RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 CMYA5Q8N3K9 4069 aa8.49□□□□□ -1.05
CDH8-201ENST00000299345 HCG22E2RYF7 251 aa8.49□□□□□ -1.05
CDH8-201ENST00000299345 KRTAP11-1Q8IUC1 163 aa8.49□□□□□ -1.05
CDH8-201ENST00000299345 H0Y9J4 135 aa8.48□□□□□ -1.05
CDH8-201ENST00000299345 ATP5EP56381 51 aaPredicted RBP8.47□□□□□ -1.05
CDH8-201ENST00000299345 DNAH3Q8TD57 4116 aa8.46□□□□□ -1.05
CDH8-201ENST00000299345 IGLV8-61A0A075B6I0 122 aa8.46□□□□□ -1.05
CDH8-201ENST00000299345 OXTP01178 125 aa8.45□□□□□ -1.06
CDH8-201ENST00000299345 IGLV9-49A0A0B4J1Y8 123 aa8.45□□□□□ -1.06
CDH8-201ENST00000299345 A0A0U1RQV1 116 aa8.45□□□□□ -1.06
CDH8-201ENST00000299345 PANO1I0J062 215 aa8.44□□□□□ -1.06
CDH8-201ENST00000299345 RPL37AP61513 92 aaKnown RBP8.44□□□□□ -1.06
CDH8-201ENST00000299345 A0A087WTM6 91 aa8.43□□□□□ -1.06
CDH8-201ENST00000299345 SVIPQ8NHG7 77 aa8.43□□□□□ -1.06
CDH8-201ENST00000299345 SPRR1BP22528 89 aa8.43□□□□□ -1.06
CDH8-201ENST00000299345 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.43□□□□□ -1.06
CDH8-201ENST00000299345 Q6ZRN7 208 aaPredicted RBP8.42□□□□□ -1.06
CDH8-201ENST00000299345 MP68P56378 58 aa8.42□□□□□ -1.06
CDH8-201ENST00000299345 C5orf47Q569G3 176 aa8.41□□□□□ -1.06
CDH8-201ENST00000299345 RTL8CO15255 209 aa8.41□□□□□ -1.06
CDH8-201ENST00000299345 NDUFB1O75438 58 aa8.41□□□□□ -1.06
CDH8-201ENST00000299345 COL7A1Q02388 2944 aa8.4□□□□□ -1.06
CDH8-201ENST00000299345 SMIM26A0A096LP01 95 aa8.39□□□□□ -1.07
CDH8-201ENST00000299345 CASC2Q6XLA1 102 aa8.39□□□□□ -1.07
CDH8-201ENST00000299345 SPACA4Q8TDM5 124 aa8.39□□□□□ -1.07
CDH8-201ENST00000299345 C4orf26Q17RF5 130 aa8.39□□□□□ -1.07
CDH8-201ENST00000299345 HRCT1Q6UXD1 115 aa8.39□□□□□ -1.07
CDH8-201ENST00000299345 ZNF706Q9Y5V0 76 aaPredicted RBP8.38□□□□□ -1.07
CDH8-201ENST00000299345 IGLV5-52A0A0A0MRZ9 124 aa8.37□□□□□ -1.07
CDH8-201ENST00000299345 C1orf134Q5TEV5 83 aa8.36□□□□□ -1.07
CDH8-201ENST00000299345 A8MWP4 228 aa8.36□□□□□ -1.07
CDH8-201ENST00000299345 LY6G6CO95867 125 aa8.36□□□□□ -1.07
CDH8-201ENST00000299345 PRR15Q8IV56 129 aa8.36□□□□□ -1.07
CDH8-201ENST00000299345 CDK2AP2O75956 126 aa8.35□□□□□ -1.07
CDH8-201ENST00000299345 LINC00208Q96KT6 92 aa8.34□□□□□ -1.07
CDH8-201ENST00000299345 SRRM2Q9UQ35 2752 aaKnown RBP8.34□□□□□ -1.08
CDH8-201ENST00000299345 PSORS1C2Q9UIG4 136 aa8.33□□□□□ -1.08
CDH8-201ENST00000299345 PRR4Q16378 134 aa8.33□□□□□ -1.08
CDH8-201ENST00000299345 Q5XG85 94 aa8.32□□□□□ -1.08
CDH8-201ENST00000299345 KRTAP13-1Q8IUC0 172 aa8.31□□□□□ -1.08
CDH8-201ENST00000299345 LINC00472Q9H8W2 130 aa8.31□□□□□ -1.08
CDH8-201ENST00000299345 DNAH10Q8IVF4 4471 aa8.31□□□□□ -1.08
CDH8-201ENST00000299345 MOBPQ13875 183 aa8.31□□□□□ -1.08
CDH8-201ENST00000299345 DNAH9Q9NYC9 4486 aa8.31□□□□□ -1.08
CDH8-201ENST00000299345 MPLKIPQ8TAP9 179 aa8.3□□□□□ -1.08
CDH8-201ENST00000299345 H0Y9P7 68 aa8.3□□□□□ -1.08
CDH8-201ENST00000299345 DNAH1Q9P2D7 4330 aa8.29□□□□□ -1.08
CDH8-201ENST00000299345 ANAPC11Q9NYG5 84 aa8.29□□□□□ -1.08
CDH8-201ENST00000299345 LCE6AA0A183 80 aa8.28□□□□□ -1.08
CDH8-201ENST00000299345 ZNF861PO60384 105 aa8.28□□□□□ -1.08
CDH8-201ENST00000299345 Q6ZR54 194 aa8.27□□□□□ -1.09
CDH8-201ENST00000299345 NDUFS5O43920 106 aa8.27□□□□□ -1.09
CDH8-201ENST00000299345 hDV103S1A0JD37 113 aa8.26□□□□□ -1.09
CDH8-201ENST00000299345 PLAC8Q9NZF1 115 aa8.26□□□□□ -1.09
CDH8-201ENST00000299345 KRTAP29-1A8MX34 341 aaPredicted RBP8.25□□□□□ -1.09
CDH8-201ENST00000299345 IGHV6-1A0A0B4J1U7 121 aa8.25□□□□□ -1.09
CDH8-201ENST00000299345 CSMD3Q7Z407 3707 aa8.24□□□□□ -1.09
CDH8-201ENST00000299345 ZCCHC13Q8WW36 166 aaKnown RBP8.24□□□□□ -1.09
CDH8-201ENST00000299345 FP248Q71RG6 208 aaPredicted RBP8.24□□□□□ -1.09
CDH8-201ENST00000299345 C1orf64Q8NEQ6 169 aa8.23□□□□□ -1.09
CDH8-201ENST00000299345 LYSTQ99698 3801 aa8.23□□□□□ -1.09
CDH8-201ENST00000299345 LINC00483Q53H64 154 aa8.23□□□□□ -1.09
CDH8-201ENST00000299345 SPINK6Q6UWN8 80 aa8.22□□□□□ -1.09
CDH8-201ENST00000299345 TRAV22A0A0B4J277 110 aa8.21□□□□□ -1.09
CDH8-201ENST00000299345 H3BPC8 53 aa8.21□□□□□ -1.09
CDH8-201ENST00000299345 WWC2-AS2Q96NR7 200 aa8.21□□□□□ -1.09
CDH8-201ENST00000299345 CIRBP-AS1Q8TBR5 109 aa8.21□□□□□ -1.1
CDH8-201ENST00000299345 TGP01266 2768 aa8.21□□□□□ -1.1
CDH8-201ENST00000299345 MMP24-AS1A0A0U1RRL7 71 aa8.2□□□□□ -1.1
CDH8-201ENST00000299345 FAM229BQ4G0N7 80 aa8.2□□□□□ -1.1
CDH8-201ENST00000299345 PLECQ15149 4684 aaKnown RBP8.2□□□□□ -1.1
CDH8-201ENST00000299345 IGLV7-43P04211 117 aa8.19□□□□□ -1.1
CDH8-201ENST00000299345 C8orf17Q9NRJ1 99 aa8.18□□□□□ -1.1
CDH8-201ENST00000299345 TP53AIP1Q9HCN2 124 aa8.17□□□□□ -1.1
CDH8-201ENST00000299345 A0A1B0GVX0 72 aa8.16□□□□□ -1.1
CDH8-201ENST00000299345 CYP4F30PQ9H0H9 118 aa8.14□□□□□ -1.11
CDH8-201ENST00000299345 PCOTHQ58A44 107 aa8.14□□□□□ -1.11
CDH8-201ENST00000299345 Q96NJ1 140 aa8.14□□□□□ -1.11
CDH8-201ENST00000299345 BRK1Q8WUW1 75 aa8.13□□□□□ -1.11
CDH8-201ENST00000299345 LINC00336Q6ZUF6 198 aa8.13□□□□□ -1.11
CDH8-201ENST00000299345 MRPL34Q9BQ48 92 aaKnown RBP8.11□□□□□ -1.11
CDH8-201ENST00000299345 MEGF8Q7Z7M0 2845 aa8.1□□□□□ -1.11
CDH8-201ENST00000299345 KRTAP10-2P60368 255 aa8.1□□□□□ -1.11
CDH8-201ENST00000299345 SPANXA2-OT1Q8N9U9 137 aa8.09□□□□□ -1.11
CDH8-201ENST00000299345 DNAH7Q8WXX0 4024 aa8.09□□□□□ -1.11
CDH8-201ENST00000299345 SSBP3-AS1Q7Z2R9 100 aa8.09□□□□□ -1.11
CDH8-201ENST00000299345 DYNC2H1Q8NCM8 4307 aaKnown RBP8.08□□□□□ -1.12
CDH8-201ENST00000299345 STARD9Q9P2P6 4700 aa8.06□□□□□ -1.12
CDH8-201ENST00000299345 PRO0628Q9UI54 55 aa8.06□□□□□ -1.12
CDH8-201ENST00000299345 PSPHP1O15172 72 aa8.06□□□□□ -1.12
CDH8-201ENST00000299345 V9GYY9 64 aa8.05□□□□□ -1.12
CDH8-201ENST00000299345 VPS13DQ5THJ4 4388 aa8.05□□□□□ -1.12
CDH8-201ENST00000299345 CD164Q04900 197 aa8.03□□□□□ -1.12
CDH8-201ENST00000299345 A0A087X002 238 aa8.03□□□□□ -1.12
CDH8-201ENST00000299345 NOTCH2NLQ7Z3S9 236 aa8.03□□□□□ -1.12
CDH8-201ENST00000299345 PRKDCP78527 4128 aaKnown RBP8.02□□□□□ -1.13
CDH8-201ENST00000299345 Q1T7F1 81 aa8.01□□□□□ -1.13
CDH8-201ENST00000299345 ASB16-AS1Q495Z4 193 aa8.01□□□□□ -1.13
CDH8-201ENST00000299345 KRTAP10-1P60331 282 aa8□□□□□ -1.13
CDH8-201ENST00000299345 C4orf48Q5BLP8 95 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms