RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 OCR1Q9BZK8 76 aa8.6□□□□□ -1.03
VHL-201ENST00000256474 FAM229BQ4G0N7 80 aa8.59□□□□□ -1.03
VHL-201ENST00000256474 PRO0628Q9UI54 55 aa8.58□□□□□ -1.04
VHL-201ENST00000256474 BCE1O60756 84 aa8.58□□□□□ -1.04
VHL-201ENST00000256474 SMIM26A0A096LP01 95 aa8.57□□□□□ -1.04
VHL-201ENST00000256474 NDUFC1O43677 76 aa8.57□□□□□ -1.04
VHL-201ENST00000256474 IGFL1Q6UW32 110 aa8.57□□□□□ -1.04
VHL-201ENST00000256474 DSCR10P59022 87 aa8.57□□□□□ -1.04
VHL-201ENST00000256474 FP248Q71RG6 208 aaPredicted RBP8.57□□□□□ -1.04
VHL-201ENST00000256474 EPM2AB3EWF7 344 aa8.56□□□□□ -1.04
VHL-201ENST00000256474 KRTAP4-16G5E9R7 235 aaPredicted RBP8.56□□□□□ -1.04
VHL-201ENST00000256474 TLX1NBP0CAT3 122 aa8.55□□□□□ -1.04
VHL-201ENST00000256474 H0Y9J4 135 aa8.54□□□□□ -1.04
VHL-201ENST00000256474 F8WDY8 70 aa8.53□□□□□ -1.04
VHL-201ENST00000256474 DNAH1Q9P2D7 4330 aa8.53□□□□□ -1.04
VHL-201ENST00000256474 IGLV9-49A0A0B4J1Y8 123 aa8.53□□□□□ -1.04
VHL-201ENST00000256474 HCG22E2RYF7 251 aa8.52□□□□□ -1.05
VHL-201ENST00000256474 SPRR1AP35321 89 aa8.52□□□□□ -1.05
VHL-201ENST00000256474 LINC00208Q96KT6 92 aa8.52□□□□□ -1.05
VHL-201ENST00000256474 KRTAP11-1Q8IUC1 163 aa8.51□□□□□ -1.05
VHL-201ENST00000256474 TNP2Q05952 138 aa8.5□□□□□ -1.05
VHL-201ENST00000256474 PMAIP1Q13794 54 aa8.5□□□□□ -1.05
VHL-201ENST00000256474 PLA2G2DQ9UNK4 145 aa8.5□□□□□ -1.05
VHL-201ENST00000256474 C16orf90A8MZG2 172 aa8.49□□□□□ -1.05
VHL-201ENST00000256474 HUWE1Q7Z6Z7 4374 aaKnown RBP8.47□□□□□ -1.05
VHL-201ENST00000256474 FRAS1Q86XX4 4008 aa8.47□□□□□ -1.05
VHL-201ENST00000256474 IGLV5-37A0A075B6J1 123 aa8.46□□□□□ -1.05
VHL-201ENST00000256474 NDUFS5O43920 106 aa8.46□□□□□ -1.06
VHL-201ENST00000256474 MP68P56378 58 aa8.46□□□□□ -1.06
VHL-201ENST00000256474 SPRR4Q96PI1 79 aa8.46□□□□□ -1.06
VHL-201ENST00000256474 ATP5EP56381 51 aaPredicted RBP8.44□□□□□ -1.06
VHL-201ENST00000256474 PANO1I0J062 215 aa8.44□□□□□ -1.06
VHL-201ENST00000256474 C1orf64Q8NEQ6 169 aa8.44□□□□□ -1.06
VHL-201ENST00000256474 ANAPC11Q9NYG5 84 aa8.44□□□□□ -1.06
VHL-201ENST00000256474 CASC2Q6XLA1 102 aa8.43□□□□□ -1.06
VHL-201ENST00000256474 DNAH3Q8TD57 4116 aa8.43□□□□□ -1.06
VHL-201ENST00000256474 CHKB-CPT1BH3BT56 60 aa8.42□□□□□ -1.06
VHL-201ENST00000256474 B9D2Q9BPU9 175 aa8.42□□□□□ -1.06
VHL-201ENST00000256474 H0Y9P7 68 aa8.4□□□□□ -1.07
VHL-201ENST00000256474 PCOTHQ58A44 107 aa8.4□□□□□ -1.07
VHL-201ENST00000256474 MDFIQ99750 246 aa8.39□□□□□ -1.07
VHL-201ENST00000256474 TGP01266 2768 aa8.38□□□□□ -1.07
VHL-201ENST00000256474 SPINK6Q6UWN8 80 aa8.38□□□□□ -1.07
VHL-201ENST00000256474 A6NED7 52 aa8.37□□□□□ -1.07
VHL-201ENST00000256474 C14orf177Q52M58 125 aa8.36□□□□□ -1.07
VHL-201ENST00000256474 APLNQ9ULZ1 77 aa8.35□□□□□ -1.07
VHL-201ENST00000256474 A0A1B0GW54 56 aa8.35□□□□□ -1.07
VHL-201ENST00000256474 CNBPP62633 177 aaKnown RBP8.34□□□□□ -1.07
VHL-201ENST00000256474 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.34□□□□□ -1.07
VHL-201ENST00000256474 IGHV6-1A0A0B4J1U7 121 aa8.34□□□□□ -1.07
VHL-201ENST00000256474 hDV103S1A0JD37 113 aa8.33□□□□□ -1.08
VHL-201ENST00000256474 NDUFB1O75438 58 aa8.33□□□□□ -1.08
VHL-201ENST00000256474 NBDYA0A0U1RRE5 68 aa8.33□□□□□ -1.08
VHL-201ENST00000256474 PLECQ15149 4684 aaKnown RBP8.33□□□□□ -1.08
VHL-201ENST00000256474 C9orf163Q8N9P6 203 aa8.33□□□□□ -1.08
VHL-201ENST00000256474 A8MUN3 132 aa8.32□□□□□ -1.08
VHL-201ENST00000256474 PRR15Q8IV56 129 aa8.32□□□□□ -1.08
VHL-201ENST00000256474 PRR15LQ9BU68 103 aa8.32□□□□□ -1.08
VHL-201ENST00000256474 CDK2AP2O75956 126 aa8.32□□□□□ -1.08
VHL-201ENST00000256474 MOBPQ13875 183 aa8.31□□□□□ -1.08
VHL-201ENST00000256474 A8MWP4 228 aa8.29□□□□□ -1.08
VHL-201ENST00000256474 KMT2AQ03164 3969 aa8.29□□□□□ -1.08
VHL-201ENST00000256474 DMBT1Q9UGM3 2413 aaPredicted RBP8.29□□□□□ -1.08
VHL-201ENST00000256474 TRAV22A0A0B4J277 110 aa8.28□□□□□ -1.08
VHL-201ENST00000256474 ZCCHC13Q8WW36 166 aaKnown RBP8.27□□□□□ -1.09
VHL-201ENST00000256474 LINC00472Q9H8W2 130 aa8.25□□□□□ -1.09
VHL-201ENST00000256474 CIRBP-AS1Q8TBR5 109 aa8.24□□□□□ -1.09
VHL-201ENST00000256474 RETNLBQ9BQ08 111 aa8.24□□□□□ -1.09
VHL-201ENST00000256474 STARD9Q9P2P6 4700 aa8.22□□□□□ -1.09
VHL-201ENST00000256474 IGLV8-61A0A075B6I0 122 aa8.22□□□□□ -1.09
VHL-201ENST00000256474 KRTAP29-1A8MX34 341 aaPredicted RBP8.22□□□□□ -1.09
VHL-201ENST00000256474 PSORS1C2Q9UIG4 136 aa8.22□□□□□ -1.09
VHL-201ENST00000256474 LCE6AA0A183 80 aa8.21□□□□□ -1.09
VHL-201ENST00000256474 A8MU10 97 aa8.21□□□□□ -1.1
VHL-201ENST00000256474 RTL8CO15255 209 aa8.21□□□□□ -1.1
VHL-201ENST00000256474 MMP24-AS1A0A0U1RRL7 71 aa8.19□□□□□ -1.1
VHL-201ENST00000256474 NUPR2A6NF83 97 aa8.19□□□□□ -1.1
VHL-201ENST00000256474 A0A087WTM6 91 aa8.18□□□□□ -1.1
VHL-201ENST00000256474 LY6G6CO95867 125 aa8.18□□□□□ -1.1
VHL-201ENST00000256474 FBN3Q75N90 2809 aa8.18□□□□□ -1.1
VHL-201ENST00000256474 A0A087X002 238 aa8.17□□□□□ -1.1
VHL-201ENST00000256474 NOTCH2NLQ7Z3S9 236 aa8.17□□□□□ -1.1
VHL-201ENST00000256474 PRKDCP78527 4128 aaKnown RBP8.17□□□□□ -1.1
VHL-201ENST00000256474 IGLV5-52A0A0A0MRZ9 124 aa8.16□□□□□ -1.1
VHL-201ENST00000256474 SPAG11AQ6PDA7 123 aa8.16□□□□□ -1.1
VHL-201ENST00000256474 SPRR1BP22528 89 aa8.15□□□□□ -1.1
VHL-201ENST00000256474 SPACA4Q8TDM5 124 aa8.15□□□□□ -1.1
VHL-201ENST00000256474 C8orf17Q9NRJ1 99 aa8.15□□□□□ -1.1
VHL-201ENST00000256474 HECTD4Q9Y4D8 3996 aa8.15□□□□□ -1.1
VHL-201ENST00000256474 Q6ZRN7 208 aaPredicted RBP8.14□□□□□ -1.11
VHL-201ENST00000256474 COA5Q86WW8 74 aa8.14□□□□□ -1.11
VHL-201ENST00000256474 DNAH6Q9C0G6 4158 aa8.14□□□□□ -1.11
VHL-201ENST00000256474 CYP4F30PQ9H0H9 118 aa8.14□□□□□ -1.11
VHL-201ENST00000256474 FLG2Q5D862 2391 aaPredicted RBP8.13□□□□□ -1.11
VHL-201ENST00000256474 MEGF8Q7Z7M0 2845 aa8.12□□□□□ -1.11
VHL-201ENST00000256474 DNAH2Q9P225 4427 aa8.12□□□□□ -1.11
VHL-201ENST00000256474 Q1T7F1 81 aa8.12□□□□□ -1.11
VHL-201ENST00000256474 CD164Q04900 197 aa8.11□□□□□ -1.11
VHL-201ENST00000256474 DNAH8Q96JB1 4490 aa8.1□□□□□ -1.11
VHL-201ENST00000256474 A0A1B0GVX0 72 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms