RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 SIGMAR1Q99720 223 aa13.94□□□□□ -0.18
PTX3-201ENST00000295927 LINC00846Q9NV44 126 aa13.94□□□□□ -0.18
PTX3-201ENST00000295927 PKHD1P08F94 4074 aa13.93□□□□□ -0.18
PTX3-201ENST00000295927 IGLV7-43P04211 117 aa13.91□□□□□ -0.18
PTX3-201ENST00000295927 MT-ATP8P03928 68 aa13.9□□□□□ -0.18
PTX3-201ENST00000295927 F8WEM9 126 aa13.9□□□□□ -0.18
PTX3-201ENST00000295927 SPRR4Q96PI1 79 aa13.88□□□□□ -0.19
PTX3-201ENST00000295927 LRP1BQ9NZR2 4599 aa13.87□□□□□ -0.19
PTX3-201ENST00000295927 C21orf62-AS1Q17RA5 79 aa13.86□□□□□ -0.19
PTX3-201ENST00000295927 LINC00643Q86TS7 51 aa13.84□□□□□ -0.19
PTX3-201ENST00000295927 ZNF706Q9Y5V0 76 aaPredicted RBP13.84□□□□□ -0.19
PTX3-201ENST00000295927 DYNC1H1Q14204 4646 aaKnown RBP13.83□□□□□ -0.19
PTX3-201ENST00000295927 IGLV8-61A0A075B6I0 122 aa13.83□□□□□ -0.2
PTX3-201ENST00000295927 LINC00483Q53H64 154 aa13.82□□□□□ -0.2
PTX3-201ENST00000295927 A0A1W2PNM2 257 aa13.8□□□□□ -0.2
PTX3-201ENST00000295927 IGFL1Q6UW32 110 aa13.79□□□□□ -0.2
PTX3-201ENST00000295927 UBL5Q9BZL1 73 aa13.78□□□□□ -0.2
PTX3-201ENST00000295927 A0A0G2JQZ4 141 aa13.78□□□□□ -0.2
PTX3-201ENST00000295927 Q8NBF4 154 aa13.77□□□□□ -0.21
PTX3-201ENST00000295927 ANAPC11Q9NYG5 84 aa13.74□□□□□ -0.21
PTX3-201ENST00000295927 Q6ZVQ6 151 aa13.73□□□□□ -0.21
PTX3-201ENST00000295927 RYR3Q15413 4870 aa13.73□□□□□ -0.21
PTX3-201ENST00000295927 Q6JHZ5 121 aa13.72□□□□□ -0.21
PTX3-201ENST00000295927 IGLV9-49A0A0B4J1Y8 123 aa13.72□□□□□ -0.21
PTX3-201ENST00000295927 A0A1B0GW54 56 aa13.71□□□□□ -0.21
PTX3-201ENST00000295927 IGKV3D-7A0A0C4DH55 119 aa13.7□□□□□ -0.22
PTX3-201ENST00000295927 TRBV7-7A0A0K0K1E9 115 aa13.69□□□□□ -0.22
PTX3-201ENST00000295927 CRYGAP11844 174 aa13.68□□□□□ -0.22
PTX3-201ENST00000295927 C9orf153Q5TBE3 101 aa13.68□□□□□ -0.22
PTX3-201ENST00000295927 VPS13BQ7Z7G8 4022 aa13.68□□□□□ -0.22
PTX3-201ENST00000295927 APOBP04114 4563 aaKnown RBP13.67□□□□□ -0.22
PTX3-201ENST00000295927 SMR3BP02814 79 aaPredicted RBP13.65□□□□□ -0.22
PTX3-201ENST00000295927 RPL37AP61513 92 aaKnown RBP13.64□□□□□ -0.23
PTX3-201ENST00000295927 Q6Q795 121 aa13.64□□□□□ -0.23
PTX3-201ENST00000295927 NREPQ16612 68 aa13.64□□□□□ -0.23
PTX3-201ENST00000295927 IMUPQ9GZP8 106 aa13.64□□□□□ -0.23
PTX3-201ENST00000295927 ATP5EP2Q5VTU8 51 aa13.63□□□□□ -0.23
PTX3-201ENST00000295927 MOBPQ13875 183 aa13.62□□□□□ -0.23
PTX3-201ENST00000295927 SCGB1A1P11684 91 aa13.61□□□□□ -0.23
PTX3-201ENST00000295927 A0A087WSZ3 146 aa13.58□□□□□ -0.24
PTX3-201ENST00000295927 CXCL6P80162 114 aa13.56□□□□□ -0.24
PTX3-201ENST00000295927 KRTAP1-4P0C5Y4 121 aa13.52□□□□□ -0.24
PTX3-201ENST00000295927 HIST1H4AP62805 103 aaKnown RBP13.52□□□□□ -0.25
PTX3-201ENST00000295927 SPINK6Q6UWN8 80 aa13.52□□□□□ -0.25
PTX3-201ENST00000295927 A0A087X002 238 aa13.51□□□□□ -0.25
PTX3-201ENST00000295927 PCP4P48539 62 aa13.51□□□□□ -0.25
PTX3-201ENST00000295927 FAM229BQ4G0N7 80 aa13.51□□□□□ -0.25
PTX3-201ENST00000295927 BPY2O14599 106 aa13.5□□□□□ -0.25
PTX3-201ENST00000295927 HRCT1Q6UXD1 115 aa13.5□□□□□ -0.25
PTX3-201ENST00000295927 A0A087WVE0 104 aa13.49□□□□□ -0.25
PTX3-201ENST00000295927 KRTAP10-4P60372 401 aaPredicted RBP13.49□□□□□ -0.25
PTX3-201ENST00000295927 FAT1Q14517 4588 aa13.48□□□□□ -0.25
PTX3-201ENST00000295927 KRTAP13-2Q52LG2 175 aa13.47□□□□□ -0.25
PTX3-201ENST00000295927 SSBP3-AS1Q7Z2R9 100 aa13.47□□□□□ -0.25
PTX3-201ENST00000295927 FAM236AA0A1B0GUQ0 79 aa13.45□□□□□ -0.26
PTX3-201ENST00000295927 FAM236BA0A1B0GV22 79 aa13.45□□□□□ -0.26
PTX3-201ENST00000295927 PLA2G1BP04054 148 aaKnown RBP13.43□□□□□ -0.26
PTX3-201ENST00000295927 DEFB116Q30KQ4 102 aa13.41□□□□□ -0.26
PTX3-201ENST00000295927 Q8N9L7 120 aa13.41□□□□□ -0.26
PTX3-201ENST00000295927 CDK2AP2O75956 126 aa13.41□□□□□ -0.26
PTX3-201ENST00000295927 DSCR10P59022 87 aa13.39□□□□□ -0.27
PTX3-201ENST00000295927 LINC00472Q9H8W2 130 aa13.38□□□□□ -0.27
PTX3-201ENST00000295927 IGKV4-1P06312 121 aa13.37□□□□□ -0.27
PTX3-201ENST00000295927 CD164Q04900 197 aa13.37□□□□□ -0.27
PTX3-201ENST00000295927 SS18L2Q9UHA2 77 aa13.36□□□□□ -0.27
PTX3-201ENST00000295927 FAM229AH3BQW9 127 aa13.35□□□□□ -0.27
PTX3-201ENST00000295927 HSPG2P98160 4391 aa13.33□□□□□ -0.27
PTX3-201ENST00000295927 Q96NJ1 140 aa13.31□□□□□ -0.28
PTX3-201ENST00000295927 K7EQZ3 153 aa13.31□□□□□ -0.28
PTX3-201ENST00000295927 TYMSOSQ8TAI1 123 aa13.31□□□□□ -0.28
PTX3-201ENST00000295927 ANAPC13Q9BS18 74 aa13.31□□□□□ -0.28
PTX3-201ENST00000295927 PRR26Q8N8Z3 221 aa13.29□□□□□ -0.28
PTX3-201ENST00000295927 Q5VSD8 79 aa13.27□□□□□ -0.29
PTX3-201ENST00000295927 RYR1P21817 5038 aa13.27□□□□□ -0.29
PTX3-201ENST00000295927 J3KT08 172 aa13.25□□□□□ -0.29
PTX3-201ENST00000295927 PKHD1L1Q86WI1 4243 aa13.25□□□□□ -0.29
PTX3-201ENST00000295927 ATOX1O00244 68 aa13.25□□□□□ -0.29
PTX3-201ENST00000295927 EPPK1P58107 5090 aaKnown RBP13.24□□□□□ -0.29
PTX3-201ENST00000295927 A8MWP4 228 aa13.22□□□□□ -0.29
PTX3-201ENST00000295927 C4orf48Q5BLP8 95 aa13.19□□□□□ -0.3
PTX3-201ENST00000295927 PRR15Q8IV56 129 aa13.19□□□□□ -0.3
PTX3-201ENST00000295927 KRTAP17-1Q9BYP8 105 aa13.19□□□□□ -0.3
PTX3-201ENST00000295927 ASB16-AS1Q495Z4 193 aa13.18□□□□□ -0.3
PTX3-201ENST00000295927 Q5XG85 94 aa13.17□□□□□ -0.3
PTX3-201ENST00000295927 KIAA1109Q2LD37 5005 aa13.16□□□□□ -0.3
PTX3-201ENST00000295927 NDUFB1O75438 58 aa13.14□□□□□ -0.31
PTX3-201ENST00000295927 LINC00304Q8N9R0 145 aa13.14□□□□□ -0.31
PTX3-201ENST00000295927 SPINK1P00995 79 aa13.13□□□□□ -0.31
PTX3-201ENST00000295927 HCG22E2RYF7 251 aa13.13□□□□□ -0.31
PTX3-201ENST00000295927 LIMD2Q9BT23 127 aa13.13□□□□□ -0.31
PTX3-201ENST00000295927 Q8N1X5 172 aa13.09□□□□□ -0.31
PTX3-201ENST00000295927 SPAG11AQ6PDA7 123 aa13.09□□□□□ -0.31
PTX3-201ENST00000295927 C1orf195Q5TG92 126 aa13.08□□□□□ -0.32
PTX3-201ENST00000295927 SERP2Q8N6R1 65 aa13.08□□□□□ -0.32
PTX3-201ENST00000295927 WFDC13Q8IUB5 93 aa13.07□□□□□ -0.32
PTX3-201ENST00000295927 A0A1B0GVX0 72 aa13.07□□□□□ -0.32
PTX3-201ENST00000295927 IGHV6-1A0A0B4J1U7 121 aa13.05□□□□□ -0.32
PTX3-201ENST00000295927 COX7CP15954 63 aa13.05□□□□□ -0.32
PTX3-201ENST00000295927 SMIM20Q8N5G0 67 aa13.05□□□□□ -0.32
PTX3-201ENST00000295927 MMP24-AS1A0A0U1RRL7 71 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms