RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.86□□□□□ -1.47
PRDM9-201ENST00000296682 TMEM258P61165 79 aa5.86□□□□□ -1.47
PRDM9-201ENST00000296682 C9orf163Q8N9P6 203 aa5.86□□□□□ -1.47
PRDM9-201ENST00000296682 H0Y9J4 135 aa5.86□□□□□ -1.47
PRDM9-201ENST00000296682 IGLV5-52A0A0A0MRZ9 124 aa5.85□□□□□ -1.47
PRDM9-201ENST00000296682 PRR4Q16378 134 aa5.84□□□□□ -1.47
PRDM9-201ENST00000296682 VPS13DQ5THJ4 4388 aa5.84□□□□□ -1.47
PRDM9-201ENST00000296682 RTL8CO15255 209 aa5.84□□□□□ -1.48
PRDM9-201ENST00000296682 C1orf134Q5TEV5 83 aa5.84□□□□□ -1.48
PRDM9-201ENST00000296682 Q8NBF4 154 aa5.84□□□□□ -1.48
PRDM9-201ENST00000296682 IGFL1Q6UW32 110 aa5.83□□□□□ -1.48
PRDM9-201ENST00000296682 A0A087WTM6 91 aa5.83□□□□□ -1.48
PRDM9-201ENST00000296682 CNBPP62633 177 aaKnown RBP5.83□□□□□ -1.48
PRDM9-201ENST00000296682 SPINK6Q6UWN8 80 aa5.83□□□□□ -1.48
PRDM9-201ENST00000296682 MEGF8Q7Z7M0 2845 aa5.82□□□□□ -1.48
PRDM9-201ENST00000296682 A0A1B0GW54 56 aa5.82□□□□□ -1.48
PRDM9-201ENST00000296682 CXCL6P80162 114 aa5.82□□□□□ -1.48
PRDM9-201ENST00000296682 SMIM29Q86T20 159 aa5.82□□□□□ -1.48
PRDM9-201ENST00000296682 DNAH10Q8IVF4 4471 aa5.82□□□□□ -1.48
PRDM9-201ENST00000296682 K7EQZ3 153 aa5.81□□□□□ -1.48
PRDM9-201ENST00000296682 C4orf26Q17RF5 130 aa5.81□□□□□ -1.48
PRDM9-201ENST00000296682 TRAV7A0A075B6U4 112 aa5.8□□□□□ -1.48
PRDM9-201ENST00000296682 TNP2Q05952 138 aa5.8□□□□□ -1.48
PRDM9-201ENST00000296682 LINC00474Q9P2X8 69 aa5.8□□□□□ -1.48
PRDM9-201ENST00000296682 IGLV5-48A0A075B6I7 105 aa5.8□□□□□ -1.48
PRDM9-201ENST00000296682 FBN3Q75N90 2809 aa5.79□□□□□ -1.48
PRDM9-201ENST00000296682 NDUFS5O43920 106 aa5.79□□□□□ -1.48
PRDM9-201ENST00000296682 HECTD4Q9Y4D8 3996 aa5.79□□□□□ -1.48
PRDM9-201ENST00000296682 IGKV4-1P06312 121 aa5.78□□□□□ -1.48
PRDM9-201ENST00000296682 MOBPQ13875 183 aa5.77□□□□□ -1.49
PRDM9-201ENST00000296682 CIRBP-AS1Q8TBR5 109 aa5.77□□□□□ -1.49
PRDM9-201ENST00000296682 PKIGQ9Y2B9 76 aa5.77□□□□□ -1.49
PRDM9-201ENST00000296682 PSORS1C2Q9UIG4 136 aa5.76□□□□□ -1.49
PRDM9-201ENST00000296682 PLECQ15149 4684 aaKnown RBP5.76□□□□□ -1.49
PRDM9-201ENST00000296682 TMEM254Q8TBM7 123 aa5.76□□□□□ -1.49
PRDM9-201ENST00000296682 CDK2AP2O75956 126 aa5.76□□□□□ -1.49
PRDM9-201ENST00000296682 FAM236DA0A1B0GTK5 79 aa5.75□□□□□ -1.49
PRDM9-201ENST00000296682 FAM236CP0DP71 79 aa5.75□□□□□ -1.49
PRDM9-201ENST00000296682 Q6ZRN7 208 aaPredicted RBP5.74□□□□□ -1.49
PRDM9-201ENST00000296682 PRO0628Q9UI54 55 aa5.74□□□□□ -1.49
PRDM9-201ENST00000296682 DNAH2Q9P225 4427 aa5.73□□□□□ -1.49
PRDM9-201ENST00000296682 DSCR10P59022 87 aa5.73□□□□□ -1.49
PRDM9-201ENST00000296682 Q5XG85 94 aa5.73□□□□□ -1.49
PRDM9-201ENST00000296682 FRAS1Q86XX4 4008 aa5.73□□□□□ -1.49
PRDM9-201ENST00000296682 IGLV8-61A0A075B6I0 122 aa5.73□□□□□ -1.49
PRDM9-201ENST00000296682 OXTP01178 125 aa5.72□□□□□ -1.49
PRDM9-201ENST00000296682 DNAH17Q9UFH2 4485 aa5.72□□□□□ -1.49
PRDM9-201ENST00000296682 IGHV6-1A0A0B4J1U7 121 aa5.72□□□□□ -1.49
PRDM9-201ENST00000296682 NDUFB1O75438 58 aa5.72□□□□□ -1.49
PRDM9-201ENST00000296682 HCG22E2RYF7 251 aa5.72□□□□□ -1.49
PRDM9-201ENST00000296682 SPRR4Q96PI1 79 aa5.71□□□□□ -1.49
PRDM9-201ENST00000296682 DNHD1Q96M86 4753 aa5.71□□□□□ -1.49
PRDM9-201ENST00000296682 LINC00208Q96KT6 92 aa5.71□□□□□ -1.5
PRDM9-201ENST00000296682 SPACA4Q8TDM5 124 aa5.71□□□□□ -1.5
PRDM9-201ENST00000296682 MPLKIPQ8TAP9 179 aa5.7□□□□□ -1.5
PRDM9-201ENST00000296682 STARD9Q9P2P6 4700 aa5.7□□□□□ -1.5
PRDM9-201ENST00000296682 KRTAP10-2P60368 255 aa5.7□□□□□ -1.5
PRDM9-201ENST00000296682 CASC2Q6XLA1 102 aa5.7□□□□□ -1.5
PRDM9-201ENST00000296682 LCE6AA0A183 80 aa5.69□□□□□ -1.5
PRDM9-201ENST00000296682 H7BZZ5 65 aa5.69□□□□□ -1.5
PRDM9-201ENST00000296682 SERP1Q9Y6X1 66 aa5.69□□□□□ -1.5
PRDM9-201ENST00000296682 DNAH8Q96JB1 4490 aa5.68□□□□□ -1.5
PRDM9-201ENST00000296682 SPRR1BP22528 89 aa5.68□□□□□ -1.5
PRDM9-201ENST00000296682 MP68P56378 58 aa5.68□□□□□ -1.5
PRDM9-201ENST00000296682 WWC2-AS2Q96NR7 200 aa5.68□□□□□ -1.5
PRDM9-201ENST00000296682 LINC00336Q6ZUF6 198 aa5.68□□□□□ -1.5
PRDM9-201ENST00000296682 RETNLBQ9BQ08 111 aa5.68□□□□□ -1.5
PRDM9-201ENST00000296682 ZNF861PO60384 105 aa5.66□□□□□ -1.5
PRDM9-201ENST00000296682 C1orf195Q5TG92 126 aa5.66□□□□□ -1.5
PRDM9-201ENST00000296682 SMR3BP02814 79 aaPredicted RBP5.66□□□□□ -1.5
PRDM9-201ENST00000296682 SMIM26A0A096LP01 95 aa5.65□□□□□ -1.5
PRDM9-201ENST00000296682 KLKP1Q107X0 134 aa5.65□□□□□ -1.5
PRDM9-201ENST00000296682 PCOTHQ58A44 107 aa5.65□□□□□ -1.5
PRDM9-201ENST00000296682 Q6ZR54 194 aa5.65□□□□□ -1.5
PRDM9-201ENST00000296682 OCR1Q9BZK8 76 aa5.65□□□□□ -1.5
PRDM9-201ENST00000296682 KRTAP13-1Q8IUC0 172 aa5.65□□□□□ -1.51
PRDM9-201ENST00000296682 ZNF706Q9Y5V0 76 aaPredicted RBP5.65□□□□□ -1.51
PRDM9-201ENST00000296682 BRK1Q8WUW1 75 aa5.64□□□□□ -1.51
PRDM9-201ENST00000296682 A0A0U1RQV1 116 aa5.63□□□□□ -1.51
PRDM9-201ENST00000296682 H0Y9P7 68 aa5.62□□□□□ -1.51
PRDM9-201ENST00000296682 PKD1P98161 4303 aa5.62□□□□□ -1.51
PRDM9-201ENST00000296682 IGLV7-43P04211 117 aa5.62□□□□□ -1.51
PRDM9-201ENST00000296682 PRR15Q8IV56 129 aa5.62□□□□□ -1.51
PRDM9-201ENST00000296682 ALMS1Q8TCU4 4167 aa5.61□□□□□ -1.51
PRDM9-201ENST00000296682 hDV103S1A0JD37 113 aa5.61□□□□□ -1.51
PRDM9-201ENST00000296682 A8MWP4 228 aa5.61□□□□□ -1.51
PRDM9-201ENST00000296682 H3BS24 57 aa5.6□□□□□ -1.51
PRDM9-201ENST00000296682 KRTAP10-1P60331 282 aa5.6□□□□□ -1.51
PRDM9-201ENST00000296682 DNAH11Q96DT5 4516 aa5.6□□□□□ -1.51
PRDM9-201ENST00000296682 NDUFC1O43677 76 aa5.6□□□□□ -1.51
PRDM9-201ENST00000296682 PLAC8Q9NZF1 115 aa5.59□□□□□ -1.51
PRDM9-201ENST00000296682 KMT2AQ03164 3969 aa5.59□□□□□ -1.51
PRDM9-201ENST00000296682 C1orf64Q8NEQ6 169 aa5.58□□□□□ -1.52
PRDM9-201ENST00000296682 LINC00472Q9H8W2 130 aa5.58□□□□□ -1.52
PRDM9-201ENST00000296682 ATP5EP56381 51 aaPredicted RBP5.57□□□□□ -1.52
PRDM9-201ENST00000296682 LINC00483Q53H64 154 aa5.56□□□□□ -1.52
PRDM9-201ENST00000296682 A0A087X002 238 aa5.55□□□□□ -1.52
PRDM9-201ENST00000296682 NOTCH2NLQ7Z3S9 236 aa5.55□□□□□ -1.52
PRDM9-201ENST00000296682 PLA2G1BP04054 148 aaKnown RBP5.55□□□□□ -1.52
PRDM9-201ENST00000296682 FP248Q71RG6 208 aaPredicted RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms