RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 APLNQ9ULZ1 77 aa7.09□□□□□ -1.27
LSM3-201ENST00000306024 Q5VV11 94 aa7.09□□□□□ -1.27
LSM3-201ENST00000306024 CYP4F30PQ9H0H9 118 aa7.09□□□□□ -1.27
LSM3-201ENST00000306024 C16orf90A8MZG2 172 aa7.08□□□□□ -1.28
LSM3-201ENST00000306024 Q8N377 158 aa7.08□□□□□ -1.28
LSM3-201ENST00000306024 H0Y9J4 135 aa7.07□□□□□ -1.28
LSM3-201ENST00000306024 A0A1W2PNM2 257 aa7.07□□□□□ -1.28
LSM3-201ENST00000306024 PRR34Q9NV39 138 aa7.07□□□□□ -1.28
LSM3-201ENST00000306024 A0A087WSZ3 146 aa7.06□□□□□ -1.28
LSM3-201ENST00000306024 PCOTHQ58A44 107 aa7.06□□□□□ -1.28
LSM3-201ENST00000306024 CASC2Q6XLA1 102 aa7.06□□□□□ -1.28
LSM3-201ENST00000306024 GVQW2A0A096LPI5 108 aaPredicted RBP7.06□□□□□ -1.28
LSM3-201ENST00000306024 A0A1B0GW54 56 aa7.05□□□□□ -1.28
LSM3-201ENST00000306024 SPAG11AQ6PDA7 123 aa7.05□□□□□ -1.28
LSM3-201ENST00000306024 NBDYA0A0U1RRE5 68 aa7.05□□□□□ -1.28
LSM3-201ENST00000306024 C14orf177Q52M58 125 aa7.05□□□□□ -1.28
LSM3-201ENST00000306024 C7orf33Q8WU49 177 aa7.04□□□□□ -1.28
LSM3-201ENST00000306024 TGP01266 2768 aa7.04□□□□□ -1.28
LSM3-201ENST00000306024 Q8N9P0 234 aaPredicted RBP7.04□□□□□ -1.28
LSM3-201ENST00000306024 C7orf65Q6ZTY9 151 aa7.03□□□□□ -1.28
LSM3-201ENST00000306024 DSCR10P59022 87 aa7.03□□□□□ -1.28
LSM3-201ENST00000306024 IGKV2-24A0A0C4DH68 120 aa7.02□□□□□ -1.29
LSM3-201ENST00000306024 RPL37AP61513 92 aaKnown RBP7.02□□□□□ -1.29
LSM3-201ENST00000306024 COA5Q86WW8 74 aa7.02□□□□□ -1.29
LSM3-201ENST00000306024 C4orf48Q5BLP8 95 aa7.02□□□□□ -1.29
LSM3-201ENST00000306024 A0A096LNI7 61 aa7.01□□□□□ -1.29
LSM3-201ENST00000306024 LOC101927531A0A1B0GV80 90 aa7.01□□□□□ -1.29
LSM3-201ENST00000306024 IGLV5-48A0A075B6I7 105 aa7.01□□□□□ -1.29
LSM3-201ENST00000306024 A0A0G2JQZ4 141 aa7□□□□□ -1.29
LSM3-201ENST00000306024 A0A1W2PNN7 141 aa7□□□□□ -1.29
LSM3-201ENST00000306024 C1orf134Q5TEV5 83 aa7□□□□□ -1.29
LSM3-201ENST00000306024 ZCCHC13Q8WW36 166 aaKnown RBP7□□□□□ -1.29
LSM3-201ENST00000306024 Q6ZRX8 168 aa6.99□□□□□ -1.29
LSM3-201ENST00000306024 LINC00476Q8WZB0 136 aa6.99□□□□□ -1.29
LSM3-201ENST00000306024 LCA10Q71F78 164 aa6.98□□□□□ -1.29
LSM3-201ENST00000306024 CDC42SE1Q9NRR8 79 aa6.98□□□□□ -1.29
LSM3-201ENST00000306024 CASC10Q5T4H9 136 aa6.97□□□□□ -1.29
LSM3-201ENST00000306024 H3BPC8 53 aa6.97□□□□□ -1.29
LSM3-201ENST00000306024 CDK2AP2O75956 126 aa6.97□□□□□ -1.29
LSM3-201ENST00000306024 KCNQ1DNQ9H478 68 aa6.97□□□□□ -1.29
LSM3-201ENST00000306024 SERTAD4-AS1Q5TG53 156 aa6.96□□□□□ -1.29
LSM3-201ENST00000306024 SPANXA2-OT1Q8N9U9 137 aa6.96□□□□□ -1.3
LSM3-201ENST00000306024 Q75L30 129 aa6.95□□□□□ -1.3
LSM3-201ENST00000306024 C15orf56Q8N910 161 aa6.95□□□□□ -1.3
LSM3-201ENST00000306024 TENM2Q9NT68 2774 aa6.94□□□□□ -1.3
LSM3-201ENST00000306024 LCE6AA0A183 80 aa6.94□□□□□ -1.3
LSM3-201ENST00000306024 KRTAP1-5Q9BYS1 174 aa6.94□□□□□ -1.3
LSM3-201ENST00000306024 Q9BRP9 147 aa6.93□□□□□ -1.3
LSM3-201ENST00000306024 FBN3Q75N90 2809 aa6.93□□□□□ -1.3
LSM3-201ENST00000306024 SPRR4Q96PI1 79 aa6.91□□□□□ -1.3
LSM3-201ENST00000306024 FAM168BA1KXE4 195 aa6.91□□□□□ -1.3
LSM3-201ENST00000306024 REG3GQ6UW15 175 aa6.91□□□□□ -1.3
LSM3-201ENST00000306024 PRLHP81277 87 aa6.9□□□□□ -1.3
LSM3-201ENST00000306024 PHF5AQ7RTV0 110 aaKnown RBP6.9□□□□□ -1.3
LSM3-201ENST00000306024 IGFL1Q6UW32 110 aa6.9□□□□□ -1.3
LSM3-201ENST00000306024 IGLV5-52A0A0A0MRZ9 124 aa6.89□□□□□ -1.31
LSM3-201ENST00000306024 MOBPQ13875 183 aa6.89□□□□□ -1.31
LSM3-201ENST00000306024 H3BS24 57 aa6.88□□□□□ -1.31
LSM3-201ENST00000306024 PRAC1Q96KF2 57 aa6.88□□□□□ -1.31
LSM3-201ENST00000306024 A6NN06 94 aa6.88□□□□□ -1.31
LSM3-201ENST00000306024 MEGF8Q7Z7M0 2845 aa6.88□□□□□ -1.31
LSM3-201ENST00000306024 C8orf87E5RJ46 101 aa6.88□□□□□ -1.31
LSM3-201ENST00000306024 KRTAP26-1Q6PEX3 210 aa6.88□□□□□ -1.31
LSM3-201ENST00000306024 IGLV1-50A0A075B6I6 118 aa6.86□□□□□ -1.31
LSM3-201ENST00000306024 DNHD1Q96M86 4753 aa6.86□□□□□ -1.31
LSM3-201ENST00000306024 A0A087WTM6 91 aa6.85□□□□□ -1.31
LSM3-201ENST00000306024 A8MWP4 228 aa6.85□□□□□ -1.31
LSM3-201ENST00000306024 SPINK7P58062 85 aa6.85□□□□□ -1.31
LSM3-201ENST00000306024 RTL8CO15255 209 aa6.83□□□□□ -1.32
LSM3-201ENST00000306024 CHTF8P0CG12 524 aa6.83□□□□□ -1.32
LSM3-201ENST00000306024 LINC00313P59037 77 aa6.83□□□□□ -1.32
LSM3-201ENST00000306024 IGLV7-46A0A075B6I9 117 aa6.82□□□□□ -1.32
LSM3-201ENST00000306024 TNP2Q05952 138 aa6.82□□□□□ -1.32
LSM3-201ENST00000306024 LINC01558Q9Y6Z2 57 aa6.82□□□□□ -1.32
LSM3-201ENST00000306024 ANK2Q01484 3957 aa6.82□□□□□ -1.32
LSM3-201ENST00000306024 IGHV6-1A0A0B4J1U7 121 aa6.81□□□□□ -1.32
LSM3-201ENST00000306024 C9orf163Q8N9P6 203 aa6.8□□□□□ -1.32
LSM3-201ENST00000306024 LINC01554Q52M75 96 aa6.79□□□□□ -1.32
LSM3-201ENST00000306024 TP53AIP1Q9HCN2 124 aa6.79□□□□□ -1.32
LSM3-201ENST00000306024 COL7A1Q02388 2944 aa6.79□□□□□ -1.32
LSM3-201ENST00000306024 CNBPP62633 177 aaKnown RBP6.79□□□□□ -1.32
LSM3-201ENST00000306024 Q6ZR54 194 aa6.79□□□□□ -1.32
LSM3-201ENST00000306024 HUWE1Q7Z6Z7 4374 aaKnown RBP6.78□□□□□ -1.32
LSM3-201ENST00000306024 PRR26Q8N8Z3 221 aa6.78□□□□□ -1.32
LSM3-201ENST00000306024 IGLV9-49A0A0B4J1Y8 123 aa6.77□□□□□ -1.33
LSM3-201ENST00000306024 TLX1NBP0CAT3 122 aa6.77□□□□□ -1.33
LSM3-201ENST00000306024 A0A1B0GU69 56 aa6.76□□□□□ -1.33
LSM3-201ENST00000306024 KRTAP29-1A8MX34 341 aaPredicted RBP6.75□□□□□ -1.33
LSM3-201ENST00000306024 RETNLBQ9BQ08 111 aa6.75□□□□□ -1.33
LSM3-201ENST00000306024 SPINK6Q6UWN8 80 aa6.74□□□□□ -1.33
LSM3-201ENST00000306024 DNAH9Q9NYC9 4486 aa6.73□□□□□ -1.33
LSM3-201ENST00000306024 SPRR1AP35321 89 aa6.73□□□□□ -1.33
LSM3-201ENST00000306024 Q6ZRN7 208 aaPredicted RBP6.73□□□□□ -1.33
LSM3-201ENST00000306024 PLA2G2DQ9UNK4 145 aa6.73□□□□□ -1.33
LSM3-201ENST00000306024 HRES1P13985 223 aa6.72□□□□□ -1.33
LSM3-201ENST00000306024 ACYP2P14621 99 aa6.71□□□□□ -1.33
LSM3-201ENST00000306024 CMYA5Q8N3K9 4069 aa6.71□□□□□ -1.33
LSM3-201ENST00000306024 KRTAP4-16G5E9R7 235 aaPredicted RBP6.71□□□□□ -1.34
LSM3-201ENST00000306024 ADM2Q7Z4H4 148 aa6.71□□□□□ -1.34
LSM3-201ENST00000306024 MMP24-AS1A0A0U1RRL7 71 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms