0A0B4J1U7 121 aa9.26□□□□□ -0.93
PTPN9-201ENST00000306726 CDK2AP2O75956 126 aa9.25□□□□□ -0.93
PTPN9-201ENST00000306726 PMAIP1Q13794 54 aa9.25□□□□□ -0.93
PTPN9-201ENST00000306726 TGP01266 2768 aa9.25□□□□□ -0.93
PTPN9-201ENST00000306726 ATP5EP56381 51 aaPredicted RBP9.24□□□□□ -0.93
PTPN9-201ENST00000306726 A6NED7 52 aa9.24□□□□□ -0.93
PTPN9-201ENST00000306726 WWC2-AS2Q96NR7 200 aa9.22□□□□□ -0.93
PTPN9-201ENST00000306726 IGLV5-48A0A075B6I7 105 aa9.21□□□□□ -0.94
PTPN9-201ENST00000306726 TRAV22A0A0B4J277 110 aa9.21□□□□□ -0.94
PTPN9-201ENST00000306726 BCE1O60756 84 aa9.21□□□□□ -0.94
PTPN9-201ENST00000306726 NDUFB1O75438 58 aa9.21□□□□□ -0.94
PTPN9-201ENST00000306726 SPAG11AQ6PDA7 123 aa9.2□□□□□ -0.94
PTPN9-201ENST00000306726 KRTAP7-1Q8IUC3 87 aa9.2□□□□□ -0.94
PTPN9-201ENST00000306726 hDV103S1A0JD37 113 aa9.17□□□□□ -0.94
PTPN9-201ENST00000306726 KRTAP1-5Q9BYS1 174 aa9.17□□□□□ -0.94
PTPN9-201ENST00000306726 DNHD1Q96M86 4753 aa9.16□□□□□ -0.94
PTPN9-201ENST00000306726 KRTAP11-1Q8IUC1 163 aa9.15□□□□□ -0.95
PTPN9-201ENST00000306726 APLNQ9ULZ1 77 aa9.12□□□□□ -0.95
PTPN9-201ENST00000306726 SEC61GP60059 68 aa9.11□□□□□ -0.95
PTPN9-201ENST00000306726 MOBPQ13875 183 aa9.1□□□□□ -0.95
PTPN9-201ENST00000306726 CIRBP-AS1Q8TBR5 109 aa9.1□□□□□ -0.95
PTPN9-201ENST00000306726 PRR15Q8IV56 129 aa9.09□□□□□ -0.95
PTPN9-201ENST00000306726 DMBT1Q9UGM3 2413 aaPredicted RBP9.09□□□□□ -0.95
PTPN9-201ENST00000306726 PANO1I0J062 215 aa9.07□□□□□ -0.96
PTPN9-201ENST00000306726 C16orf90A8MZG2 172 aa9.06□□□□□ -0.96
PTPN9-201ENST00000306726 DNAH9Q9NYC9 4486 aa9.06□□□□□ -0.96
PTPN9-201ENST00000306726 KRTAP4-16G5E9R7 235 aaPredicted RBP9.06□□□□□ -0.96
PTPN9-201ENST00000306726 HUWE1Q7Z6Z7 4374 aaKnown RBP9.05□□□□□ -0.96
PTPN9-201ENST00000306726 SPRR4Q96PI1 79 aa9.05□□□□□ -0.96
PTPN9-201ENST00000306726 TNP2Q05952 138 aa9.04□□□□□ -0.96
PTPN9-201ENST00000306726 CNBPP62633 177 aaKnown RBP9.03□□□□□ -0.96
PTPN9-201ENST00000306726 FBN3Q75N90 2809 aa9.03□□□□□ -0.96
PTPN9-201ENST00000306726 COA5Q86WW8 74 aa9.03□□□□□ -0.96
PTPN9-201ENST00000306726 MEGF8Q7Z7M0 2845 aa9.02□□□□□ -0.97
PTPN9-201ENST00000306726 SPRR1AP35321 89 aa9.02□□□□□ -0.97
PTPN9-201ENST00000306726 TLX1NBP0CAT3 122 aa9□□□□□ -0.97
PTPN9-201ENST00000306726 A8MWP4 228 aa9□□□□□ -0.97
PTPN9-201ENST00000306726 PRR26Q8N8Z3 221 aa8.98□□□□□ -0.97
PTPN9-201ENST00000306726 IGLV8-61A0A075B6I0 122 aa8.98□□□□□ -0.97
PTPN9-201ENST00000306726 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.97□□□□□ -0.97
PTPN9-201ENST00000306726 SPINK1P00995 79 aa8.96□□□□□ -0.98
PTPN9-201ENST00000306726 FLG2Q5D862 2391 aaPredicted RBP8.94□□□□□ -0.98
PTPN9-201ENST00000306726 A0A087X002 238 aa8.93□□□□□ -0.98
PTPN9-201ENST00000306726 NOTCH2NLQ7Z3S9 236 aa8.93□□□□□ -0.98
PTPN9-201ENST00000306726 NBDYA0A0U1RRE5 68 aa8.93□□□□□ -0.98
PTPN9-201ENST00000306726 F8WDY8 70 aa8.93□□□□□ -0.98
PTPN9-201ENST00000306726 Q5VV11 94 aa8.93□□□□□ -0.98
PTPN9-201ENST00000306726 PLA2G2DQ9UNK4 145 aa8.93□□□□□ -0.98
PTPN9-201ENST00000306726 C14orf177Q52M58 125 aa8.92□□□□□ -0.98
PTPN9-201ENST00000306726 Q8N9P0 234 aaPredicted RBP8.91□□□□□ -0.98
PTPN9-201ENST00000306726 ZCCHC13Q8WW36 166 aaKnown RBP8.91□□□□□ -0.98
PTPN9-201ENST00000306726 PRKDCP78527 4128 aaKnown RBP8.9□□□□□ -0.98
PTPN9-201ENST00000306726 LY6G6CO95867 125 aa8.9□□□□□ -0.98
PTPN9-201ENST00000306726 Q1T7F1 81 aa8.9□□□□□ -0.99
PTPN9-201ENST00000306726 IGLV5-37A0A075B6J1 123 aa8.89□□□□□ -0.99
PTPN9-201ENST00000306726 CD164Q04900 197 aa8.89□□□□□ -0.99
PTPN9-201ENST00000306726 C8orf17Q9NRJ1 99 aa8.88□□□□□ -0.99
PTPN9-201ENST00000306726 DNAH10Q8IVF4 4471 aa8.87□□□□□ -0.99
PTPN9-201ENST00000306726 IGKV2D-30A0A075B6S6 120 aa8.87□□□□□ -0.99
PTPN9-201ENST00000306726 MMP24-AS1A0A0U1RRL7 71 aa8.87□□□□□ -0.99
PTPN9-201ENST00000306726 IGKV2-30P06310 120 aa8.87□□□□□ -0.99
PTPN9-201ENST00000306726 C9orf163Q8N9P6 203 aa8.86□□□□□ -0.99
PTPN9-201ENST00000306726 LIMD2Q9BT23 127 aa8.86□□□□□ -0.99
PTPN9-201ENST00000306726 LINC00472Q9H8W2 130 aa8.86□□□□□ -0.99
PTPN9-201ENST00000306726 DYNC2H1Q8NCM8 4307 aaKnown RBP8.86□□□□□ -0.99
PTPN9-201ENST00000306726 A0A1B0GW54 56 aa8.86□□□□□ -0.99
PTPN9-201ENST00000306726 PSORS1C2Q9UIG4 136 aa8.86□□□□□ -0.99
PTPN9-201ENST00000306726 Q6ZR54 194 aa8.84□□□□□ -0.99
PTPN9-201ENST00000306726 LCE6AA0A183 80 aa8.84□□□□□ -0.99
PTPN9-201ENST00000306726 LYSTQ99698 3801 aa8.83□□□□□ -1
PTPN9-201ENST00000306726 KRTAP29-1A8MX34 341 aaPredicted RBP8.82□□□□□ -1
PTPN9-201ENST00000306726 SPINK7P58062 85 aa8.82□□□□□ -1
PTPN9-201ENST00000306726 C1orf134Q5TEV5 83 aa8.82□□□□□ -1
PTPN9-201ENST00000306726 IGLV5-52A0A0A0MRZ9 124 aa8.82□□□□□ -1
PTPN9-201ENST00000306726 CYP4F30PQ9H0H9 118 aa8.81□□□□□ -1
PTPN9-201ENST00000306726 RTL8CO15255 209 aa8.81□□□□□ -1
PTPN9-201ENST00000306726 SPACA4Q8TDM5 124 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms