RNA–Protein interactions for RNA: ENST00000263735.8

EPCAM-201, Transcript of epithelial cell adhesion molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPCAM, Length 1,724 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-201ENST00000263735 PDE6GP18545 87 aa14.49□□□□□ -0.09
EPCAM-201ENST00000263735 SPRR4Q96PI1 79 aa14.48□□□□□ -0.09
EPCAM-201ENST00000263735 Q6ZQT0 140 aa14.47□□□□□ -0.09
EPCAM-201ENST00000263735 F8WEM9 126 aa14.46□□□□□ -0.09
EPCAM-201ENST00000263735 CCKP06307 115 aa14.46□□□□□ -0.09
EPCAM-201ENST00000263735 ACYP1P07311 99 aa14.45□□□□□ -0.1
EPCAM-201ENST00000263735 C21orf62-AS1Q17RA5 79 aa14.45□□□□□ -0.1
EPCAM-201ENST00000263735 LINC00483Q53H64 154 aa14.44□□□□□ -0.1
EPCAM-201ENST00000263735 IGLV8-61A0A075B6I0 122 aa14.4□□□□□ -0.1
EPCAM-201ENST00000263735 RPL37AP61513 92 aaKnown RBP14.4□□□□□ -0.1
EPCAM-201ENST00000263735 APOBP04114 4563 aaKnown RBP14.39□□□□□ -0.11
EPCAM-201ENST00000263735 VPS13BQ7Z7G8 4022 aa14.35□□□□□ -0.11
EPCAM-201ENST00000263735 VPS25Q9BRG1 176 aa14.35□□□□□ -0.11
EPCAM-201ENST00000263735 SMR3BP02814 79 aaPredicted RBP14.35□□□□□ -0.11
EPCAM-201ENST00000263735 CDIP1Q9H305 208 aa14.34□□□□□ -0.11
EPCAM-201ENST00000263735 Q6JHZ5 121 aa14.31□□□□□ -0.12
EPCAM-201ENST00000263735 IGFL1Q6UW32 110 aa14.3□□□□□ -0.12
EPCAM-201ENST00000263735 CDK2AP2O75956 126 aa14.29□□□□□ -0.12
EPCAM-201ENST00000263735 LINC00846Q9NV44 126 aa14.28□□□□□ -0.12
EPCAM-201ENST00000263735 Q8NBF4 154 aa14.27□□□□□ -0.12
EPCAM-201ENST00000263735 IGLV9-49A0A0B4J1Y8 123 aa14.27□□□□□ -0.13
EPCAM-201ENST00000263735 A0A1B0GW54 56 aa14.26□□□□□ -0.13
EPCAM-201ENST00000263735 A0A1W2PNM2 257 aa14.26□□□□□ -0.13
EPCAM-201ENST00000263735 SPINK6Q6UWN8 80 aa14.26□□□□□ -0.13
EPCAM-201ENST00000263735 ANAPC11Q9NYG5 84 aa14.26□□□□□ -0.13
EPCAM-201ENST00000263735 C9orf153Q5TBE3 101 aa14.25□□□□□ -0.13
EPCAM-201ENST00000263735 KRTAP10-4P60372 401 aaPredicted RBP14.23□□□□□ -0.13
EPCAM-201ENST00000263735 FAM229BQ4G0N7 80 aa14.21□□□□□ -0.14
EPCAM-201ENST00000263735 A0A0G2JQZ4 141 aa14.2□□□□□ -0.14
EPCAM-201ENST00000263735 MOBPQ13875 183 aa14.2□□□□□ -0.14
EPCAM-201ENST00000263735 UBL5Q9BZL1 73 aa14.2□□□□□ -0.14
EPCAM-201ENST00000263735 CRYGAP11844 174 aa14.19□□□□□ -0.14
EPCAM-201ENST00000263735 KRTAP1-4P0C5Y4 121 aa14.18□□□□□ -0.14
EPCAM-201ENST00000263735 Q6Q795 121 aa14.18□□□□□ -0.14
EPCAM-201ENST00000263735 LINC00643Q86TS7 51 aa14.18□□□□□ -0.14
EPCAM-201ENST00000263735 FAM229AH3BQW9 127 aa14.16□□□□□ -0.14
EPCAM-201ENST00000263735 PLA2G1BP04054 148 aaKnown RBP14.16□□□□□ -0.14
EPCAM-201ENST00000263735 Q6ZVQ6 151 aa14.12□□□□□ -0.15
EPCAM-201ENST00000263735 SIGMAR1Q99720 223 aa14.12□□□□□ -0.15
EPCAM-201ENST00000263735 A0A087X002 238 aa14.12□□□□□ -0.15
EPCAM-201ENST00000263735 FAT1Q14517 4588 aa14.11□□□□□ -0.15
EPCAM-201ENST00000263735 SSBP3-AS1Q7Z2R9 100 aa14.11□□□□□ -0.15
EPCAM-201ENST00000263735 MT-ATP8P03928 68 aa14.1□□□□□ -0.15
EPCAM-201ENST00000263735 TRBV7-7A0A0K0K1E9 115 aa14.09□□□□□ -0.15
EPCAM-201ENST00000263735 KRTAP13-2Q52LG2 175 aa14.08□□□□□ -0.16
EPCAM-201ENST00000263735 NREPQ16612 68 aa14.07□□□□□ -0.16
EPCAM-201ENST00000263735 HSPG2P98160 4391 aa14.07□□□□□ -0.16
EPCAM-201ENST00000263735 Q5VSD8 79 aa14.07□□□□□ -0.16
EPCAM-201ENST00000263735 A0A087WSZ3 146 aa14.06□□□□□ -0.16
EPCAM-201ENST00000263735 ATP5EP2Q5VTU8 51 aa14.06□□□□□ -0.16
EPCAM-201ENST00000263735 EPPK1P58107 5090 aaKnown RBP14.04□□□□□ -0.16
EPCAM-201ENST00000263735 RYR1P21817 5038 aa14.04□□□□□ -0.16
EPCAM-201ENST00000263735 CD164Q04900 197 aa14.01□□□□□ -0.17
EPCAM-201ENST00000263735 IGKV3D-7A0A0C4DH55 119 aa13.98□□□□□ -0.17
EPCAM-201ENST00000263735 HRCT1Q6UXD1 115 aa13.98□□□□□ -0.17
EPCAM-201ENST00000263735 PKHD1L1Q86WI1 4243 aa13.98□□□□□ -0.17
EPCAM-201ENST00000263735 CXCL6P80162 114 aa13.98□□□□□ -0.17
EPCAM-201ENST00000263735 IMUPQ9GZP8 106 aa13.97□□□□□ -0.17
EPCAM-201ENST00000263735 TYMSOSQ8TAI1 123 aa13.95□□□□□ -0.18
EPCAM-201ENST00000263735 SS18L2Q9UHA2 77 aa13.95□□□□□ -0.18
EPCAM-201ENST00000263735 Q8N1X5 172 aa13.94□□□□□ -0.18
EPCAM-201ENST00000263735 BPY2O14599 106 aa13.93□□□□□ -0.18
EPCAM-201ENST00000263735 PRR26Q8N8Z3 221 aa13.93□□□□□ -0.18
EPCAM-201ENST00000263735 KIAA1109Q2LD37 5005 aa13.92□□□□□ -0.18
EPCAM-201ENST00000263735 KRTAP17-1Q9BYP8 105 aa13.88□□□□□ -0.19
EPCAM-201ENST00000263735 LINC00472Q9H8W2 130 aa13.87□□□□□ -0.19
EPCAM-201ENST00000263735 HIST1H4AP62805 103 aaKnown RBP13.84□□□□□ -0.19
EPCAM-201ENST00000263735 C4orf48Q5BLP8 95 aa13.83□□□□□ -0.2
EPCAM-201ENST00000263735 Q96NJ1 140 aa13.81□□□□□ -0.2
EPCAM-201ENST00000263735 SCGB1A1P11684 91 aa13.81□□□□□ -0.2
EPCAM-201ENST00000263735 DEFB116Q30KQ4 102 aa13.81□□□□□ -0.2
EPCAM-201ENST00000263735 Q5XG85 94 aa13.81□□□□□ -0.2
EPCAM-201ENST00000263735 DSCR10P59022 87 aa13.8□□□□□ -0.2
EPCAM-201ENST00000263735 ASB16-AS1Q495Z4 193 aa13.8□□□□□ -0.2
EPCAM-201ENST00000263735 LINC00304Q8N9R0 145 aa13.8□□□□□ -0.2
EPCAM-201ENST00000263735 J3KT08 172 aa13.79□□□□□ -0.2
EPCAM-201ENST00000263735 SPINK1P00995 79 aa13.79□□□□□ -0.2
EPCAM-201ENST00000263735 SPAG11AQ6PDA7 123 aa13.78□□□□□ -0.2
EPCAM-201ENST00000263735 LIMD2Q9BT23 127 aa13.78□□□□□ -0.2
EPCAM-201ENST00000263735 A0A087WVE0 104 aa13.77□□□□□ -0.21
EPCAM-201ENST00000263735 IGKV4-1P06312 121 aa13.76□□□□□ -0.21
EPCAM-201ENST00000263735 RPS29P62273 56 aaKnown RBP13.75□□□□□ -0.21
EPCAM-201ENST00000263735 Q8N9L7 120 aa13.75□□□□□ -0.21
EPCAM-201ENST00000263735 K7EQZ3 153 aa13.72□□□□□ -0.21
EPCAM-201ENST00000263735 FAM236AA0A1B0GUQ0 79 aa13.7□□□□□ -0.22
EPCAM-201ENST00000263735 FAM236BA0A1B0GV22 79 aa13.7□□□□□ -0.22
EPCAM-201ENST00000263735 A8MWP4 228 aa13.7□□□□□ -0.22
EPCAM-201ENST00000263735 KRTAP10-8P60410 259 aa13.66□□□□□ -0.22
EPCAM-201ENST00000263735 NDUFB1O75438 58 aa13.65□□□□□ -0.22
EPCAM-201ENST00000263735 PRR15Q8IV56 129 aa13.64□□□□□ -0.23
EPCAM-201ENST00000263735 C1orf195Q5TG92 126 aa13.64□□□□□ -0.23
EPCAM-201ENST00000263735 FLG2Q5D862 2391 aaPredicted RBP13.61□□□□□ -0.23
EPCAM-201ENST00000263735 LRP1Q07954 4544 aaKnown RBP13.6□□□□□ -0.23
EPCAM-201ENST00000263735 FAT3Q8TDW7 4589 aa13.58□□□□□ -0.24
EPCAM-201ENST00000263735 BIRC6Q9NR09 4857 aa13.57□□□□□ -0.24
EPCAM-201ENST00000263735 A0A1B0GVX0 72 aa13.57□□□□□ -0.24
EPCAM-201ENST00000263735 HCG22E2RYF7 251 aa13.56□□□□□ -0.24
EPCAM-201ENST00000263735 KRTAP4-5Q9BYR2 181 aa13.56□□□□□ -0.24
EPCAM-201ENST00000263735 TNXBP22105 4242 aa13.55□□□□□ -0.24
EPCAM-201ENST00000263735 ATOX1O00244 68 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms