RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 SEC61GP60059 68 aa8.73□□□□□ -1.01
NXF1-201ENST00000294172 Q8N9L7 120 aa8.73□□□□□ -1.01
NXF1-201ENST00000294172 A0A0G2JQZ4 141 aa8.72□□□□□ -1.01
NXF1-201ENST00000294172 Q8NBF4 154 aa8.72□□□□□ -1.01
NXF1-201ENST00000294172 LINC00476Q8WZB0 136 aa8.72□□□□□ -1.01
NXF1-201ENST00000294172 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.72□□□□□ -1.01
NXF1-201ENST00000294172 UBE2AP49459 152 aa8.72□□□□□ -1.01
NXF1-201ENST00000294172 BPY2O14599 106 aa8.71□□□□□ -1.01
NXF1-201ENST00000294172 J3KT08 172 aa8.71□□□□□ -1.02
NXF1-201ENST00000294172 HECTD4Q9Y4D8 3996 aa8.71□□□□□ -1.02
NXF1-201ENST00000294172 Q6ZR54 194 aa8.7□□□□□ -1.02
NXF1-201ENST00000294172 SPACA4Q8TDM5 124 aa8.7□□□□□ -1.02
NXF1-201ENST00000294172 RTL8CO15255 209 aa8.69□□□□□ -1.02
NXF1-201ENST00000294172 A0A1B0GW54 56 aa8.68□□□□□ -1.02
NXF1-201ENST00000294172 H0Y9J4 135 aa8.68□□□□□ -1.02
NXF1-201ENST00000294172 LY6G6CO95867 125 aa8.68□□□□□ -1.02
NXF1-201ENST00000294172 IGFL1Q6UW32 110 aa8.68□□□□□ -1.02
NXF1-201ENST00000294172 SPRR4Q96PI1 79 aa8.68□□□□□ -1.02
NXF1-201ENST00000294172 RPS28P62857 69 aaKnown RBP8.66□□□□□ -1.02
NXF1-201ENST00000294172 IGKV4-1P06312 121 aa8.66□□□□□ -1.02
NXF1-201ENST00000294172 C1orf134Q5TEV5 83 aa8.66□□□□□ -1.02
NXF1-201ENST00000294172 SNURFQ9Y675 71 aa8.65□□□□□ -1.02
NXF1-201ENST00000294172 DNAH17Q9UFH2 4485 aa8.65□□□□□ -1.02
NXF1-201ENST00000294172 IGLV5-52A0A0A0MRZ9 124 aa8.63□□□□□ -1.03
NXF1-201ENST00000294172 IGLV8-61A0A075B6I0 122 aa8.62□□□□□ -1.03
NXF1-201ENST00000294172 KLKP1Q107X0 134 aa8.62□□□□□ -1.03
NXF1-201ENST00000294172 H7BZZ5 65 aa8.61□□□□□ -1.03
NXF1-201ENST00000294172 SPRR1BP22528 89 aa8.61□□□□□ -1.03
NXF1-201ENST00000294172 KRTAP13-1Q8IUC0 172 aa8.61□□□□□ -1.03
NXF1-201ENST00000294172 A0A087WSZ3 146 aa8.6□□□□□ -1.03
NXF1-201ENST00000294172 FAM236DA0A1B0GTK5 79 aa8.59□□□□□ -1.03
NXF1-201ENST00000294172 FAM236CP0DP71 79 aa8.59□□□□□ -1.03
NXF1-201ENST00000294172 OXTP01178 125 aa8.59□□□□□ -1.03
NXF1-201ENST00000294172 DEFB116Q30KQ4 102 aa8.58□□□□□ -1.04
NXF1-201ENST00000294172 DNAH8Q96JB1 4490 aa8.58□□□□□ -1.04
NXF1-201ENST00000294172 DSCR10P59022 87 aa8.57□□□□□ -1.04
NXF1-201ENST00000294172 PSORS1C2Q9UIG4 136 aa8.57□□□□□ -1.04
NXF1-201ENST00000294172 K7EQZ3 153 aa8.56□□□□□ -1.04
NXF1-201ENST00000294172 PLAC8Q9NZF1 115 aa8.56□□□□□ -1.04
NXF1-201ENST00000294172 FRAS1Q86XX4 4008 aa8.55□□□□□ -1.04
NXF1-201ENST00000294172 TMEM254Q8TBM7 123 aa8.54□□□□□ -1.04
NXF1-201ENST00000294172 WWC2-AS2Q96NR7 200 aa8.54□□□□□ -1.04
NXF1-201ENST00000294172 OCR1Q9BZK8 76 aa8.54□□□□□ -1.04
NXF1-201ENST00000294172 IGLV9-49A0A0B4J1Y8 123 aa8.54□□□□□ -1.04
NXF1-201ENST00000294172 DNAH6Q9C0G6 4158 aa8.53□□□□□ -1.04
NXF1-201ENST00000294172 NDUFC1O43677 76 aa8.52□□□□□ -1.05
NXF1-201ENST00000294172 FAM30AQ9NZY2 134 aa8.51□□□□□ -1.05
NXF1-201ENST00000294172 DNAH5Q8TE73 4624 aa8.51□□□□□ -1.05
NXF1-201ENST00000294172 KRTAP10-2P60368 255 aa8.49□□□□□ -1.05
NXF1-201ENST00000294172 DNAH11Q96DT5 4516 aa8.49□□□□□ -1.05
NXF1-201ENST00000294172 RPL37AP61513 92 aaKnown RBP8.49□□□□□ -1.05
NXF1-201ENST00000294172 SERP1Q9Y6X1 66 aa8.49□□□□□ -1.05
NXF1-201ENST00000294172 HYDINQ4G0P3 5121 aa8.49□□□□□ -1.05
NXF1-201ENST00000294172 ZNF861PO60384 105 aa8.48□□□□□ -1.05
NXF1-201ENST00000294172 KRTAP21-3Q3LHN1 58 aa8.48□□□□□ -1.05
NXF1-201ENST00000294172 ANAPC11Q9NYG5 84 aa8.48□□□□□ -1.05
NXF1-201ENST00000294172 ZNF706Q9Y5V0 76 aaPredicted RBP8.48□□□□□ -1.05
NXF1-201ENST00000294172 A0A0U1RQV1 116 aa8.47□□□□□ -1.05
NXF1-201ENST00000294172 LINC00483Q53H64 154 aa8.47□□□□□ -1.05
NXF1-201ENST00000294172 HCG22E2RYF7 251 aa8.46□□□□□ -1.06
NXF1-201ENST00000294172 HRCT1Q6UXD1 115 aa8.46□□□□□ -1.06
NXF1-201ENST00000294172 ALMS1Q8TCU4 4167 aa8.45□□□□□ -1.06
NXF1-201ENST00000294172 MOBPQ13875 183 aa8.43□□□□□ -1.06
NXF1-201ENST00000294172 WFDC13Q8IUB5 93 aa8.43□□□□□ -1.06
NXF1-201ENST00000294172 CIRBP-AS1Q8TBR5 109 aa8.43□□□□□ -1.06
NXF1-201ENST00000294172 LINC00472Q9H8W2 130 aa8.43□□□□□ -1.06
NXF1-201ENST00000294172 C4orf26Q17RF5 130 aa8.43□□□□□ -1.06
NXF1-201ENST00000294172 Q5XG85 94 aa8.43□□□□□ -1.06
NXF1-201ENST00000294172 IGLV7-43P04211 117 aa8.42□□□□□ -1.06
NXF1-201ENST00000294172 C4orf48Q5BLP8 95 aa8.42□□□□□ -1.06
NXF1-201ENST00000294172 V9GYY9 64 aa8.42□□□□□ -1.06
NXF1-201ENST00000294172 FAT2Q9NYQ8 4349 aa8.42□□□□□ -1.06
NXF1-201ENST00000294172 ATP5EP56381 51 aaPredicted RBP8.41□□□□□ -1.06
NXF1-201ENST00000294172 PKD1P98161 4303 aa8.39□□□□□ -1.07
NXF1-201ENST00000294172 A8MWP4 228 aa8.39□□□□□ -1.07
NXF1-201ENST00000294172 PRR15Q8IV56 129 aa8.39□□□□□ -1.07
NXF1-201ENST00000294172 LCE6AA0A183 80 aa8.37□□□□□ -1.07
NXF1-201ENST00000294172 KRTAP10-1P60331 282 aa8.37□□□□□ -1.07
NXF1-201ENST00000294172 LRP1BQ9NZR2 4599 aa8.36□□□□□ -1.07
NXF1-201ENST00000294172 CASC2Q6XLA1 102 aa8.35□□□□□ -1.07
NXF1-201ENST00000294172 SMIM26A0A096LP01 95 aa8.34□□□□□ -1.07
NXF1-201ENST00000294172 Q96NJ1 140 aa8.34□□□□□ -1.08
NXF1-201ENST00000294172 KRTAP29-1A8MX34 341 aaPredicted RBP8.33□□□□□ -1.08
NXF1-201ENST00000294172 NDUFB1O75438 58 aa8.33□□□□□ -1.08
NXF1-201ENST00000294172 Q6ZSA8 131 aa8.32□□□□□ -1.08
NXF1-201ENST00000294172 FP248Q71RG6 208 aaPredicted RBP8.31□□□□□ -1.08
NXF1-201ENST00000294172 ZCCHC13Q8WW36 166 aaKnown RBP8.31□□□□□ -1.08
NXF1-201ENST00000294172 SACSQ9NZJ4 4579 aa8.3□□□□□ -1.08
NXF1-201ENST00000294172 FAM229BQ4G0N7 80 aa8.29□□□□□ -1.08
NXF1-201ENST00000294172 MMP24-AS1A0A0U1RRL7 71 aa8.28□□□□□ -1.08
NXF1-201ENST00000294172 CDK2AP2O75956 126 aa8.26□□□□□ -1.09
NXF1-201ENST00000294172 IGHV6-1A0A0B4J1U7 121 aa8.26□□□□□ -1.09
NXF1-201ENST00000294172 hDV103S1A0JD37 113 aa8.26□□□□□ -1.09
NXF1-201ENST00000294172 MP68P56378 58 aa8.26□□□□□ -1.09
NXF1-201ENST00000294172 PKHD1P08F94 4074 aa8.25□□□□□ -1.09
NXF1-201ENST00000294172 PRO0628Q9UI54 55 aa8.25□□□□□ -1.09
NXF1-201ENST00000294172 VPS13BQ7Z7G8 4022 aa8.24□□□□□ -1.09
NXF1-201ENST00000294172 SPINK6Q6UWN8 80 aa8.24□□□□□ -1.09
NXF1-201ENST00000294172 LINC00336Q6ZUF6 198 aa8.24□□□□□ -1.09
NXF1-201ENST00000294172 LINC00208Q96KT6 92 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms