RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 GVQW2A0A096LPI5 108 aaPredicted RBP10.1□□□□□ -0.79
CTDSP1-201ENST00000273062 Q8NBF4 154 aa10.1□□□□□ -0.79
CTDSP1-201ENST00000273062 SPART-AS1P0CW21 52 aa10.1□□□□□ -0.79
CTDSP1-201ENST00000273062 Q9BRP9 147 aa10.1□□□□□ -0.79
CTDSP1-201ENST00000273062 NOTCH1P46531 2555 aa10.08□□□□□ -0.8
CTDSP1-201ENST00000273062 TNP2Q05952 138 aa10.07□□□□□ -0.8
CTDSP1-201ENST00000273062 COA5Q86WW8 74 aa10.07□□□□□ -0.8
CTDSP1-201ENST00000273062 C7orf33Q8WU49 177 aa10.07□□□□□ -0.8
CTDSP1-201ENST00000273062 SPANXA2-OT1Q8N9U9 137 aa10.06□□□□□ -0.8
CTDSP1-201ENST00000273062 SPINK7P58062 85 aa10.05□□□□□ -0.8
CTDSP1-201ENST00000273062 SPRR4Q96PI1 79 aa10.05□□□□□ -0.8
CTDSP1-201ENST00000273062 H0Y9P7 68 aa10.04□□□□□ -0.8
CTDSP1-201ENST00000273062 COL6A5A8TX70 2615 aa10.04□□□□□ -0.8
CTDSP1-201ENST00000273062 IGKV2D-24A0A075B6R9 120 aa10.03□□□□□ -0.8
CTDSP1-201ENST00000273062 SPAG11AQ6PDA7 123 aa10.03□□□□□ -0.8
CTDSP1-201ENST00000273062 ADM2Q7Z4H4 148 aa10.03□□□□□ -0.8
CTDSP1-201ENST00000273062 RPL37AP61513 92 aaKnown RBP10.03□□□□□ -0.8
CTDSP1-201ENST00000273062 LINC00313P59037 77 aa10.03□□□□□ -0.8
CTDSP1-201ENST00000273062 CAMK2N2Q96S95 79 aa10.03□□□□□ -0.8
CTDSP1-201ENST00000273062 C9orf163Q8N9P6 203 aa10.01□□□□□ -0.81
CTDSP1-201ENST00000273062 LELP1Q5T871 98 aa10□□□□□ -0.81
CTDSP1-201ENST00000273062 NKAPP1Q8N9T2 125 aa10□□□□□ -0.81
CTDSP1-201ENST00000273062 CSMD3Q7Z407 3707 aa9.99□□□□□ -0.81
CTDSP1-201ENST00000273062 A0A1B0GW54 56 aa9.99□□□□□ -0.81
CTDSP1-201ENST00000273062 EGFEM1PQ0D2K5 195 aa9.99□□□□□ -0.81
CTDSP1-201ENST00000273062 SERTAD4-AS1Q5TG53 156 aa9.99□□□□□ -0.81
CTDSP1-201ENST00000273062 DNAH3Q8TD57 4116 aa9.98□□□□□ -0.81
CTDSP1-201ENST00000273062 PRR34Q9NV39 138 aa9.98□□□□□ -0.81
CTDSP1-201ENST00000273062 BAHCC1Q9P281 2608 aa9.97□□□□□ -0.81
CTDSP1-201ENST00000273062 RPL37AP8A6NKH3 93 aa9.97□□□□□ -0.81
CTDSP1-201ENST00000273062 NBEAL1Q6ZS30 2694 aa9.97□□□□□ -0.81
CTDSP1-201ENST00000273062 KRTAP29-1A8MX34 341 aaPredicted RBP9.97□□□□□ -0.81
CTDSP1-201ENST00000273062 MDFIQ99750 246 aa9.96□□□□□ -0.82
CTDSP1-201ENST00000273062 PLAC8Q9NZF1 115 aa9.95□□□□□ -0.82
CTDSP1-201ENST00000273062 Q6ZRX8 168 aa9.94□□□□□ -0.82
CTDSP1-201ENST00000273062 LINC01558Q9Y6Z2 57 aa9.93□□□□□ -0.82
CTDSP1-201ENST00000273062 PCOTHQ58A44 107 aa9.92□□□□□ -0.82
CTDSP1-201ENST00000273062 LINC00476Q8WZB0 136 aa9.91□□□□□ -0.82
CTDSP1-201ENST00000273062 A0A087WSZ3 146 aa9.9□□□□□ -0.82
CTDSP1-201ENST00000273062 C15orf56Q8N910 161 aa9.9□□□□□ -0.82
CTDSP1-201ENST00000273062 CASC2Q6XLA1 102 aa9.89□□□□□ -0.83
CTDSP1-201ENST00000273062 IGLV7-46A0A075B6I9 117 aa9.89□□□□□ -0.83
CTDSP1-201ENST00000273062 KRTAP4-16G5E9R7 235 aaPredicted RBP9.89□□□□□ -0.83
CTDSP1-201ENST00000273062 IGLV1-50A0A075B6I6 118 aa9.88□□□□□ -0.83
CTDSP1-201ENST00000273062 LINC01554Q52M75 96 aa9.88□□□□□ -0.83
CTDSP1-201ENST00000273062 DHRS4-AS1Q9P1J3 65 aa9.88□□□□□ -0.83
CTDSP1-201ENST00000273062 FAM168BA1KXE4 195 aa9.88□□□□□ -0.83
CTDSP1-201ENST00000273062 CNBPP62633 177 aaKnown RBP9.87□□□□□ -0.83
CTDSP1-201ENST00000273062 IGFL1Q6UW32 110 aa9.87□□□□□ -0.83
CTDSP1-201ENST00000273062 MGAM2Q2M2H8 2515 aa9.87□□□□□ -0.83
CTDSP1-201ENST00000273062 DEFB131BA0A096LNP1 70 aa9.86□□□□□ -0.83
CTDSP1-201ENST00000273062 H3BPC8 53 aa9.86□□□□□ -0.83
CTDSP1-201ENST00000273062 SRRM2Q9UQ35 2752 aaKnown RBP9.85□□□□□ -0.83
CTDSP1-201ENST00000273062 KRTAP26-1Q6PEX3 210 aa9.85□□□□□ -0.83
CTDSP1-201ENST00000273062 H3BNG1 76 aa9.84□□□□□ -0.83
CTDSP1-201ENST00000273062 PRR26Q8N8Z3 221 aa9.84□□□□□ -0.83
CTDSP1-201ENST00000273062 HUWE1Q7Z6Z7 4374 aaKnown RBP9.83□□□□□ -0.84
CTDSP1-201ENST00000273062 IGLV5-37A0A075B6J1 123 aa9.82□□□□□ -0.84
CTDSP1-201ENST00000273062 K7EIL1 84 aa9.8□□□□□ -0.84
CTDSP1-201ENST00000273062 HRES1P13985 223 aa9.78□□□□□ -0.84
CTDSP1-201ENST00000273062 KRTAP7-1Q8IUC3 87 aa9.78□□□□□ -0.84
CTDSP1-201ENST00000273062 LYSTQ99698 3801 aa9.78□□□□□ -0.84
CTDSP1-201ENST00000273062 SPRR1AP35321 89 aa9.78□□□□□ -0.84
CTDSP1-201ENST00000273062 PLA2G1BP04054 148 aaKnown RBP9.74□□□□□ -0.85
CTDSP1-201ENST00000273062 LINC01556Q5JQF7 62 aa9.74□□□□□ -0.85
CTDSP1-201ENST00000273062 STAB2Q8WWQ8 2551 aa9.73□□□□□ -0.85
CTDSP1-201ENST00000273062 COL7A1Q02388 2944 aa9.73□□□□□ -0.85
CTDSP1-201ENST00000273062 TENM2Q9NT68 2774 aa9.73□□□□□ -0.85
CTDSP1-201ENST00000273062 A8MWP4 228 aa9.71□□□□□ -0.85
CTDSP1-201ENST00000273062 CASC10Q5T4H9 136 aa9.71□□□□□ -0.86
CTDSP1-201ENST00000273062 MMP24-AS1A0A0U1RRL7 71 aa9.69□□□□□ -0.86
CTDSP1-201ENST00000273062 DNAH1Q9P2D7 4330 aa9.69□□□□□ -0.86
CTDSP1-201ENST00000273062 DNAH10OSP0CZ25 163 aa9.69□□□□□ -0.86
CTDSP1-201ENST00000273062 H0Y9J4 135 aa9.68□□□□□ -0.86
CTDSP1-201ENST00000273062 LINC00472Q9H8W2 130 aa9.67□□□□□ -0.86
CTDSP1-201ENST00000273062 PRLHP81277 87 aa9.66□□□□□ -0.86
CTDSP1-201ENST00000273062 RTL8CO15255 209 aa9.66□□□□□ -0.86
CTDSP1-201ENST00000273062 IGKV2-24A0A0C4DH68 120 aa9.65□□□□□ -0.87
CTDSP1-201ENST00000273062 DNAH9Q9NYC9 4486 aa9.63□□□□□ -0.87
CTDSP1-201ENST00000273062 DNAH10Q8IVF4 4471 aa9.62□□□□□ -0.87
CTDSP1-201ENST00000273062 CSAG1Q6PB30 78 aa9.61□□□□□ -0.87
CTDSP1-201ENST00000273062 IGLV8-61A0A075B6I0 122 aa9.61□□□□□ -0.87
CTDSP1-201ENST00000273062 REG3GQ6UW15 175 aa9.61□□□□□ -0.87
CTDSP1-201ENST00000273062 PLA2G2DQ9UNK4 145 aa9.6□□□□□ -0.87
CTDSP1-201ENST00000273062 Q6ZR54 194 aa9.6□□□□□ -0.87
CTDSP1-201ENST00000273062 RETNLBQ9BQ08 111 aa9.6□□□□□ -0.87
CTDSP1-201ENST00000273062 DNAH7Q8WXX0 4024 aa9.59□□□□□ -0.87
CTDSP1-201ENST00000273062 A0A096LNI7 61 aa9.58□□□□□ -0.88
CTDSP1-201ENST00000273062 KRTAP1-5Q9BYS1 174 aa9.57□□□□□ -0.88
CTDSP1-201ENST00000273062 TLX1NBP0CAT3 122 aa9.55□□□□□ -0.88
CTDSP1-201ENST00000273062 ALMS1Q8TCU4 4167 aa9.53□□□□□ -0.88
CTDSP1-201ENST00000273062 ASB16-AS1Q495Z4 193 aa9.51□□□□□ -0.89
CTDSP1-201ENST00000273062 PLECQ15149 4684 aaKnown RBP9.5□□□□□ -0.89
CTDSP1-201ENST00000273062 TP53AIP1Q9HCN2 124 aa9.49□□□□□ -0.89
CTDSP1-201ENST00000273062 SPATA8Q6RVD6 105 aa9.48□□□□□ -0.89
CTDSP1-201ENST00000273062 APLNQ9ULZ1 77 aa9.47□□□□□ -0.89
CTDSP1-201ENST00000273062 PRKDCP78527 4128 aaKnown RBP9.47□□□□□ -0.89
CTDSP1-201ENST00000273062 UBE2DNLQ8IWF7 75 aa9.46□□□□□ -0.89
CTDSP1-201ENST00000273062 Q96NJ1 140 aa9.46□□□□□ -0.9
CTDSP1-201ENST00000273062 DYNC2H1Q8NCM8 4307 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 259.2 ms