RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 KRTAP29-1A8MX34 341 aaPredicted RBP15.13■□□□□ 0.01
SSBP4-201ENST00000270061 SMCR5Q8TEV8 140 aa15.13■□□□□ 0.01
SSBP4-201ENST00000270061 C14orf132Q9NPU4 83 aa15.13■□□□□ 0.01
SSBP4-201ENST00000270061 LAMTOR3Q9UHA4 124 aa15.13■□□□□ 0.01
SSBP4-201ENST00000270061 FAT3Q8TDW7 4589 aa15.12■□□□□ 0.01
SSBP4-201ENST00000270061 LINC01547P58512 204 aaPredicted RBP15.11■□□□□ 0.01
SSBP4-201ENST00000270061 IGLV5-48A0A075B6I7 105 aa15.1■□□□□ 0.01
SSBP4-201ENST00000270061 ERC2-IT1O76042 136 aa15.1■□□□□ 0.01
SSBP4-201ENST00000270061 ACYP1P07311 99 aa15.1■□□□□ 0.01
SSBP4-201ENST00000270061 BCE1O60756 84 aa15.09■□□□□ 0.01
SSBP4-201ENST00000270061 RBM3P98179 157 aaKnown RBP15.09■□□□□ 0.01
SSBP4-201ENST00000270061 Q8N377 158 aa15.09■□□□□ 0.01
SSBP4-201ENST00000270061 CDIP1Q9H305 208 aa15.09■□□□□ 0.01
SSBP4-201ENST00000270061 NDUFV3P56181 108 aaKnown RBP15.08■□□□□ 0.01
SSBP4-201ENST00000270061 PRLHP81277 87 aa15.08■□□□□ 0.01
SSBP4-201ENST00000270061 OXTP01178 125 aa15.06■□□□□ 0
SSBP4-201ENST00000270061 ST20-AS1Q8NBB2 130 aa15.05■□□□□ -0
SSBP4-201ENST00000270061 A0A1B0GV72 72 aa15.04■□□□□ -0
SSBP4-201ENST00000270061 DEFB105AQ8NG35 78 aa15.04■□□□□ -0
SSBP4-201ENST00000270061 LOC110117498A0A087WWA1 95 aa15.03■□□□□ -0
SSBP4-201ENST00000270061 CCKP06307 115 aa15.03■□□□□ -0
SSBP4-201ENST00000270061 KRTAP13-1Q8IUC0 172 aa15.03■□□□□ -0
SSBP4-201ENST00000270061 UBE2AP49459 152 aa15.03■□□□□ -0
SSBP4-201ENST00000270061 GAGE2AQ6NT46 116 aa15.03■□□□□ -0
SSBP4-201ENST00000270061 PDE6GP18545 87 aa15.01□□□□□ -0.01
SSBP4-201ENST00000270061 HIGD2AQ9BW72 106 aa15.01□□□□□ -0.01
SSBP4-201ENST00000270061 DSCR8Q96T75 97 aa15.01□□□□□ -0.01
SSBP4-201ENST00000270061 Q6ZQT0 140 aa14.99□□□□□ -0.01
SSBP4-201ENST00000270061 TRBV7-4A0A0J9YYF1 115 aa14.98□□□□□ -0.01
SSBP4-201ENST00000270061 PSORS1C2Q9UIG4 136 aa14.98□□□□□ -0.01
SSBP4-201ENST00000270061 PCP4P48539 62 aa14.96□□□□□ -0.01
SSBP4-201ENST00000270061 C21orf62-AS1Q17RA5 79 aa14.96□□□□□ -0.01
SSBP4-201ENST00000270061 SIGMAR1Q99720 223 aa14.93□□□□□ -0.02
SSBP4-201ENST00000270061 SPRR1BP22528 89 aa14.92□□□□□ -0.02
SSBP4-201ENST00000270061 SMIM29Q86T20 159 aa14.92□□□□□ -0.02
SSBP4-201ENST00000270061 C3orf22Q8N5N4 141 aa14.9□□□□□ -0.02
SSBP4-201ENST00000270061 C1orf137Q5JT78 98 aa14.9□□□□□ -0.02
SSBP4-201ENST00000270061 LINC00846Q9NV44 126 aa14.87□□□□□ -0.03
SSBP4-201ENST00000270061 ZNF861PO60384 105 aa14.86□□□□□ -0.03
SSBP4-201ENST00000270061 SPINK6Q6UWN8 80 aa14.85□□□□□ -0.03
SSBP4-201ENST00000270061 MT-ATP8P03928 68 aa14.83□□□□□ -0.03
SSBP4-201ENST00000270061 LINC00643Q86TS7 51 aa14.83□□□□□ -0.03
SSBP4-201ENST00000270061 IGLV8-61A0A075B6I0 122 aa14.82□□□□□ -0.04
SSBP4-201ENST00000270061 F8WEM9 126 aa14.82□□□□□ -0.04
SSBP4-201ENST00000270061 IGLV7-43P04211 117 aa14.81□□□□□ -0.04
SSBP4-201ENST00000270061 MT1HL1P0DM35 61 aa14.81□□□□□ -0.04
SSBP4-201ENST00000270061 SCGB1A1P11684 91 aa14.8□□□□□ -0.04
SSBP4-201ENST00000270061 TNXBP22105 4242 aa14.79□□□□□ -0.04
SSBP4-201ENST00000270061 SPRR4Q96PI1 79 aa14.79□□□□□ -0.04
SSBP4-201ENST00000270061 ZNF706Q9Y5V0 76 aaPredicted RBP14.78□□□□□ -0.04
SSBP4-201ENST00000270061 LINC00483Q53H64 154 aa14.76□□□□□ -0.05
SSBP4-201ENST00000270061 A0A1B0GW54 56 aa14.75□□□□□ -0.05
SSBP4-201ENST00000270061 UBL5Q9BZL1 73 aa14.73□□□□□ -0.05
SSBP4-201ENST00000270061 A0A1W2PNM2 257 aa14.72□□□□□ -0.05
SSBP4-201ENST00000270061 Q8NBF4 154 aa14.7□□□□□ -0.06
SSBP4-201ENST00000270061 Q6JHZ5 121 aa14.7□□□□□ -0.06
SSBP4-201ENST00000270061 IGFL1Q6UW32 110 aa14.7□□□□□ -0.06
SSBP4-201ENST00000270061 HMCN2Q8NDA2 5059 aa14.69□□□□□ -0.06
SSBP4-201ENST00000270061 TRBV7-7A0A0K0K1E9 115 aa14.69□□□□□ -0.06
SSBP4-201ENST00000270061 Q6Q795 121 aa14.68□□□□□ -0.06
SSBP4-201ENST00000270061 IMUPQ9GZP8 106 aa14.67□□□□□ -0.06
SSBP4-201ENST00000270061 Q6ZVQ6 151 aa14.65□□□□□ -0.06
SSBP4-201ENST00000270061 ATP5EP2Q5VTU8 51 aa14.64□□□□□ -0.07
SSBP4-201ENST00000270061 CRYGAP11844 174 aa14.63□□□□□ -0.07
SSBP4-201ENST00000270061 KRTAP10-8P60410 259 aa14.61□□□□□ -0.07
SSBP4-201ENST00000270061 IGKV3D-7A0A0C4DH55 119 aa14.57□□□□□ -0.08
SSBP4-201ENST00000270061 A0A0G2JQZ4 141 aa14.57□□□□□ -0.08
SSBP4-201ENST00000270061 NREPQ16612 68 aa14.56□□□□□ -0.08
SSBP4-201ENST00000270061 IGLV9-49A0A0B4J1Y8 123 aa14.55□□□□□ -0.08
SSBP4-201ENST00000270061 CXCL6P80162 114 aa14.53□□□□□ -0.08
SSBP4-201ENST00000270061 C9orf153Q5TBE3 101 aa14.53□□□□□ -0.08
SSBP4-201ENST00000270061 ANAPC11Q9NYG5 84 aa14.52□□□□□ -0.08
SSBP4-201ENST00000270061 MOBPQ13875 183 aa14.47□□□□□ -0.09
SSBP4-201ENST00000270061 PRR26Q8N8Z3 221 aa14.47□□□□□ -0.09
SSBP4-201ENST00000270061 KRTAP1-4P0C5Y4 121 aa14.47□□□□□ -0.09
SSBP4-201ENST00000270061 A0A087WSZ3 146 aa14.45□□□□□ -0.1
SSBP4-201ENST00000270061 FAM229BQ4G0N7 80 aa14.45□□□□□ -0.1
SSBP4-201ENST00000270061 BPY2O14599 106 aa14.41□□□□□ -0.1
SSBP4-201ENST00000270061 SSBP3-AS1Q7Z2R9 100 aa14.41□□□□□ -0.1
SSBP4-201ENST00000270061 HIST1H4AP62805 103 aaKnown RBP14.4□□□□□ -0.1
SSBP4-201ENST00000270061 UBR4Q5T4S7 5183 aa14.4□□□□□ -0.1
SSBP4-201ENST00000270061 A0A087WVE0 104 aa14.35□□□□□ -0.11
SSBP4-201ENST00000270061 FAM236AA0A1B0GUQ0 79 aa14.35□□□□□ -0.11
SSBP4-201ENST00000270061 FAM236BA0A1B0GV22 79 aa14.35□□□□□ -0.11
SSBP4-201ENST00000270061 LRP2P98164 4655 aa14.34□□□□□ -0.11
SSBP4-201ENST00000270061 A0A087X002 238 aa14.34□□□□□ -0.11
SSBP4-201ENST00000270061 CD164Q04900 197 aa14.33□□□□□ -0.12
SSBP4-201ENST00000270061 KRTAP13-2Q52LG2 175 aa14.32□□□□□ -0.12
SSBP4-201ENST00000270061 ANAPC13Q9BS18 74 aa14.31□□□□□ -0.12
SSBP4-201ENST00000270061 LINC00472Q9H8W2 130 aa14.29□□□□□ -0.12
SSBP4-201ENST00000270061 HRCT1Q6UXD1 115 aa14.29□□□□□ -0.12
SSBP4-201ENST00000270061 SS18L2Q9UHA2 77 aa14.29□□□□□ -0.12
SSBP4-201ENST00000270061 DSCR10P59022 87 aa14.28□□□□□ -0.12
SSBP4-201ENST00000270061 IGKV4-1P06312 121 aa14.27□□□□□ -0.12
SSBP4-201ENST00000270061 Q8N9L7 120 aa14.24□□□□□ -0.13
SSBP4-201ENST00000270061 DEFB116Q30KQ4 102 aa14.21□□□□□ -0.13
SSBP4-201ENST00000270061 J3KT08 172 aa14.2□□□□□ -0.14
SSBP4-201ENST00000270061 ATOX1O00244 68 aa14.2□□□□□ -0.14
SSBP4-201ENST00000270061 TYMSOSQ8TAI1 123 aa14.19□□□□□ -0.14
SSBP4-201ENST00000270061 Q96NJ1 140 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms