RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 SPRR1AP35321 89 aa9.87□□□□□ -0.83
CHAF1A-201ENST00000301280 SERP1Q9Y6X1 66 aa9.86□□□□□ -0.83
CHAF1A-201ENST00000301280 LY6G6CO95867 125 aa9.85□□□□□ -0.83
CHAF1A-201ENST00000301280 PRYO14603 147 aa9.85□□□□□ -0.83
CHAF1A-201ENST00000301280 LINC00336Q6ZUF6 198 aa9.85□□□□□ -0.83
CHAF1A-201ENST00000301280 K7EQZ3 153 aa9.85□□□□□ -0.83
CHAF1A-201ENST00000301280 MEGF8Q7Z7M0 2845 aa9.84□□□□□ -0.83
CHAF1A-201ENST00000301280 IGKV4-1P06312 121 aa9.84□□□□□ -0.83
CHAF1A-201ENST00000301280 APLNQ9ULZ1 77 aa9.84□□□□□ -0.83
CHAF1A-201ENST00000301280 DNAH9Q9NYC9 4486 aa9.83□□□□□ -0.84
CHAF1A-201ENST00000301280 H0Y9J4 135 aa9.82□□□□□ -0.84
CHAF1A-201ENST00000301280 FAM229BQ4G0N7 80 aa9.82□□□□□ -0.84
CHAF1A-201ENST00000301280 IGLV5-48A0A075B6I7 105 aa9.81□□□□□ -0.84
CHAF1A-201ENST00000301280 C16orf90A8MZG2 172 aa9.81□□□□□ -0.84
CHAF1A-201ENST00000301280 NBDYA0A0U1RRE5 68 aa9.81□□□□□ -0.84
CHAF1A-201ENST00000301280 IGFL1Q6UW32 110 aa9.8□□□□□ -0.84
CHAF1A-201ENST00000301280 MPLKIPQ8TAP9 179 aa9.8□□□□□ -0.84
CHAF1A-201ENST00000301280 TMEM254Q8TBM7 123 aa9.79□□□□□ -0.84
CHAF1A-201ENST00000301280 TNP2Q05952 138 aa9.79□□□□□ -0.84
CHAF1A-201ENST00000301280 Q8NBF4 154 aa9.79□□□□□ -0.84
CHAF1A-201ENST00000301280 OCR1Q9BZK8 76 aa9.79□□□□□ -0.84
CHAF1A-201ENST00000301280 A0A1B0GW54 56 aa9.78□□□□□ -0.84
CHAF1A-201ENST00000301280 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.78□□□□□ -0.84
CHAF1A-201ENST00000301280 SPINK6Q6UWN8 80 aa9.77□□□□□ -0.84
CHAF1A-201ENST00000301280 PKIGQ9Y2B9 76 aa9.75□□□□□ -0.85
CHAF1A-201ENST00000301280 SEC61GP60059 68 aa9.74□□□□□ -0.85
CHAF1A-201ENST00000301280 B9D2Q9BPU9 175 aa9.74□□□□□ -0.85
CHAF1A-201ENST00000301280 DNAH7Q8WXX0 4024 aa9.74□□□□□ -0.85
CHAF1A-201ENST00000301280 A0A0U1RQV1 116 aa9.73□□□□□ -0.85
CHAF1A-201ENST00000301280 NDUFS5O43920 106 aa9.72□□□□□ -0.85
CHAF1A-201ENST00000301280 SMIM26A0A096LP01 95 aa9.72□□□□□ -0.85
CHAF1A-201ENST00000301280 C14orf177Q52M58 125 aa9.71□□□□□ -0.86
CHAF1A-201ENST00000301280 PLECQ15149 4684 aaKnown RBP9.69□□□□□ -0.86
CHAF1A-201ENST00000301280 DSCR10P59022 87 aa9.69□□□□□ -0.86
CHAF1A-201ENST00000301280 C9orf163Q8N9P6 203 aa9.69□□□□□ -0.86
CHAF1A-201ENST00000301280 NDUFC1O43677 76 aa9.69□□□□□ -0.86
CHAF1A-201ENST00000301280 NUPR2A6NF83 97 aa9.68□□□□□ -0.86
CHAF1A-201ENST00000301280 CNBPP62633 177 aaKnown RBP9.67□□□□□ -0.86
CHAF1A-201ENST00000301280 SPRR4Q96PI1 79 aa9.67□□□□□ -0.86
CHAF1A-201ENST00000301280 DNHD1Q96M86 4753 aa9.67□□□□□ -0.86
CHAF1A-201ENST00000301280 LINC00208Q96KT6 92 aa9.66□□□□□ -0.86
CHAF1A-201ENST00000301280 PRO0628Q9UI54 55 aa9.66□□□□□ -0.86
CHAF1A-201ENST00000301280 RTL8CO15255 209 aa9.65□□□□□ -0.86
CHAF1A-201ENST00000301280 MOBPQ13875 183 aa9.65□□□□□ -0.86
CHAF1A-201ENST00000301280 IGLV5-52A0A0A0MRZ9 124 aa9.64□□□□□ -0.87
CHAF1A-201ENST00000301280 HCG22E2RYF7 251 aa9.63□□□□□ -0.87
CHAF1A-201ENST00000301280 PRKDCP78527 4128 aaKnown RBP9.63□□□□□ -0.87
CHAF1A-201ENST00000301280 A0A087WTM6 91 aa9.62□□□□□ -0.87
CHAF1A-201ENST00000301280 CIRBP-AS1Q8TBR5 109 aa9.62□□□□□ -0.87
CHAF1A-201ENST00000301280 IGHV6-1A0A0B4J1U7 121 aa9.61□□□□□ -0.87
CHAF1A-201ENST00000301280 IGLV8-61A0A075B6I0 122 aa9.61□□□□□ -0.87
CHAF1A-201ENST00000301280 RETNLBQ9BQ08 111 aa9.61□□□□□ -0.87
CHAF1A-201ENST00000301280 V9GYY9 64 aa9.61□□□□□ -0.87
CHAF1A-201ENST00000301280 VPS13DQ5THJ4 4388 aa9.6□□□□□ -0.87
CHAF1A-201ENST00000301280 PSORS1C2Q9UIG4 136 aa9.59□□□□□ -0.87
CHAF1A-201ENST00000301280 LCE6AA0A183 80 aa9.59□□□□□ -0.87
CHAF1A-201ENST00000301280 PCOTHQ58A44 107 aa9.59□□□□□ -0.87
CHAF1A-201ENST00000301280 ATP5EP56381 51 aaPredicted RBP9.58□□□□□ -0.88
CHAF1A-201ENST00000301280 CASC2Q6XLA1 102 aa9.58□□□□□ -0.88
CHAF1A-201ENST00000301280 C1orf134Q5TEV5 83 aa9.57□□□□□ -0.88
CHAF1A-201ENST00000301280 BRK1Q8WUW1 75 aa9.56□□□□□ -0.88
CHAF1A-201ENST00000301280 STARD9Q9P2P6 4700 aa9.56□□□□□ -0.88
CHAF1A-201ENST00000301280 CDK2AP2O75956 126 aa9.56□□□□□ -0.88
CHAF1A-201ENST00000301280 HECTD4Q9Y4D8 3996 aa9.55□□□□□ -0.88
CHAF1A-201ENST00000301280 KMT2AQ03164 3969 aa9.54□□□□□ -0.88
CHAF1A-201ENST00000301280 ZCCHC13Q8WW36 166 aaKnown RBP9.54□□□□□ -0.88
CHAF1A-201ENST00000301280 MP68P56378 58 aa9.53□□□□□ -0.88
CHAF1A-201ENST00000301280 SPRR1BP22528 89 aa9.53□□□□□ -0.88
CHAF1A-201ENST00000301280 NDUFB1O75438 58 aa9.52□□□□□ -0.89
CHAF1A-201ENST00000301280 hDV103S1A0JD37 113 aa9.52□□□□□ -0.89
CHAF1A-201ENST00000301280 Q6ZRN7 208 aaPredicted RBP9.51□□□□□ -0.89
CHAF1A-201ENST00000301280 C1orf64Q8NEQ6 169 aa9.51□□□□□ -0.89
CHAF1A-201ENST00000301280 PSPHP1O15172 72 aa9.49□□□□□ -0.89
CHAF1A-201ENST00000301280 H0Y9P7 68 aa9.49□□□□□ -0.89
CHAF1A-201ENST00000301280 DNAH6Q9C0G6 4158 aa9.48□□□□□ -0.89
CHAF1A-201ENST00000301280 C1orf195Q5TG92 126 aa9.47□□□□□ -0.89
CHAF1A-201ENST00000301280 SPACA4Q8TDM5 124 aa9.47□□□□□ -0.89
CHAF1A-201ENST00000301280 KRTAP10-2P60368 255 aa9.47□□□□□ -0.89
CHAF1A-201ENST00000301280 DNAH17Q9UFH2 4485 aa9.46□□□□□ -0.89
CHAF1A-201ENST00000301280 PRR15Q8IV56 129 aa9.46□□□□□ -0.9
CHAF1A-201ENST00000301280 KRTAP13-1Q8IUC0 172 aa9.45□□□□□ -0.9
CHAF1A-201ENST00000301280 DNAH2Q9P225 4427 aa9.41□□□□□ -0.9
CHAF1A-201ENST00000301280 A0A087X002 238 aa9.41□□□□□ -0.9
CHAF1A-201ENST00000301280 NOTCH2NLQ7Z3S9 236 aa9.41□□□□□ -0.9
CHAF1A-201ENST00000301280 FRAS1Q86XX4 4008 aa9.4□□□□□ -0.9
CHAF1A-201ENST00000301280 A8MWP4 228 aa9.4□□□□□ -0.9
CHAF1A-201ENST00000301280 SMR3BP02814 79 aaPredicted RBP9.38□□□□□ -0.91
CHAF1A-201ENST00000301280 A8MU10 97 aa9.38□□□□□ -0.91
CHAF1A-201ENST00000301280 ZNF861PO60384 105 aa9.38□□□□□ -0.91
CHAF1A-201ENST00000301280 DNAH8Q96JB1 4490 aa9.37□□□□□ -0.91
CHAF1A-201ENST00000301280 Q1T7F1 81 aa9.37□□□□□ -0.91
CHAF1A-201ENST00000301280 LINC00472Q9H8W2 130 aa9.36□□□□□ -0.91
CHAF1A-201ENST00000301280 TRAV22A0A0B4J277 110 aa9.34□□□□□ -0.91
CHAF1A-201ENST00000301280 KRTAP29-1A8MX34 341 aaPredicted RBP9.34□□□□□ -0.91
CHAF1A-201ENST00000301280 FLG2Q5D862 2391 aaPredicted RBP9.33□□□□□ -0.92
CHAF1A-201ENST00000301280 CYP4F30PQ9H0H9 118 aa9.33□□□□□ -0.92
CHAF1A-201ENST00000301280 WWC2-AS2Q96NR7 200 aa9.32□□□□□ -0.92
CHAF1A-201ENST00000301280 DNAH11Q96DT5 4516 aa9.31□□□□□ -0.92
CHAF1A-201ENST00000301280 IGLV7-43P04211 117 aa9.3□□□□□ -0.92
CHAF1A-201ENST00000301280 LINC00483Q53H64 154 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms