RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 PRKDCP78527 4128 aaKnown RBP9.92□□□□□ -0.82
NCKIPSD-201ENST00000294129 PANO1I0J062 215 aa9.91□□□□□ -0.82
NCKIPSD-201ENST00000294129 TMEM254Q8TBM7 123 aa9.9□□□□□ -0.82
NCKIPSD-201ENST00000294129 TGP01266 2768 aa9.9□□□□□ -0.82
NCKIPSD-201ENST00000294129 EPM2AB3EWF7 344 aa9.9□□□□□ -0.83
NCKIPSD-201ENST00000294129 STARD9Q9P2P6 4700 aa9.89□□□□□ -0.83
NCKIPSD-201ENST00000294129 LRCOL1A6NCL2 159 aa9.89□□□□□ -0.83
NCKIPSD-201ENST00000294129 UBE2AP49459 152 aa9.89□□□□□ -0.83
NCKIPSD-201ENST00000294129 IGFL1Q6UW32 110 aa9.89□□□□□ -0.83
NCKIPSD-201ENST00000294129 NUPR2A6NF83 97 aa9.88□□□□□ -0.83
NCKIPSD-201ENST00000294129 C9orf163Q8N9P6 203 aa9.88□□□□□ -0.83
NCKIPSD-201ENST00000294129 NDUFC1O43677 76 aa9.86□□□□□ -0.83
NCKIPSD-201ENST00000294129 A0A087WSZ3 146 aa9.85□□□□□ -0.83
NCKIPSD-201ENST00000294129 SPRR4Q96PI1 79 aa9.85□□□□□ -0.83
NCKIPSD-201ENST00000294129 FAM30AQ9NZY2 134 aa9.85□□□□□ -0.83
NCKIPSD-201ENST00000294129 K7EQZ3 153 aa9.85□□□□□ -0.83
NCKIPSD-201ENST00000294129 FP248Q71RG6 208 aaPredicted RBP9.85□□□□□ -0.83
NCKIPSD-201ENST00000294129 LINC00474Q9P2X8 69 aa9.85□□□□□ -0.83
NCKIPSD-201ENST00000294129 DYNC2H1Q8NCM8 4307 aaKnown RBP9.84□□□□□ -0.83
NCKIPSD-201ENST00000294129 OCR1Q9BZK8 76 aa9.84□□□□□ -0.83
NCKIPSD-201ENST00000294129 MEGF8Q7Z7M0 2845 aa9.83□□□□□ -0.84
NCKIPSD-201ENST00000294129 DSCR10P59022 87 aa9.83□□□□□ -0.84
NCKIPSD-201ENST00000294129 Q6ZRN7 208 aaPredicted RBP9.83□□□□□ -0.84
NCKIPSD-201ENST00000294129 SMIM26A0A096LP01 95 aa9.82□□□□□ -0.84
NCKIPSD-201ENST00000294129 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.81□□□□□ -0.84
NCKIPSD-201ENST00000294129 LINC00336Q6ZUF6 198 aa9.81□□□□□ -0.84
NCKIPSD-201ENST00000294129 KMT2AQ03164 3969 aa9.81□□□□□ -0.84
NCKIPSD-201ENST00000294129 A0A0U1RQV1 116 aa9.78□□□□□ -0.84
NCKIPSD-201ENST00000294129 A0A1B0GW54 56 aa9.78□□□□□ -0.84
NCKIPSD-201ENST00000294129 RPL37AP61513 92 aaKnown RBP9.78□□□□□ -0.84
NCKIPSD-201ENST00000294129 FAM229BQ4G0N7 80 aa9.77□□□□□ -0.85
NCKIPSD-201ENST00000294129 WFDC13Q8IUB5 93 aa9.76□□□□□ -0.85
NCKIPSD-201ENST00000294129 ATP5EP56381 51 aaPredicted RBP9.75□□□□□ -0.85
NCKIPSD-201ENST00000294129 DNHD1Q96M86 4753 aa9.75□□□□□ -0.85
NCKIPSD-201ENST00000294129 A0A087WTM6 91 aa9.75□□□□□ -0.85
NCKIPSD-201ENST00000294129 MPLKIPQ8TAP9 179 aa9.74□□□□□ -0.85
NCKIPSD-201ENST00000294129 IGLV9-49A0A0B4J1Y8 123 aa9.73□□□□□ -0.85
NCKIPSD-201ENST00000294129 VPS13DQ5THJ4 4388 aa9.73□□□□□ -0.85
NCKIPSD-201ENST00000294129 SPACA4Q8TDM5 124 aa9.72□□□□□ -0.85
NCKIPSD-201ENST00000294129 IGLV8-61A0A075B6I0 122 aa9.71□□□□□ -0.86
NCKIPSD-201ENST00000294129 HCG22E2RYF7 251 aa9.7□□□□□ -0.86
NCKIPSD-201ENST00000294129 RTL8CO15255 209 aa9.7□□□□□ -0.86
NCKIPSD-201ENST00000294129 H0Y9J4 135 aa9.7□□□□□ -0.86
NCKIPSD-201ENST00000294129 PKIGQ9Y2B9 76 aa9.69□□□□□ -0.86
NCKIPSD-201ENST00000294129 FRAS1Q86XX4 4008 aa9.69□□□□□ -0.86
NCKIPSD-201ENST00000294129 HECTD4Q9Y4D8 3996 aa9.69□□□□□ -0.86
NCKIPSD-201ENST00000294129 PRO0628Q9UI54 55 aa9.68□□□□□ -0.86
NCKIPSD-201ENST00000294129 ANAPC11Q9NYG5 84 aa9.67□□□□□ -0.86
NCKIPSD-201ENST00000294129 LY6G6CO95867 125 aa9.66□□□□□ -0.86
NCKIPSD-201ENST00000294129 SPRR1BP22528 89 aa9.66□□□□□ -0.86
NCKIPSD-201ENST00000294129 DNAH2Q9P225 4427 aa9.66□□□□□ -0.86
NCKIPSD-201ENST00000294129 KRTAP13-1Q8IUC0 172 aa9.65□□□□□ -0.86
NCKIPSD-201ENST00000294129 BRK1Q8WUW1 75 aa9.64□□□□□ -0.87
NCKIPSD-201ENST00000294129 PSORS1C2Q9UIG4 136 aa9.64□□□□□ -0.87
NCKIPSD-201ENST00000294129 IGLV5-52A0A0A0MRZ9 124 aa9.63□□□□□ -0.87
NCKIPSD-201ENST00000294129 FBN3Q75N90 2809 aa9.62□□□□□ -0.87
NCKIPSD-201ENST00000294129 PRR4Q16378 134 aa9.6□□□□□ -0.87
NCKIPSD-201ENST00000294129 Q6ZR54 194 aa9.6□□□□□ -0.87
NCKIPSD-201ENST00000294129 C1orf134Q5TEV5 83 aa9.6□□□□□ -0.87
NCKIPSD-201ENST00000294129 LCE6AA0A183 80 aa9.6□□□□□ -0.87
NCKIPSD-201ENST00000294129 MOBPQ13875 183 aa9.58□□□□□ -0.88
NCKIPSD-201ENST00000294129 CASC2Q6XLA1 102 aa9.58□□□□□ -0.88
NCKIPSD-201ENST00000294129 LINC00472Q9H8W2 130 aa9.58□□□□□ -0.88
NCKIPSD-201ENST00000294129 PRR15Q8IV56 129 aa9.57□□□□□ -0.88
NCKIPSD-201ENST00000294129 C1orf64Q8NEQ6 169 aa9.57□□□□□ -0.88
NCKIPSD-201ENST00000294129 hDV103S1A0JD37 113 aa9.56□□□□□ -0.88
NCKIPSD-201ENST00000294129 ZCCHC13Q8WW36 166 aaKnown RBP9.56□□□□□ -0.88
NCKIPSD-201ENST00000294129 A8MWP4 228 aa9.56□□□□□ -0.88
NCKIPSD-201ENST00000294129 DNAH6Q9C0G6 4158 aa9.54□□□□□ -0.88
NCKIPSD-201ENST00000294129 DNAH8Q96JB1 4490 aa9.54□□□□□ -0.88
NCKIPSD-201ENST00000294129 DNAH17Q9UFH2 4485 aa9.53□□□□□ -0.88
NCKIPSD-201ENST00000294129 LINC00208Q96KT6 92 aa9.53□□□□□ -0.88
NCKIPSD-201ENST00000294129 PLAC8Q9NZF1 115 aa9.52□□□□□ -0.88
NCKIPSD-201ENST00000294129 KRTAP29-1A8MX34 341 aaPredicted RBP9.51□□□□□ -0.89
NCKIPSD-201ENST00000294129 ZNF861PO60384 105 aa9.51□□□□□ -0.89
NCKIPSD-201ENST00000294129 MP68P56378 58 aa9.5□□□□□ -0.89
NCKIPSD-201ENST00000294129 WWC2-AS2Q96NR7 200 aa9.5□□□□□ -0.89
NCKIPSD-201ENST00000294129 ZNF706Q9Y5V0 76 aaPredicted RBP9.49□□□□□ -0.89
NCKIPSD-201ENST00000294129 NDUFB1O75438 58 aa9.49□□□□□ -0.89
NCKIPSD-201ENST00000294129 H0Y9P7 68 aa9.48□□□□□ -0.89
NCKIPSD-201ENST00000294129 KRTAP10-2P60368 255 aa9.48□□□□□ -0.89
NCKIPSD-201ENST00000294129 LINC00483Q53H64 154 aa9.48□□□□□ -0.89
NCKIPSD-201ENST00000294129 IGHV6-1A0A0B4J1U7 121 aa9.46□□□□□ -0.89
NCKIPSD-201ENST00000294129 Q96NJ1 140 aa9.46□□□□□ -0.9
NCKIPSD-201ENST00000294129 MMP24-AS1A0A0U1RRL7 71 aa9.45□□□□□ -0.9
NCKIPSD-201ENST00000294129 PSPHP1O15172 72 aa9.45□□□□□ -0.9
NCKIPSD-201ENST00000294129 SPINK6Q6UWN8 80 aa9.45□□□□□ -0.9
NCKIPSD-201ENST00000294129 CIRBP-AS1Q8TBR5 109 aa9.44□□□□□ -0.9
NCKIPSD-201ENST00000294129 DNAH11Q96DT5 4516 aa9.43□□□□□ -0.9
NCKIPSD-201ENST00000294129 NDUFS5O43920 106 aa9.43□□□□□ -0.9
NCKIPSD-201ENST00000294129 IGLV7-43P04211 117 aa9.43□□□□□ -0.9
NCKIPSD-201ENST00000294129 CDK2AP2O75956 126 aa9.42□□□□□ -0.9
NCKIPSD-201ENST00000294129 Q1T7F1 81 aa9.42□□□□□ -0.9
NCKIPSD-201ENST00000294129 TRAV22A0A0B4J277 110 aa9.41□□□□□ -0.9
NCKIPSD-201ENST00000294129 CYP4F30PQ9H0H9 118 aa9.41□□□□□ -0.9
NCKIPSD-201ENST00000294129 DNAH5Q8TE73 4624 aa9.39□□□□□ -0.91
NCKIPSD-201ENST00000294129 HYDINQ4G0P3 5121 aa9.38□□□□□ -0.91
NCKIPSD-201ENST00000294129 C8orf17Q9NRJ1 99 aa9.38□□□□□ -0.91
NCKIPSD-201ENST00000294129 A0A087X002 238 aa9.37□□□□□ -0.91
NCKIPSD-201ENST00000294129 C1orf195Q5TG92 126 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms