RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 KLKP1Q107X0 134 aa8.62□□□□□ -1.03
CASC4-201ENST00000299957 C1orf64Q8NEQ6 169 aa8.62□□□□□ -1.03
CASC4-201ENST00000299957 ANAPC11Q9NYG5 84 aa8.62□□□□□ -1.03
CASC4-201ENST00000299957 PRO0628Q9UI54 55 aa8.62□□□□□ -1.03
CASC4-201ENST00000299957 V9GYY9 64 aa8.62□□□□□ -1.03
CASC4-201ENST00000299957 TENM2Q9NT68 2774 aa8.61□□□□□ -1.03
CASC4-201ENST00000299957 PMAIP1Q13794 54 aa8.6□□□□□ -1.03
CASC4-201ENST00000299957 IGFL1Q6UW32 110 aa8.59□□□□□ -1.03
CASC4-201ENST00000299957 H3BNG1 76 aa8.59□□□□□ -1.03
CASC4-201ENST00000299957 MOBPQ13875 183 aa8.58□□□□□ -1.04
CASC4-201ENST00000299957 MDFIQ99750 246 aa8.56□□□□□ -1.04
CASC4-201ENST00000299957 A8MUN3 132 aa8.55□□□□□ -1.04
CASC4-201ENST00000299957 K7EIL1 84 aa8.55□□□□□ -1.04
CASC4-201ENST00000299957 SPAG11AQ6PDA7 123 aa8.53□□□□□ -1.04
CASC4-201ENST00000299957 BCE1O60756 84 aa8.53□□□□□ -1.04
CASC4-201ENST00000299957 C4orf48Q5BLP8 95 aa8.53□□□□□ -1.04
CASC4-201ENST00000299957 C16orf90A8MZG2 172 aa8.52□□□□□ -1.05
CASC4-201ENST00000299957 DMBT1Q9UGM3 2413 aaPredicted RBP8.52□□□□□ -1.05
CASC4-201ENST00000299957 hDV103S1A0JD37 113 aa8.51□□□□□ -1.05
CASC4-201ENST00000299957 FAM229BQ4G0N7 80 aa8.51□□□□□ -1.05
CASC4-201ENST00000299957 F8WDY8 70 aa8.5□□□□□ -1.05
CASC4-201ENST00000299957 IGLV5-52A0A0A0MRZ9 124 aa8.49□□□□□ -1.05
CASC4-201ENST00000299957 SPINK1P00995 79 aa8.49□□□□□ -1.05
CASC4-201ENST00000299957 Q5XG85 94 aa8.49□□□□□ -1.05
CASC4-201ENST00000299957 OCR1Q9BZK8 76 aa8.49□□□□□ -1.05
CASC4-201ENST00000299957 DSCR10P59022 87 aa8.47□□□□□ -1.05
CASC4-201ENST00000299957 TRRAPQ9Y4A5 3859 aa8.47□□□□□ -1.05
CASC4-201ENST00000299957 IGLV5-48A0A075B6I7 105 aa8.46□□□□□ -1.06
CASC4-201ENST00000299957 FP248Q71RG6 208 aaPredicted RBP8.46□□□□□ -1.06
CASC4-201ENST00000299957 TRAV22A0A0B4J277 110 aa8.45□□□□□ -1.06
CASC4-201ENST00000299957 NBDYA0A0U1RRE5 68 aa8.43□□□□□ -1.06
CASC4-201ENST00000299957 KRTAP26-1Q6PEX3 210 aa8.42□□□□□ -1.06
CASC4-201ENST00000299957 ZNF706Q9Y5V0 76 aaPredicted RBP8.41□□□□□ -1.06
CASC4-201ENST00000299957 IGKV2D-30A0A075B6S6 120 aa8.41□□□□□ -1.06
CASC4-201ENST00000299957 IGKV2-30P06310 120 aa8.41□□□□□ -1.06
CASC4-201ENST00000299957 NUPR2A6NF83 97 aa8.4□□□□□ -1.06
CASC4-201ENST00000299957 PRR15Q8IV56 129 aa8.4□□□□□ -1.06
CASC4-201ENST00000299957 KRTAP1-5Q9BYS1 174 aa8.39□□□□□ -1.07
CASC4-201ENST00000299957 A8MWP4 228 aa8.39□□□□□ -1.07
CASC4-201ENST00000299957 SPACA4Q8TDM5 124 aa8.39□□□□□ -1.07
CASC4-201ENST00000299957 IGLV8-61A0A075B6I0 122 aa8.38□□□□□ -1.07
CASC4-201ENST00000299957 TLX1NBP0CAT3 122 aa8.37□□□□□ -1.07
CASC4-201ENST00000299957 TGP01266 2768 aa8.37□□□□□ -1.07
CASC4-201ENST00000299957 SRRM2Q9UQ35 2752 aaKnown RBP8.37□□□□□ -1.07
CASC4-201ENST00000299957 RTL8CO15255 209 aa8.37□□□□□ -1.07
CASC4-201ENST00000299957 C1orf134Q5TEV5 83 aa8.36□□□□□ -1.07
CASC4-201ENST00000299957 SEC61GP60059 68 aa8.35□□□□□ -1.07
CASC4-201ENST00000299957 COA5Q86WW8 74 aa8.34□□□□□ -1.07
CASC4-201ENST00000299957 A0A1B0GW54 56 aa8.34□□□□□ -1.07
CASC4-201ENST00000299957 C9orf163Q8N9P6 203 aa8.34□□□□□ -1.07
CASC4-201ENST00000299957 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.31□□□□□ -1.08
CASC4-201ENST00000299957 ZNF469Q96JG9 3925 aaPredicted RBP8.31□□□□□ -1.08
CASC4-201ENST00000299957 PLA2G2DQ9UNK4 145 aa8.3□□□□□ -1.08
CASC4-201ENST00000299957 SPRR4Q96PI1 79 aa8.3□□□□□ -1.08
CASC4-201ENST00000299957 LIMD2Q9BT23 127 aa8.3□□□□□ -1.08
CASC4-201ENST00000299957 PSORS1C2Q9UIG4 136 aa8.29□□□□□ -1.08
CASC4-201ENST00000299957 C8orf17Q9NRJ1 99 aa8.28□□□□□ -1.08
CASC4-201ENST00000299957 WIPF1O43516 503 aa8.26□□□□□ -1.09
CASC4-201ENST00000299957 SPRR1AP35321 89 aa8.26□□□□□ -1.09
CASC4-201ENST00000299957 PRR26Q8N8Z3 221 aa8.26□□□□□ -1.09
CASC4-201ENST00000299957 PANO1I0J062 215 aa8.26□□□□□ -1.09
CASC4-201ENST00000299957 MRPL34Q9BQ48 92 aaKnown RBP8.25□□□□□ -1.09
CASC4-201ENST00000299957 APLNQ9ULZ1 77 aa8.25□□□□□ -1.09
CASC4-201ENST00000299957 CNBPP62633 177 aaKnown RBP8.25□□□□□ -1.09
CASC4-201ENST00000299957 A0A087WTM6 91 aa8.24□□□□□ -1.09
CASC4-201ENST00000299957 KRTAP7-1Q8IUC3 87 aa8.24□□□□□ -1.09
CASC4-201ENST00000299957 IGLV5-37A0A075B6J1 123 aa8.23□□□□□ -1.09
CASC4-201ENST00000299957 KRTAP11-1Q8IUC1 163 aa8.23□□□□□ -1.09
CASC4-201ENST00000299957 TP53AIP1Q9HCN2 124 aa8.23□□□□□ -1.09
CASC4-201ENST00000299957 FLG2Q5D862 2391 aaPredicted RBP8.21□□□□□ -1.09
CASC4-201ENST00000299957 A0A1B0GVX0 72 aa8.21□□□□□ -1.1
CASC4-201ENST00000299957 KRTAP4-16G5E9R7 235 aaPredicted RBP8.2□□□□□ -1.1
CASC4-201ENST00000299957 LINC00313P59037 77 aa8.2□□□□□ -1.1
CASC4-201ENST00000299957 ZNF861PO60384 105 aa8.19□□□□□ -1.1
CASC4-201ENST00000299957 TNP2Q05952 138 aa8.19□□□□□ -1.1
CASC4-201ENST00000299957 CSMD3Q7Z407 3707 aa8.19□□□□□ -1.1
CASC4-201ENST00000299957 A0A1B0GU69 56 aa8.18□□□□□ -1.1
CASC4-201ENST00000299957 COL7A1Q02388 2944 aa8.18□□□□□ -1.1
CASC4-201ENST00000299957 H3BPC8 53 aa8.17□□□□□ -1.1
CASC4-201ENST00000299957 C7orf65Q6ZTY9 151 aa8.17□□□□□ -1.1
CASC4-201ENST00000299957 ACYP2P14621 99 aa8.15□□□□□ -1.11
CASC4-201ENST00000299957 SMR3BP02814 79 aaPredicted RBP8.14□□□□□ -1.11
CASC4-201ENST00000299957 MMP24-AS1A0A0U1RRL7 71 aa8.13□□□□□ -1.11
CASC4-201ENST00000299957 LOC101927531A0A1B0GV80 90 aa8.13□□□□□ -1.11
CASC4-201ENST00000299957 A8MU10 97 aa8.13□□□□□ -1.11
CASC4-201ENST00000299957 Q96NJ1 140 aa8.13□□□□□ -1.11
CASC4-201ENST00000299957 LINC00472Q9H8W2 130 aa8.12□□□□□ -1.11
CASC4-201ENST00000299957 ATP11AUNQ6ZP68 121 aa8.12□□□□□ -1.11
CASC4-201ENST00000299957 PLA2G1BP04054 148 aaKnown RBP8.12□□□□□ -1.11
CASC4-201ENST00000299957 Q8N9P0 234 aaPredicted RBP8.11□□□□□ -1.11
CASC4-201ENST00000299957 CD164Q04900 197 aa8.1□□□□□ -1.11
CASC4-201ENST00000299957 TYMSOSQ8TAI1 123 aa8.09□□□□□ -1.11
CASC4-201ENST00000299957 Q1T7F1 81 aa8.09□□□□□ -1.11
CASC4-201ENST00000299957 A0A087X002 238 aa8.08□□□□□ -1.12
CASC4-201ENST00000299957 NOTCH2NLQ7Z3S9 236 aa8.08□□□□□ -1.12
CASC4-201ENST00000299957 IGLV7-43P04211 117 aa8.08□□□□□ -1.12
CASC4-201ENST00000299957 Q8N1X5 172 aa8.07□□□□□ -1.12
CASC4-201ENST00000299957 C9orf92A6NGG3 77 aa8.06□□□□□ -1.12
CASC4-201ENST00000299957 CYP4F30PQ9H0H9 118 aa8.06□□□□□ -1.12
CASC4-201ENST00000299957 FBN3Q75N90 2809 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms