RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 SIGMAR1Q99720 223 aa13.94□□□□□ -0.18
PTX3-201ENST00000295927 LINC00846Q9NV44 126 aa13.94□□□□□ -0.18
PTX3-201ENST00000295927 PKHD1P08F94 4074 aa13.93□□□□□ -0.18
PTX3-201ENST00000295927 IGLV7-43P04211 117 aa13.91□□□□□ -0.18
PTX3-201ENST00000295927 MT-ATP8P03928 68 aa13.9□□□□□ -0.18
PTX3-201ENST00000295927 F8WEM9 126 aa13.9□□□□□ -0.18
PTX3-201ENST00000295927 SPRR4Q96PI1 79 aa13.88□□□□□ -0.19
PTX3-201ENST00000295927 LRP1BQ9NZR2 4599 aa13.87□□□□□ -0.19
PTX3-201ENST00000295927 C21orf62-AS1Q17RA5 79 aa13.86□□□□□ -0.19
PTX3-201ENST00000295927 LINC00643Q86TS7 51 aa13.84□□□□□ -0.19
PTX3-201ENST00000295927 ZNF706Q9Y5V0 76 aaPredicted RBP13.84□□□□□ -0.19
PTX3-201ENST00000295927 DYNC1H1Q14204 4646 aaKnown RBP13.83□□□□□ -0.19
PTX3-201ENST00000295927 IGLV8-61A0A075B6I0 122 aa13.83□□□□□ -0.2
PTX3-201ENST00000295927 LINC00483Q53H64 154 aa13.82□□□□□ -0.2
PTX3-201ENST00000295927 A0A1W2PNM2 257 aa13.8□□□□□ -0.2
PTX3-201ENST00000295927 IGFL1Q6UW32 110 aa13.79□□□□□ -0.2
PTX3-201ENST00000295927 UBL5Q9BZL1 73 aa13.78□□□□□ -0.2
PTX3-201ENST00000295927 A0A0G2JQZ4 141 aa13.78□□□□□ -0.2
PTX3-201ENST00000295927 Q8NBF4 154 aa13.77□□□□□ -0.21
PTX3-201ENST00000295927 ANAPC11Q9NYG5 84 aa13.74□□□□□ -0.21
PTX3-201ENST00000295927 Q6ZVQ6 151 aa13.73□□□□□ -0.21
PTX3-201ENST00000295927 RYR3Q15413 4870 aa13.73□□□□□ -0.21
PTX3-201ENST00000295927 Q6JHZ5 121 aa13.72□□□□□ -0.21
PTX3-201ENST00000295927 IGLV9-49A0A0B4J1Y8 123 aa13.72□□□□□ -0.21
PTX3-201ENST00000295927 A0A1B0GW54 56 aa13.71□□□□□ -0.21
PTX3-201ENST00000295927 IGKV3D-7A0A0C4DH55 119 aa13.7□□□□□ -0.22
PTX3-201ENST00000295927 TRBV7-7A0A0K0K1E9 115 aa13.69□□□□□ -0.22
PTX3-201ENST00000295927 CRYGAP11844 174 aa13.68□□□□□ -0.22
PTX3-201ENST00000295927 C9orf153Q5TBE3 101 aa13.68□□□□□ -0.22
PTX3-201ENST00000295927 VPS13BQ7Z7G8 4022 aa13.68□□□□□ -0.22
PTX3-201ENST00000295927 APOBP04114 4563 aaKnown RBP13.67□□□□□ -0.22
PTX3-201ENST00000295927 SMR3BP02814 79 aaPredicted RBP13.65□□□□□ -0.22
PTX3-201ENST00000295927 RPL37AP61513 92 aaKnown RBP13.64□□□□□ -0.23
PTX3-201ENST00000295927 Q6Q795 121 aa13.64□□□□□ -0.23
PTX3-201ENST00000295927 NREPQ16612 68 aa13.64□□□□□ -0.23
PTX3-201ENST00000295927 IMUPQ9GZP8 106 aa13.64□□□□□ -0.23
PTX3-201ENST00000295927 ATP5EP2Q5VTU8 51 aa13.63□□□□□ -0.23
PTX3-201ENST00000295927 MOBPQ13875 183 aa13.62□□□□□ -0.23
PTX3-201ENST00000295927 SCGB1A1P11684 91 aa13.61□□□□□ -0.23
PTX3-201ENST00000295927 A0A087WSZ3 146 aa13.58□□□□□ -0.24
PTX3-201ENST00000295927 CXCL6P80162 114 aa13.56□□□□□ -0.24
PTX3-201ENST00000295927 KRTAP1-4P0C5Y4 121 aa13.52□□□□□ -0.24
PTX3-201ENST00000295927 HIST1H4AP62805 103 aaKnown RBP13.52□□□□□ -0.25
PTX3-201ENST00000295927 SPINK6Q6UWN8 80 aa13.52□□□□□ -0.25
PTX3-201ENST00000295927 A0A087X002 238 aa13.51□□□□□ -0.25
PTX3-201ENST00000295927 PCP4P48539 62 aa13.51□□□□□ -0.25
PTX3-201ENST00000295927 FAM229BQ4G0N7 80 aa13.51□□□□□ -0.25
PTX3-201ENST00000295927 BPY2O14599 106 aa13.5□□□□□ -0.25
PTX3-201ENST00000295927 HRCT1Q6UXD1 115 aa13.5□□□□□ -0.25
PTX3-201ENST00000295927 A0A087WVE0 104 aa13.49□□□□□ -0.25
PTX3-201ENST00000295927 KRTAP10-4P60372 401 aaPredicted RBP13.49□□□□□ -0.25
PTX3-201ENST00000295927 FAT1Q14517 4588 aa13.48□□□□□ -0.25
PTX3-201ENST00000295927 KRTAP13-2Q52LG2 175 aa13.47□□□□□ -0.25
PTX3-201ENST00000295927 SSBP3-AS1Q7Z2R9 100 aa13.47□□□□□ -0.25
PTX3-201ENST00000295927 FAM236AA0A1B0GUQ0 79 aa13.45□□□□□ -0.26
PTX3-201ENST00000295927 FAM236BA0A1B0GV22 79 aa13.45□□□□□ -0.26
PTX3-201ENST00000295927 PLA2G1BP04054 148 aaKnown RBP13.43□□□□□ -0.26
PTX3-201ENST00000295927 DEFB116Q30KQ4 102 aa13.41□□□□□ -0.26
PTX3-201ENST00000295927 Q8N9L7 120 aa13.41□□□□□ -0.26
PTX3-201ENST00000295927 CDK2AP2O75956 126 aa13.41□□□□□ -0.26
PTX3-201ENST00000295927 DSCR10P59022 87 aa13.39□□□□□ -0.27
PTX3-201ENST00000295927 LINC00472Q9H8W2 130 aa13.38□□□□□ -0.27
PTX3-201ENST00000295927 IGKV4-1P06312 121 aa13.37□□□□□ -0.27
PTX3-201ENST00000295927 CD164Q04900 197 aa13.37□□□□□ -0.27
PTX3-201ENST00000295927 SS18L2Q9UHA2 77 aa13.36□□□□□ -0.27
PTX3-201ENST00000295927 FAM229AH3BQW9 127 aa13.35□□□□□ -0.27
PTX3-201ENST00000295927 HSPG2P98160 4391 aa13.33□□□□□ -0.27
PTX3-201ENST00000295927 Q96NJ1 140 aa13.31□□□□□ -0.28
PTX3-201ENST00000295927 K7EQZ3 153 aa13.31□□□□□ -0.28
PTX3-201ENST00000295927 TYMSOSQ8TAI1 123 aa13.31□□□□□ -0.28
PTX3-201ENST00000295927 ANAPC13Q9BS18 74 aa13.31□□□□□ -0.28
PTX3-201ENST00000295927 PRR26Q8N8Z3 221 aa13.29□□□□□ -0.28
PTX3-201ENST00000295927 Q5VSD8 79 aa13.27□□□□□ -0.29
PTX3-201ENST00000295927 RYR1P21817 5038 aa13.27□□□□□ -0.29
PTX3-201ENST00000295927 J3KT08 172 aa13.25□□□□□ -0.29
PTX3-201ENST00000295927 PKHD1L1Q86WI1 4243 aa13.25□□□□□ -0.29
PTX3-201ENST00000295927 ATOX1O00244 68 aa13.25□□□□□ -0.29
PTX3-201ENST00000295927 EPPK1P58107 5090 aaKnown RBP13.24□□□□□ -0.29
PTX3-201ENST00000295927 A8MWP4 228 aa13.22□□□□□ -0.29
PTX3-201ENST00000295927 C4orf48Q5BLP8 95 aa13.19□□□□□ -0.3
PTX3-201ENST00000295927 PRR15Q8IV56 129 aa13.19□□□□□ -0.3
PTX3-201ENST00000295927 KRTAP17-1Q9BYP8 105 aa13.19□□□□□ -0.3
PTX3-201ENST00000295927 ASB16-AS1Q495Z4 193 aa13.18□□□□□ -0.3
PTX3-201ENST00000295927 Q5XG85 94 aa13.17□□□□□ -0.3
PTX3-201ENST00000295927 KIAA1109Q2LD37 5005 aa13.16□□□□□ -0.3
PTX3-201ENST00000295927 NDUFB1O75438 58 aa13.14□□□□□ -0.31
PTX3-201ENST00000295927 LINC00304Q8N9R0 145 aa13.14□□□□□ -0.31
PTX3-201ENST00000295927 SPINK1P00995 79 aa13.13□□□□□ -0.31
PTX3-201ENST00000295927 HCG22E2RYF7 251 aa13.13□□□□□ -0.31
PTX3-201ENST00000295927 LIMD2Q9BT23 127 aa13.13□□□□□ -0.31
PTX3-201ENST00000295927 Q8N1X5 172 aa13.09□□□□□ -0.31
PTX3-201ENST00000295927 SPAG11AQ6PDA7 123 aa13.09□□□□□ -0.31
PTX3-201ENST00000295927 C1orf195Q5TG92 126 aa13.08□□□□□ -0.32
PTX3-201ENST00000295927 SERP2Q8N6R1 65 aa13.08□□□□□ -0.32
PTX3-201ENST00000295927 WFDC13Q8IUB5 93 aa13.07□□□□□ -0.32
PTX3-201ENST00000295927 A0A1B0GVX0 72 aa13.07□□□□□ -0.32
PTX3-201ENST00000295927 IGHV6-1A0A0B4J1U7 121 aa13.05□□□□□ -0.32
PTX3-201ENST00000295927 COX7CP15954 63 aa13.05□□□□□ -0.32
PTX3-201ENST00000295927 SMIM20Q8N5G0 67 aa13.05□□□□□ -0.32
PTX3-201ENST00000295927 MMP24-AS1A0A0U1RRL7 71 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms