RNA–Protein interactions for RNA: ENST00000264596.3

NEIL3-201, Transcript of nei like DNA glycosylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL3, Length 2,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-201ENST00000264596 IGFL1Q6UW32 110 aa12.42□□□□□ -0.42
NEIL3-201ENST00000264596 CHTF8P0CG12 524 aa12.41□□□□□ -0.42
NEIL3-201ENST00000264596 MGAM2Q2M2H8 2515 aa12.41□□□□□ -0.42
NEIL3-201ENST00000264596 STAB2Q8WWQ8 2551 aa12.39□□□□□ -0.43
NEIL3-201ENST00000264596 COL7A1Q02388 2944 aa12.39□□□□□ -0.43
NEIL3-201ENST00000264596 PHF5AQ7RTV0 110 aaKnown RBP12.38□□□□□ -0.43
NEIL3-201ENST00000264596 DEFB116Q30KQ4 102 aa12.38□□□□□ -0.43
NEIL3-201ENST00000264596 KRTAP11-1Q8IUC1 163 aa12.38□□□□□ -0.43
NEIL3-201ENST00000264596 APLNQ9ULZ1 77 aa12.37□□□□□ -0.43
NEIL3-201ENST00000264596 PKIGQ9Y2B9 76 aa12.37□□□□□ -0.43
NEIL3-201ENST00000264596 BRK1Q8WUW1 75 aa12.36□□□□□ -0.43
NEIL3-201ENST00000264596 UBE2AP49459 152 aa12.35□□□□□ -0.43
NEIL3-201ENST00000264596 A0A087WSZ3 146 aa12.34□□□□□ -0.43
NEIL3-201ENST00000264596 C14orf177Q52M58 125 aa12.32□□□□□ -0.44
NEIL3-201ENST00000264596 MPLKIPQ8TAP9 179 aa12.32□□□□□ -0.44
NEIL3-201ENST00000264596 HCG22E2RYF7 251 aa12.3□□□□□ -0.44
NEIL3-201ENST00000264596 IGLV8-61A0A075B6I0 122 aa12.3□□□□□ -0.44
NEIL3-201ENST00000264596 DNAH7Q8WXX0 4024 aa12.29□□□□□ -0.44
NEIL3-201ENST00000264596 CSMD3Q7Z407 3707 aa12.28□□□□□ -0.44
NEIL3-201ENST00000264596 SRRM2Q9UQ35 2752 aaKnown RBP12.27□□□□□ -0.45
NEIL3-201ENST00000264596 LCE6AA0A183 80 aa12.27□□□□□ -0.45
NEIL3-201ENST00000264596 TENM2Q9NT68 2774 aa12.26□□□□□ -0.45
NEIL3-201ENST00000264596 RPL37AP61513 92 aaKnown RBP12.26□□□□□ -0.45
NEIL3-201ENST00000264596 WFDC13Q8IUB5 93 aa12.26□□□□□ -0.45
NEIL3-201ENST00000264596 C9orf163Q8N9P6 203 aa12.25□□□□□ -0.45
NEIL3-201ENST00000264596 LRCOL1A6NCL2 159 aa12.24□□□□□ -0.45
NEIL3-201ENST00000264596 PLECQ15149 4684 aaKnown RBP12.23□□□□□ -0.45
NEIL3-201ENST00000264596 DYNC2H1Q8NCM8 4307 aaKnown RBP12.23□□□□□ -0.45
NEIL3-201ENST00000264596 C1orf195Q5TG92 126 aa12.22□□□□□ -0.45
NEIL3-201ENST00000264596 H0Y9J4 135 aa12.21□□□□□ -0.45
NEIL3-201ENST00000264596 PANO1I0J062 215 aa12.21□□□□□ -0.45
NEIL3-201ENST00000264596 NBDYA0A0U1RRE5 68 aa12.21□□□□□ -0.46
NEIL3-201ENST00000264596 hDV103S1A0JD37 113 aa12.21□□□□□ -0.46
NEIL3-201ENST00000264596 SPRR1BP22528 89 aa12.2□□□□□ -0.46
NEIL3-201ENST00000264596 B9D2Q9BPU9 175 aa12.19□□□□□ -0.46
NEIL3-201ENST00000264596 ZCCHC13Q8WW36 166 aaKnown RBP12.18□□□□□ -0.46
NEIL3-201ENST00000264596 MDFIQ99750 246 aa12.18□□□□□ -0.46
NEIL3-201ENST00000264596 Q6ZRN7 208 aaPredicted RBP12.15□□□□□ -0.47
NEIL3-201ENST00000264596 Q1T7F1 81 aa12.13□□□□□ -0.47
NEIL3-201ENST00000264596 V9GYY9 64 aa12.12□□□□□ -0.47
NEIL3-201ENST00000264596 C1orf64Q8NEQ6 169 aa12.12□□□□□ -0.47
NEIL3-201ENST00000264596 NUPR2A6NF83 97 aa12.1□□□□□ -0.47
NEIL3-201ENST00000264596 LINC00472Q9H8W2 130 aa12.1□□□□□ -0.47
NEIL3-201ENST00000264596 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.1□□□□□ -0.47
NEIL3-201ENST00000264596 KRTAP29-1A8MX34 341 aaPredicted RBP12.1□□□□□ -0.47
NEIL3-201ENST00000264596 PRR15Q8IV56 129 aa12.1□□□□□ -0.47
NEIL3-201ENST00000264596 CASC2Q6XLA1 102 aa12.09□□□□□ -0.47
NEIL3-201ENST00000264596 KRTAP13-1Q8IUC0 172 aa12.09□□□□□ -0.47
NEIL3-201ENST00000264596 PRR4Q16378 134 aa12.09□□□□□ -0.47
NEIL3-201ENST00000264596 A8MWP4 228 aa12.08□□□□□ -0.48
NEIL3-201ENST00000264596 MP68P56378 58 aa12.07□□□□□ -0.48
NEIL3-201ENST00000264596 IGLV9-49A0A0B4J1Y8 123 aa12.06□□□□□ -0.48
NEIL3-201ENST00000264596 SPACA4Q8TDM5 124 aa12.06□□□□□ -0.48
NEIL3-201ENST00000264596 CYP4F30PQ9H0H9 118 aa12.05□□□□□ -0.48
NEIL3-201ENST00000264596 LINC00208Q96KT6 92 aa12.05□□□□□ -0.48
NEIL3-201ENST00000264596 STARD9Q9P2P6 4700 aa12.04□□□□□ -0.48
NEIL3-201ENST00000264596 SEC61GP60059 68 aa12.01□□□□□ -0.49
NEIL3-201ENST00000264596 H0Y9P7 68 aa12□□□□□ -0.49
NEIL3-201ENST00000264596 TRAV22A0A0B4J277 110 aa12□□□□□ -0.49
NEIL3-201ENST00000264596 VPS13DQ5THJ4 4388 aa11.99□□□□□ -0.49
NEIL3-201ENST00000264596 A0A087WTM6 91 aa11.99□□□□□ -0.49
NEIL3-201ENST00000264596 NDUFB1O75438 58 aa11.99□□□□□ -0.49
NEIL3-201ENST00000264596 MMP24-AS1A0A0U1RRL7 71 aa11.96□□□□□ -0.5
NEIL3-201ENST00000264596 PSPHP1O15172 72 aa11.95□□□□□ -0.5
NEIL3-201ENST00000264596 RTL8CO15255 209 aa11.94□□□□□ -0.5
NEIL3-201ENST00000264596 Q96NJ1 140 aa11.92□□□□□ -0.5
NEIL3-201ENST00000264596 PSORS1C2Q9UIG4 136 aa11.92□□□□□ -0.5
NEIL3-201ENST00000264596 PMAIP1Q13794 54 aa11.91□□□□□ -0.5
NEIL3-201ENST00000264596 LINC00483Q53H64 154 aa11.91□□□□□ -0.5
NEIL3-201ENST00000264596 ANAPC11Q9NYG5 84 aa11.91□□□□□ -0.5
NEIL3-201ENST00000264596 HECTD4Q9Y4D8 3996 aa11.9□□□□□ -0.5
NEIL3-201ENST00000264596 MOBPQ13875 183 aa11.89□□□□□ -0.51
NEIL3-201ENST00000264596 H3BPC8 53 aa11.89□□□□□ -0.51
NEIL3-201ENST00000264596 IGLV5-52A0A0A0MRZ9 124 aa11.88□□□□□ -0.51
NEIL3-201ENST00000264596 ZNF706Q9Y5V0 76 aaPredicted RBP11.88□□□□□ -0.51
NEIL3-201ENST00000264596 DNAH2Q9P225 4427 aa11.87□□□□□ -0.51
NEIL3-201ENST00000264596 PRKDCP78527 4128 aaKnown RBP11.87□□□□□ -0.51
NEIL3-201ENST00000264596 DNAH8Q96JB1 4490 aa11.87□□□□□ -0.51
NEIL3-201ENST00000264596 WWC2-AS2Q96NR7 200 aa11.87□□□□□ -0.51
NEIL3-201ENST00000264596 FRAS1Q86XX4 4008 aa11.85□□□□□ -0.51
NEIL3-201ENST00000264596 A8MUN3 132 aa11.85□□□□□ -0.51
NEIL3-201ENST00000264596 KMT2AQ03164 3969 aa11.85□□□□□ -0.51
NEIL3-201ENST00000264596 DNAH17Q9UFH2 4485 aa11.84□□□□□ -0.51
NEIL3-201ENST00000264596 PLAC8Q9NZF1 115 aa11.83□□□□□ -0.52
NEIL3-201ENST00000264596 IGHV6-1A0A0B4J1U7 121 aa11.82□□□□□ -0.52
NEIL3-201ENST00000264596 ZNF861PO60384 105 aa11.82□□□□□ -0.52
NEIL3-201ENST00000264596 Q5VV11 94 aa11.82□□□□□ -0.52
NEIL3-201ENST00000264596 C8orf17Q9NRJ1 99 aa11.82□□□□□ -0.52
NEIL3-201ENST00000264596 Q6ZR54 194 aa11.81□□□□□ -0.52
NEIL3-201ENST00000264596 SPANXA2-OT1Q8N9U9 137 aa11.81□□□□□ -0.52
NEIL3-201ENST00000264596 ASB16-AS1Q495Z4 193 aa11.78□□□□□ -0.52
NEIL3-201ENST00000264596 A0A1B0GVX0 72 aa11.77□□□□□ -0.52
NEIL3-201ENST00000264596 NDUFS5O43920 106 aa11.77□□□□□ -0.52
NEIL3-201ENST00000264596 CDK2AP2O75956 126 aa11.77□□□□□ -0.52
NEIL3-201ENST00000264596 A8MU10 97 aa11.75□□□□□ -0.53
NEIL3-201ENST00000264596 PCOTHQ58A44 107 aa11.75□□□□□ -0.53
NEIL3-201ENST00000264596 FBN3Q75N90 2809 aa11.75□□□□□ -0.53
NEIL3-201ENST00000264596 Q8N9P0 234 aaPredicted RBP11.75□□□□□ -0.53
NEIL3-201ENST00000264596 TP53AIP1Q9HCN2 124 aa11.75□□□□□ -0.53
NEIL3-201ENST00000264596 C1orf134Q5TEV5 83 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms