RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 C21orf62-AS1Q17RA5 79 aa9.99□□□□□ -0.81
TPM1-201ENST00000267996 SRRM2Q9UQ35 2752 aaKnown RBP9.97□□□□□ -0.81
TPM1-201ENST00000267996 IGLV7-43P04211 117 aa9.96□□□□□ -0.81
TPM1-201ENST00000267996 XGP55808 180 aa9.96□□□□□ -0.81
TPM1-201ENST00000267996 SIGMAR1Q99720 223 aa9.96□□□□□ -0.82
TPM1-201ENST00000267996 LINC00846Q9NV44 126 aa9.96□□□□□ -0.82
TPM1-201ENST00000267996 HAMPP81172 84 aa9.95□□□□□ -0.82
TPM1-201ENST00000267996 IGLV8-61A0A075B6I0 122 aa9.94□□□□□ -0.82
TPM1-201ENST00000267996 SPRR4Q96PI1 79 aa9.93□□□□□ -0.82
TPM1-201ENST00000267996 LINC00483Q53H64 154 aa9.93□□□□□ -0.82
TPM1-201ENST00000267996 MT-ATP8P03928 68 aa9.92□□□□□ -0.82
TPM1-201ENST00000267996 F8WEM9 126 aa9.91□□□□□ -0.82
TPM1-201ENST00000267996 LINC00643Q86TS7 51 aa9.91□□□□□ -0.82
TPM1-201ENST00000267996 ZNF706Q9Y5V0 76 aaPredicted RBP9.91□□□□□ -0.82
TPM1-201ENST00000267996 APOBP04114 4563 aaKnown RBP9.9□□□□□ -0.83
TPM1-201ENST00000267996 A0A1W2PNM2 257 aa9.88□□□□□ -0.83
TPM1-201ENST00000267996 VPS13BQ7Z7G8 4022 aa9.87□□□□□ -0.83
TPM1-201ENST00000267996 A0A1B0GW54 56 aa9.87□□□□□ -0.83
TPM1-201ENST00000267996 IGFL1Q6UW32 110 aa9.87□□□□□ -0.83
TPM1-201ENST00000267996 Q8NBF4 154 aa9.87□□□□□ -0.83
TPM1-201ENST00000267996 RYR3Q15413 4870 aa9.86□□□□□ -0.83
TPM1-201ENST00000267996 Q6JHZ5 121 aa9.84□□□□□ -0.83
TPM1-201ENST00000267996 UBL5Q9BZL1 73 aa9.84□□□□□ -0.83
TPM1-201ENST00000267996 TRBV7-7A0A0K0K1E9 115 aa9.82□□□□□ -0.84
TPM1-201ENST00000267996 Q6ZVQ6 151 aa9.82□□□□□ -0.84
TPM1-201ENST00000267996 CRYGAP11844 174 aa9.81□□□□□ -0.84
TPM1-201ENST00000267996 A0A0G2JQZ4 141 aa9.8□□□□□ -0.84
TPM1-201ENST00000267996 RPL37AP61513 92 aaKnown RBP9.8□□□□□ -0.84
TPM1-201ENST00000267996 Q6Q795 121 aa9.8□□□□□ -0.84
TPM1-201ENST00000267996 ATP5EP2Q5VTU8 51 aa9.78□□□□□ -0.84
TPM1-201ENST00000267996 IMUPQ9GZP8 106 aa9.78□□□□□ -0.84
TPM1-201ENST00000267996 ANAPC11Q9NYG5 84 aa9.78□□□□□ -0.84
TPM1-201ENST00000267996 IGLV9-49A0A0B4J1Y8 123 aa9.77□□□□□ -0.85
TPM1-201ENST00000267996 IGKV3D-7A0A0C4DH55 119 aa9.76□□□□□ -0.85
TPM1-201ENST00000267996 SCGB1A1P11684 91 aa9.76□□□□□ -0.85
TPM1-201ENST00000267996 FAT1Q14517 4588 aa9.75□□□□□ -0.85
TPM1-201ENST00000267996 C9orf153Q5TBE3 101 aa9.74□□□□□ -0.85
TPM1-201ENST00000267996 NREPQ16612 68 aa9.74□□□□□ -0.85
TPM1-201ENST00000267996 MOBPQ13875 183 aa9.72□□□□□ -0.85
TPM1-201ENST00000267996 SMR3BP02814 79 aaPredicted RBP9.71□□□□□ -0.85
TPM1-201ENST00000267996 CXCL6P80162 114 aa9.71□□□□□ -0.85
TPM1-201ENST00000267996 FAM229BQ4G0N7 80 aa9.71□□□□□ -0.85
TPM1-201ENST00000267996 KRTAP1-4P0C5Y4 121 aa9.7□□□□□ -0.86
TPM1-201ENST00000267996 KRTAP10-4P60372 401 aaPredicted RBP9.7□□□□□ -0.86
TPM1-201ENST00000267996 A0A087WSZ3 146 aa9.69□□□□□ -0.86
TPM1-201ENST00000267996 SPINK6Q6UWN8 80 aa9.69□□□□□ -0.86
TPM1-201ENST00000267996 SSBP3-AS1Q7Z2R9 100 aa9.67□□□□□ -0.86
TPM1-201ENST00000267996 A0A087X002 238 aa9.66□□□□□ -0.86
TPM1-201ENST00000267996 HSPG2P98160 4391 aa9.65□□□□□ -0.86
TPM1-201ENST00000267996 BPY2O14599 106 aa9.64□□□□□ -0.87
TPM1-201ENST00000267996 KRTAP13-2Q52LG2 175 aa9.64□□□□□ -0.87
TPM1-201ENST00000267996 CDK2AP2O75956 126 aa9.63□□□□□ -0.87
TPM1-201ENST00000267996 HIST1H4AP62805 103 aaKnown RBP9.61□□□□□ -0.87
TPM1-201ENST00000267996 CD164Q04900 197 aa9.61□□□□□ -0.87
TPM1-201ENST00000267996 PKHD1L1Q86WI1 4243 aa9.61□□□□□ -0.87
TPM1-201ENST00000267996 A0A087WVE0 104 aa9.61□□□□□ -0.87
TPM1-201ENST00000267996 LINC00472Q9H8W2 130 aa9.6□□□□□ -0.87
TPM1-201ENST00000267996 PLA2G1BP04054 148 aaKnown RBP9.59□□□□□ -0.87
TPM1-201ENST00000267996 HRCT1Q6UXD1 115 aa9.59□□□□□ -0.87
TPM1-201ENST00000267996 FAM236AA0A1B0GUQ0 79 aa9.58□□□□□ -0.88
TPM1-201ENST00000267996 FAM236BA0A1B0GV22 79 aa9.58□□□□□ -0.88
TPM1-201ENST00000267996 DSCR10P59022 87 aa9.58□□□□□ -0.88
TPM1-201ENST00000267996 PCP4P48539 62 aa9.58□□□□□ -0.88
TPM1-201ENST00000267996 RYR1P21817 5038 aa9.57□□□□□ -0.88
TPM1-201ENST00000267996 IGKV4-1P06312 121 aa9.57□□□□□ -0.88
TPM1-201ENST00000267996 SS18L2Q9UHA2 77 aa9.57□□□□□ -0.88
TPM1-201ENST00000267996 Q8N9L7 120 aa9.55□□□□□ -0.88
TPM1-201ENST00000267996 FAM229AH3BQW9 127 aa9.54□□□□□ -0.88
TPM1-201ENST00000267996 Q96NJ1 140 aa9.54□□□□□ -0.88
TPM1-201ENST00000267996 DEFB116Q30KQ4 102 aa9.53□□□□□ -0.88
TPM1-201ENST00000267996 J3KT08 172 aa9.51□□□□□ -0.89
TPM1-201ENST00000267996 TYMSOSQ8TAI1 123 aa9.51□□□□□ -0.89
TPM1-201ENST00000267996 K7EQZ3 153 aa9.5□□□□□ -0.89
TPM1-201ENST00000267996 ASB16-AS1Q495Z4 193 aa9.49□□□□□ -0.89
TPM1-201ENST00000267996 Q5XG85 94 aa9.49□□□□□ -0.89
TPM1-201ENST00000267996 PRR26Q8N8Z3 221 aa9.49□□□□□ -0.89
TPM1-201ENST00000267996 EPPK1P58107 5090 aaKnown RBP9.49□□□□□ -0.89
TPM1-201ENST00000267996 ATOX1O00244 68 aa9.48□□□□□ -0.89
TPM1-201ENST00000267996 Q5VSD8 79 aa9.48□□□□□ -0.89
TPM1-201ENST00000267996 ANAPC13Q9BS18 74 aa9.48□□□□□ -0.89
TPM1-201ENST00000267996 A8MWP4 228 aa9.47□□□□□ -0.89
TPM1-201ENST00000267996 PRR15Q8IV56 129 aa9.45□□□□□ -0.9
TPM1-201ENST00000267996 KIAA1109Q2LD37 5005 aa9.45□□□□□ -0.9
TPM1-201ENST00000267996 KRTAP17-1Q9BYP8 105 aa9.45□□□□□ -0.9
TPM1-201ENST00000267996 SPINK1P00995 79 aa9.42□□□□□ -0.9
TPM1-201ENST00000267996 C4orf48Q5BLP8 95 aa9.42□□□□□ -0.9
TPM1-201ENST00000267996 SPAG11AQ6PDA7 123 aa9.4□□□□□ -0.9
TPM1-201ENST00000267996 LIMD2Q9BT23 127 aa9.4□□□□□ -0.9
TPM1-201ENST00000267996 LINC00304Q8N9R0 145 aa9.39□□□□□ -0.91
TPM1-201ENST00000267996 HCG22E2RYF7 251 aa9.39□□□□□ -0.91
TPM1-201ENST00000267996 NDUFB1O75438 58 aa9.39□□□□□ -0.91
TPM1-201ENST00000267996 RPS29P62273 56 aaKnown RBP9.39□□□□□ -0.91
TPM1-201ENST00000267996 Q8N1X5 172 aa9.39□□□□□ -0.91
TPM1-201ENST00000267996 C1orf195Q5TG92 126 aa9.37□□□□□ -0.91
TPM1-201ENST00000267996 SERP2Q8N6R1 65 aa9.36□□□□□ -0.91
TPM1-201ENST00000267996 A0A1B0GVX0 72 aa9.36□□□□□ -0.91
TPM1-201ENST00000267996 KRTAP29-1A8MX34 341 aaPredicted RBP9.36□□□□□ -0.91
TPM1-201ENST00000267996 SMIM20Q8N5G0 67 aa9.36□□□□□ -0.91
TPM1-201ENST00000267996 TNXBP22105 4242 aa9.34□□□□□ -0.91
TPM1-201ENST00000267996 TRAV7A0A075B6U4 112 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms