RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 C1orf137Q5JT78 98 aa14.37□□□□□ -0.11
MCF2L-201ENST00000261963 MRPL55Q7Z7F7 128 aaKnown RBP14.37□□□□□ -0.11
MCF2L-201ENST00000261963 CYP4F30PQ9H0H9 118 aa14.37□□□□□ -0.11
MCF2L-201ENST00000261963 TRAV22A0A0B4J277 110 aa14.36□□□□□ -0.11
MCF2L-201ENST00000261963 DSCR10P59022 87 aa14.36□□□□□ -0.11
MCF2L-201ENST00000261963 Q8NBF4 154 aa14.35□□□□□ -0.11
MCF2L-201ENST00000261963 ST20-AS1Q8NBB2 130 aa14.34□□□□□ -0.11
MCF2L-201ENST00000261963 K7EQZ3 153 aa14.33□□□□□ -0.12
MCF2L-201ENST00000261963 TNP2Q05952 138 aa14.32□□□□□ -0.12
MCF2L-201ENST00000261963 PRR4Q16378 134 aa14.32□□□□□ -0.12
MCF2L-201ENST00000261963 SPRR4Q96PI1 79 aa14.31□□□□□ -0.12
MCF2L-201ENST00000261963 PSCAO43653 123 aa14.29□□□□□ -0.12
MCF2L-201ENST00000261963 PLECQ15149 4684 aaKnown RBP14.28□□□□□ -0.12
MCF2L-201ENST00000261963 HCG22E2RYF7 251 aa14.28□□□□□ -0.12
MCF2L-201ENST00000261963 NDUFB1O75438 58 aa14.28□□□□□ -0.12
MCF2L-201ENST00000261963 A0A096LNI7 61 aa14.27□□□□□ -0.13
MCF2L-201ENST00000261963 DNAH7Q8WXX0 4024 aa14.27□□□□□ -0.13
MCF2L-201ENST00000261963 APLNQ9ULZ1 77 aa14.26□□□□□ -0.13
MCF2L-201ENST00000261963 CNBPP62633 177 aaKnown RBP14.26□□□□□ -0.13
MCF2L-201ENST00000261963 REG3GQ6UW15 175 aa14.26□□□□□ -0.13
MCF2L-201ENST00000261963 CSMD3Q7Z407 3707 aa14.26□□□□□ -0.13
MCF2L-201ENST00000261963 UBE2BP63146 152 aa14.24□□□□□ -0.13
MCF2L-201ENST00000261963 TENM2Q9NT68 2774 aa14.23□□□□□ -0.13
MCF2L-201ENST00000261963 A8MUN3 132 aa14.23□□□□□ -0.13
MCF2L-201ENST00000261963 C16orf90A8MZG2 172 aa14.23□□□□□ -0.13
MCF2L-201ENST00000261963 IGKV2-24A0A0C4DH68 120 aa14.22□□□□□ -0.13
MCF2L-201ENST00000261963 A0A1W2PNN7 141 aa14.22□□□□□ -0.13
MCF2L-201ENST00000261963 UBE2DNLQ8IWF7 75 aa14.22□□□□□ -0.13
MCF2L-201ENST00000261963 MDFIQ99750 246 aa14.2□□□□□ -0.14
MCF2L-201ENST00000261963 MP68P56378 58 aa14.19□□□□□ -0.14
MCF2L-201ENST00000261963 B9D2Q9BPU9 175 aa14.16□□□□□ -0.14
MCF2L-201ENST00000261963 Q5VV11 94 aa14.14□□□□□ -0.15
MCF2L-201ENST00000261963 PRLHP81277 87 aa14.13□□□□□ -0.15
MCF2L-201ENST00000261963 WFDC13Q8IUB5 93 aa14.13□□□□□ -0.15
MCF2L-201ENST00000261963 CHTF8P0CG12 524 aa14.11□□□□□ -0.15
MCF2L-201ENST00000261963 LINC00208Q96KT6 92 aa14.11□□□□□ -0.15
MCF2L-201ENST00000261963 C14orf177Q52M58 125 aa14.1□□□□□ -0.15
MCF2L-201ENST00000261963 LINC00476Q8WZB0 136 aa14.1□□□□□ -0.15
MCF2L-201ENST00000261963 DEFB116Q30KQ4 102 aa14.1□□□□□ -0.15
MCF2L-201ENST00000261963 KRTAP11-1Q8IUC1 163 aa14.1□□□□□ -0.15
MCF2L-201ENST00000261963 A8MU10 97 aa14.09□□□□□ -0.15
MCF2L-201ENST00000261963 UBE2AP49459 152 aa14.07□□□□□ -0.16
MCF2L-201ENST00000261963 VPS13DQ5THJ4 4388 aa14.07□□□□□ -0.16
MCF2L-201ENST00000261963 CD164Q04900 197 aa14.07□□□□□ -0.16
MCF2L-201ENST00000261963 SPANXA2-OT1Q8N9U9 137 aa14.07□□□□□ -0.16
MCF2L-201ENST00000261963 PHF5AQ7RTV0 110 aaKnown RBP14.06□□□□□ -0.16
MCF2L-201ENST00000261963 LIMD2Q9BT23 127 aa14.06□□□□□ -0.16
MCF2L-201ENST00000261963 A0A0G2JQZ4 141 aa14.05□□□□□ -0.16
MCF2L-201ENST00000261963 CHKB-CPT1BH3BT56 60 aa14.05□□□□□ -0.16
MCF2L-201ENST00000261963 Q8N9P0 234 aaPredicted RBP14.05□□□□□ -0.16
MCF2L-201ENST00000261963 STARD9Q9P2P6 4700 aa14.05□□□□□ -0.16
MCF2L-201ENST00000261963 NBDYA0A0U1RRE5 68 aa14.03□□□□□ -0.16
MCF2L-201ENST00000261963 C9orf163Q8N9P6 203 aa14.03□□□□□ -0.16
MCF2L-201ENST00000261963 IGFL1Q6UW32 110 aa14.03□□□□□ -0.16
MCF2L-201ENST00000261963 H3BPC8 53 aa14.02□□□□□ -0.17
MCF2L-201ENST00000261963 H0Y9P7 68 aa14.01□□□□□ -0.17
MCF2L-201ENST00000261963 PRKDCP78527 4128 aaKnown RBP14.01□□□□□ -0.17
MCF2L-201ENST00000261963 SRRM2Q9UQ35 2752 aaKnown RBP14.01□□□□□ -0.17
MCF2L-201ENST00000261963 Q6ZRN7 208 aaPredicted RBP14.01□□□□□ -0.17
MCF2L-201ENST00000261963 KRTAP29-1A8MX34 341 aaPredicted RBP14□□□□□ -0.17
MCF2L-201ENST00000261963 PRR15LQ9BU68 103 aa14□□□□□ -0.17
MCF2L-201ENST00000261963 IGLV8-61A0A075B6I0 122 aa13.99□□□□□ -0.17
MCF2L-201ENST00000261963 A0A087WSZ3 146 aa13.99□□□□□ -0.17
MCF2L-201ENST00000261963 NUPR2A6NF83 97 aa13.98□□□□□ -0.17
MCF2L-201ENST00000261963 RPL37AP61513 92 aaKnown RBP13.98□□□□□ -0.17
MCF2L-201ENST00000261963 PANO1I0J062 215 aa13.96□□□□□ -0.17
MCF2L-201ENST00000261963 H0Y9J4 135 aa13.95□□□□□ -0.18
MCF2L-201ENST00000261963 CASC2Q6XLA1 102 aa13.95□□□□□ -0.18
MCF2L-201ENST00000261963 KTN1-AS1Q86SY8 53 aa13.93□□□□□ -0.18
MCF2L-201ENST00000261963 HECTD4Q9Y4D8 3996 aa13.91□□□□□ -0.18
MCF2L-201ENST00000261963 SPRR1BP22528 89 aa13.91□□□□□ -0.18
MCF2L-201ENST00000261963 SPTSSBQ8NFR3 76 aa13.91□□□□□ -0.18
MCF2L-201ENST00000261963 Q75L30 129 aa13.89□□□□□ -0.19
MCF2L-201ENST00000261963 ATP11AUNQ6ZP68 121 aa13.89□□□□□ -0.19
MCF2L-201ENST00000261963 DNAH2Q9P225 4427 aa13.87□□□□□ -0.19
MCF2L-201ENST00000261963 LCA10Q71F78 164 aa13.86□□□□□ -0.19
MCF2L-201ENST00000261963 A6NED7 52 aa13.85□□□□□ -0.19
MCF2L-201ENST00000261963 LOC101927531A0A1B0GV80 90 aa13.85□□□□□ -0.19
MCF2L-201ENST00000261963 COA5Q86WW8 74 aa13.84□□□□□ -0.19
MCF2L-201ENST00000261963 KRTAP13-1Q8IUC0 172 aa13.84□□□□□ -0.19
MCF2L-201ENST00000261963 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.83□□□□□ -0.19
MCF2L-201ENST00000261963 DNAH17Q9UFH2 4485 aa13.83□□□□□ -0.2
MCF2L-201ENST00000261963 KMT2AQ03164 3969 aa13.83□□□□□ -0.2
MCF2L-201ENST00000261963 A8MWP4 228 aa13.82□□□□□ -0.2
MCF2L-201ENST00000261963 SPACA4Q8TDM5 124 aa13.81□□□□□ -0.2
MCF2L-201ENST00000261963 RBM12B-AS1Q9P1G2 102 aa13.8□□□□□ -0.2
MCF2L-201ENST00000261963 IGLV7-46A0A075B6I9 117 aa13.79□□□□□ -0.2
MCF2L-201ENST00000261963 NDUFS5O43920 106 aa13.79□□□□□ -0.2
MCF2L-201ENST00000261963 MEGF8Q7Z7M0 2845 aa13.78□□□□□ -0.2
MCF2L-201ENST00000261963 DNHD1Q96M86 4753 aa13.78□□□□□ -0.2
MCF2L-201ENST00000261963 A0A087WTM6 91 aa13.78□□□□□ -0.2
MCF2L-201ENST00000261963 A6NN06 94 aa13.75□□□□□ -0.21
MCF2L-201ENST00000261963 LINC00472Q9H8W2 130 aa13.75□□□□□ -0.21
MCF2L-201ENST00000261963 CDC42SE1Q9NRR8 79 aa13.74□□□□□ -0.21
MCF2L-201ENST00000261963 DNAH8Q96JB1 4490 aa13.71□□□□□ -0.21
MCF2L-201ENST00000261963 MMP24-AS1A0A0U1RRL7 71 aa13.69□□□□□ -0.22
MCF2L-201ENST00000261963 Q6ZR54 194 aa13.69□□□□□ -0.22
MCF2L-201ENST00000261963 LINC01558Q9Y6Z2 57 aa13.68□□□□□ -0.22
MCF2L-201ENST00000261963 FRAS1Q86XX4 4008 aa13.67□□□□□ -0.22
MCF2L-201ENST00000261963 RTL8CO15255 209 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms