RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 SPART-AS1P0CW21 52 aa4.65□□□□□ -1.67
CSDE1-201ENST00000261443 Q75L30 129 aa4.64□□□□□ -1.67
CSDE1-201ENST00000261443 DNAH1Q9P2D7 4330 aa4.63□□□□□ -1.67
CSDE1-201ENST00000261443 IGKV2D-24A0A075B6R9 120 aa4.63□□□□□ -1.67
CSDE1-201ENST00000261443 A0A0G2JQZ4 141 aa4.63□□□□□ -1.67
CSDE1-201ENST00000261443 A0A1W2PNN7 141 aa4.63□□□□□ -1.67
CSDE1-201ENST00000261443 KRTAP4-16G5E9R7 235 aaPredicted RBP4.63□□□□□ -1.67
CSDE1-201ENST00000261443 Q8NAQ8 132 aa4.63□□□□□ -1.67
CSDE1-201ENST00000261443 LINC00476Q8WZB0 136 aa4.63□□□□□ -1.67
CSDE1-201ENST00000261443 A6NN06 94 aa4.62□□□□□ -1.67
CSDE1-201ENST00000261443 H3BPC8 53 aa4.62□□□□□ -1.67
CSDE1-201ENST00000261443 APOC4P55056 127 aa4.62□□□□□ -1.67
CSDE1-201ENST00000261443 PHF5AQ7RTV0 110 aaKnown RBP4.62□□□□□ -1.67
CSDE1-201ENST00000261443 DNAH3Q8TD57 4116 aa4.62□□□□□ -1.67
CSDE1-201ENST00000261443 IGLV1-50A0A075B6I6 118 aa4.62□□□□□ -1.67
CSDE1-201ENST00000261443 RPL37AP61513 92 aaKnown RBP4.62□□□□□ -1.67
CSDE1-201ENST00000261443 LOC101927531A0A1B0GV80 90 aa4.61□□□□□ -1.67
CSDE1-201ENST00000261443 FAM168BA1KXE4 195 aa4.61□□□□□ -1.67
CSDE1-201ENST00000261443 SPRR1AP35321 89 aa4.61□□□□□ -1.67
CSDE1-201ENST00000261443 KRTAP10-3P60369 221 aa4.61□□□□□ -1.67
CSDE1-201ENST00000261443 CASC2Q6XLA1 102 aa4.61□□□□□ -1.67
CSDE1-201ENST00000261443 COA5Q86WW8 74 aa4.61□□□□□ -1.67
CSDE1-201ENST00000261443 A0A087WSZ3 146 aa4.6□□□□□ -1.67
CSDE1-201ENST00000261443 KRTAP29-1A8MX34 341 aaPredicted RBP4.6□□□□□ -1.67
CSDE1-201ENST00000261443 IGFL1Q6UW32 110 aa4.6□□□□□ -1.67
CSDE1-201ENST00000261443 CDC42SE1Q9NRR8 79 aa4.6□□□□□ -1.67
CSDE1-201ENST00000261443 TENM3Q9P273 2699 aa4.6□□□□□ -1.67
CSDE1-201ENST00000261443 NSD1Q96L73 2696 aaPredicted RBP4.59□□□□□ -1.67
CSDE1-201ENST00000261443 C9orf163Q8N9P6 203 aa4.59□□□□□ -1.67
CSDE1-201ENST00000261443 PLA2G2DQ9UNK4 145 aa4.59□□□□□ -1.67
CSDE1-201ENST00000261443 MGAM2Q2M2H8 2515 aa4.59□□□□□ -1.67
CSDE1-201ENST00000261443 C7orf65Q6ZTY9 151 aa4.59□□□□□ -1.68
CSDE1-201ENST00000261443 IGLV5-37A0A075B6J1 123 aa4.57□□□□□ -1.68
CSDE1-201ENST00000261443 SMR3AQ99954 134 aa4.57□□□□□ -1.68
CSDE1-201ENST00000261443 TLX1NBP0CAT3 122 aa4.57□□□□□ -1.68
CSDE1-201ENST00000261443 CNBPP62633 177 aaKnown RBP4.57□□□□□ -1.68
CSDE1-201ENST00000261443 MOBPQ13875 183 aa4.57□□□□□ -1.68
CSDE1-201ENST00000261443 IGLV7-46A0A075B6I9 117 aa4.56□□□□□ -1.68
CSDE1-201ENST00000261443 TENM2Q9NT68 2774 aa4.56□□□□□ -1.68
CSDE1-201ENST00000261443 SPAG11AQ6PDA7 123 aa4.56□□□□□ -1.68
CSDE1-201ENST00000261443 KRTAP7-1Q8IUC3 87 aa4.56□□□□□ -1.68
CSDE1-201ENST00000261443 REG3GQ6UW15 175 aa4.55□□□□□ -1.68
CSDE1-201ENST00000261443 J3QKU1 62 aa4.55□□□□□ -1.68
CSDE1-201ENST00000261443 LYSTQ99698 3801 aa4.55□□□□□ -1.68
CSDE1-201ENST00000261443 PCOTHQ58A44 107 aa4.55□□□□□ -1.68
CSDE1-201ENST00000261443 LINC01558Q9Y6Z2 57 aa4.55□□□□□ -1.68
CSDE1-201ENST00000261443 A8MWP4 228 aa4.54□□□□□ -1.68
CSDE1-201ENST00000261443 H3BNG1 76 aa4.53□□□□□ -1.68
CSDE1-201ENST00000261443 LINC01556Q5JQF7 62 aa4.53□□□□□ -1.68
CSDE1-201ENST00000261443 IGLV8-61A0A075B6I0 122 aa4.53□□□□□ -1.68
CSDE1-201ENST00000261443 C11orf45Q8TAV5 145 aa4.53□□□□□ -1.68
CSDE1-201ENST00000261443 H0Y9J4 135 aa4.52□□□□□ -1.69
CSDE1-201ENST00000261443 SPINK7P58062 85 aa4.52□□□□□ -1.69
CSDE1-201ENST00000261443 KRTAP21-3Q3LHN1 58 aa4.52□□□□□ -1.69
CSDE1-201ENST00000261443 PRLHP81277 87 aa4.52□□□□□ -1.69
CSDE1-201ENST00000261443 PLAC8Q9NZF1 115 aa4.51□□□□□ -1.69
CSDE1-201ENST00000261443 LINC00472Q9H8W2 130 aa4.51□□□□□ -1.69
CSDE1-201ENST00000261443 COL7A1Q02388 2944 aa4.51□□□□□ -1.69
CSDE1-201ENST00000261443 HUWE1Q7Z6Z7 4374 aaKnown RBP4.51□□□□□ -1.69
CSDE1-201ENST00000261443 DNAH10Q8IVF4 4471 aa4.5□□□□□ -1.69
CSDE1-201ENST00000261443 OXLD1Q5BKU9 147 aa4.5□□□□□ -1.69
CSDE1-201ENST00000261443 SRRM2Q9UQ35 2752 aaKnown RBP4.5□□□□□ -1.69
CSDE1-201ENST00000261443 C8orf87E5RJ46 101 aa4.5□□□□□ -1.69
CSDE1-201ENST00000261443 C4orf48Q5BLP8 95 aa4.5□□□□□ -1.69
CSDE1-201ENST00000261443 DNAH9Q9NYC9 4486 aa4.5□□□□□ -1.69
CSDE1-201ENST00000261443 MMP24-AS1A0A0U1RRL7 71 aa4.5□□□□□ -1.69
CSDE1-201ENST00000261443 CASC10Q5T4H9 136 aa4.5□□□□□ -1.69
CSDE1-201ENST00000261443 HRES1P13985 223 aa4.48□□□□□ -1.69
CSDE1-201ENST00000261443 LINC00313P59037 77 aa4.48□□□□□ -1.69
CSDE1-201ENST00000261443 TP53AIP1Q9HCN2 124 aa4.47□□□□□ -1.69
CSDE1-201ENST00000261443 DNAH10OSP0CZ25 163 aa4.47□□□□□ -1.69
CSDE1-201ENST00000261443 A0A096LNI7 61 aa4.46□□□□□ -1.69
CSDE1-201ENST00000261443 DEFB131BA0A096LNP1 70 aa4.46□□□□□ -1.7
CSDE1-201ENST00000261443 IGKV2-24A0A0C4DH68 120 aa4.46□□□□□ -1.7
CSDE1-201ENST00000261443 PRAC1Q96KF2 57 aa4.46□□□□□ -1.7
CSDE1-201ENST00000261443 STAB2Q8WWQ8 2551 aa4.46□□□□□ -1.7
CSDE1-201ENST00000261443 DNAH7Q8WXX0 4024 aa4.45□□□□□ -1.7
CSDE1-201ENST00000261443 Q6ZR54 194 aa4.44□□□□□ -1.7
CSDE1-201ENST00000261443 SPRR1BP22528 89 aa4.42□□□□□ -1.7
CSDE1-201ENST00000261443 ASB16-AS1Q495Z4 193 aa4.42□□□□□ -1.7
CSDE1-201ENST00000261443 PRR26Q8N8Z3 221 aa4.42□□□□□ -1.7
CSDE1-201ENST00000261443 C8orf17Q9NRJ1 99 aa4.42□□□□□ -1.7
CSDE1-201ENST00000261443 ADM2Q7Z4H4 148 aa4.42□□□□□ -1.7
CSDE1-201ENST00000261443 DYNC2H1Q8NCM8 4307 aaKnown RBP4.42□□□□□ -1.7
CSDE1-201ENST00000261443 INAFM1C9JVW0 142 aa4.41□□□□□ -1.7
CSDE1-201ENST00000261443 LINC01554Q52M75 96 aa4.41□□□□□ -1.7
CSDE1-201ENST00000261443 PLA2G1BP04054 148 aaKnown RBP4.4□□□□□ -1.7
CSDE1-201ENST00000261443 IGHV6-1A0A0B4J1U7 121 aa4.4□□□□□ -1.71
CSDE1-201ENST00000261443 Q96NJ1 140 aa4.4□□□□□ -1.71
CSDE1-201ENST00000261443 LCE2DQ5TA82 110 aaPredicted RBP4.39□□□□□ -1.71
CSDE1-201ENST00000261443 KRTAP11-1Q8IUC1 163 aa4.39□□□□□ -1.71
CSDE1-201ENST00000261443 MRPL34Q9BQ48 92 aaKnown RBP4.38□□□□□ -1.71
CSDE1-201ENST00000261443 A0A1B0GVX0 72 aa4.38□□□□□ -1.71
CSDE1-201ENST00000261443 H3BS24 57 aa4.38□□□□□ -1.71
CSDE1-201ENST00000261443 CDK2AP2O75956 126 aa4.37□□□□□ -1.71
CSDE1-201ENST00000261443 IGLV9-49A0A0B4J1Y8 123 aa4.37□□□□□ -1.71
CSDE1-201ENST00000261443 ACYP2P14621 99 aa4.36□□□□□ -1.71
CSDE1-201ENST00000261443 MDFIQ99750 246 aa4.36□□□□□ -1.71
CSDE1-201ENST00000261443 CHTF8P0CG12 524 aa4.36□□□□□ -1.71
CSDE1-201ENST00000261443 KRTAP10-11P60412 298 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms