RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 NUPR2A6NF83 97 aa10.88□□□□□ -0.67
FOXA1-201ENST00000250448 RPL37AP8A6NKH3 93 aa10.88□□□□□ -0.67
FOXA1-201ENST00000250448 KRTAP4-16G5E9R7 235 aaPredicted RBP10.87□□□□□ -0.67
FOXA1-201ENST00000250448 TNP2Q05952 138 aa10.87□□□□□ -0.67
FOXA1-201ENST00000250448 ETDCA0A1B0GVM5 59 aa10.87□□□□□ -0.67
FOXA1-201ENST00000250448 C1orf137Q5JT78 98 aa10.87□□□□□ -0.67
FOXA1-201ENST00000250448 SMIM29Q86T20 159 aa10.87□□□□□ -0.67
FOXA1-201ENST00000250448 HIGD2AQ9BW72 106 aa10.87□□□□□ -0.67
FOXA1-201ENST00000250448 FAM168BA1KXE4 195 aa10.86□□□□□ -0.67
FOXA1-201ENST00000250448 IGLV1-50A0A075B6I6 118 aa10.85□□□□□ -0.67
FOXA1-201ENST00000250448 IGLV5-37A0A075B6J1 123 aa10.85□□□□□ -0.67
FOXA1-201ENST00000250448 SPRR1AP35321 89 aa10.85□□□□□ -0.67
FOXA1-201ENST00000250448 Q8NBF4 154 aa10.85□□□□□ -0.67
FOXA1-201ENST00000250448 ST20-AS1Q8NBB2 130 aa10.85□□□□□ -0.67
FOXA1-201ENST00000250448 FAM30AQ9NZY2 134 aa10.84□□□□□ -0.67
FOXA1-201ENST00000250448 SPRR4Q96PI1 79 aa10.81□□□□□ -0.68
FOXA1-201ENST00000250448 KRTAP7-1Q8IUC3 87 aa10.8□□□□□ -0.68
FOXA1-201ENST00000250448 VPS13DQ5THJ4 4388 aa10.8□□□□□ -0.68
FOXA1-201ENST00000250448 LCE6AA0A183 80 aa10.79□□□□□ -0.68
FOXA1-201ENST00000250448 DSCR10P59022 87 aa10.78□□□□□ -0.68
FOXA1-201ENST00000250448 UBE2BP63146 152 aa10.76□□□□□ -0.69
FOXA1-201ENST00000250448 PSCAO43653 123 aa10.76□□□□□ -0.69
FOXA1-201ENST00000250448 KMT2AQ03164 3969 aa10.75□□□□□ -0.69
FOXA1-201ENST00000250448 K7EQZ3 153 aa10.75□□□□□ -0.69
FOXA1-201ENST00000250448 NBDYA0A0U1RRE5 68 aa10.75□□□□□ -0.69
FOXA1-201ENST00000250448 REG3GQ6UW15 175 aa10.71□□□□□ -0.69
FOXA1-201ENST00000250448 ZCCHC13Q8WW36 166 aaKnown RBP10.71□□□□□ -0.69
FOXA1-201ENST00000250448 LINC00476Q8WZB0 136 aa10.71□□□□□ -0.69
FOXA1-201ENST00000250448 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.71□□□□□ -0.7
FOXA1-201ENST00000250448 C8orf87E5RJ46 101 aa10.7□□□□□ -0.7
FOXA1-201ENST00000250448 A8MU10 97 aa10.7□□□□□ -0.7
FOXA1-201ENST00000250448 KTN1-AS1Q86SY8 53 aa10.7□□□□□ -0.7
FOXA1-201ENST00000250448 HCG22E2RYF7 251 aa10.68□□□□□ -0.7
FOXA1-201ENST00000250448 hDV103S1A0JD37 113 aa10.68□□□□□ -0.7
FOXA1-201ENST00000250448 PRR26Q8N8Z3 221 aa10.67□□□□□ -0.7
FOXA1-201ENST00000250448 A0A0G2JQZ4 141 aa10.66□□□□□ -0.7
FOXA1-201ENST00000250448 A0A1W2PNN7 141 aa10.66□□□□□ -0.7
FOXA1-201ENST00000250448 LY6G6CO95867 125 aa10.66□□□□□ -0.7
FOXA1-201ENST00000250448 IGFL1Q6UW32 110 aa10.66□□□□□ -0.7
FOXA1-201ENST00000250448 LRCOL1A6NCL2 159 aa10.65□□□□□ -0.7
FOXA1-201ENST00000250448 DNAH2Q9P225 4427 aa10.65□□□□□ -0.7
FOXA1-201ENST00000250448 WWC2-AS2Q96NR7 200 aa10.64□□□□□ -0.71
FOXA1-201ENST00000250448 PSPHP1O15172 72 aa10.63□□□□□ -0.71
FOXA1-201ENST00000250448 Q6ZRN7 208 aaPredicted RBP10.63□□□□□ -0.71
FOXA1-201ENST00000250448 C1orf64Q8NEQ6 169 aa10.62□□□□□ -0.71
FOXA1-201ENST00000250448 PRLHP81277 87 aa10.61□□□□□ -0.71
FOXA1-201ENST00000250448 DEFB116Q30KQ4 102 aa10.6□□□□□ -0.71
FOXA1-201ENST00000250448 IGLV8-61A0A075B6I0 122 aa10.59□□□□□ -0.71
FOXA1-201ENST00000250448 A0A087WSZ3 146 aa10.59□□□□□ -0.71
FOXA1-201ENST00000250448 IGKV2-24A0A0C4DH68 120 aa10.59□□□□□ -0.71
FOXA1-201ENST00000250448 WFDC13Q8IUB5 93 aa10.59□□□□□ -0.71
FOXA1-201ENST00000250448 A0A096LNI7 61 aa10.58□□□□□ -0.72
FOXA1-201ENST00000250448 Q6ZR54 194 aa10.57□□□□□ -0.72
FOXA1-201ENST00000250448 CYP4F30PQ9H0H9 118 aa10.57□□□□□ -0.72
FOXA1-201ENST00000250448 HYDINQ4G0P3 5121 aa10.56□□□□□ -0.72
FOXA1-201ENST00000250448 CHTF8P0CG12 524 aa10.55□□□□□ -0.72
FOXA1-201ENST00000250448 C16orf90A8MZG2 172 aa10.55□□□□□ -0.72
FOXA1-201ENST00000250448 CNBPP62633 177 aaKnown RBP10.55□□□□□ -0.72
FOXA1-201ENST00000250448 PRR4Q16378 134 aa10.55□□□□□ -0.72
FOXA1-201ENST00000250448 Q1T7F1 81 aa10.55□□□□□ -0.72
FOXA1-201ENST00000250448 NDUFB1O75438 58 aa10.54□□□□□ -0.72
FOXA1-201ENST00000250448 UBE2AP49459 152 aa10.53□□□□□ -0.72
FOXA1-201ENST00000250448 MP68P56378 58 aa10.53□□□□□ -0.72
FOXA1-201ENST00000250448 RPL37AP61513 92 aaKnown RBP10.53□□□□□ -0.72
FOXA1-201ENST00000250448 C14orf177Q52M58 125 aa10.52□□□□□ -0.72
FOXA1-201ENST00000250448 A0A087WTM6 91 aa10.51□□□□□ -0.73
FOXA1-201ENST00000250448 TRAV22A0A0B4J277 110 aa10.51□□□□□ -0.73
FOXA1-201ENST00000250448 KRTAP29-1A8MX34 341 aaPredicted RBP10.51□□□□□ -0.73
FOXA1-201ENST00000250448 SPTSSBQ8NFR3 76 aa10.51□□□□□ -0.73
FOXA1-201ENST00000250448 C1orf134Q5TEV5 83 aa10.49□□□□□ -0.73
FOXA1-201ENST00000250448 LINC00208Q96KT6 92 aa10.48□□□□□ -0.73
FOXA1-201ENST00000250448 HECTD4Q9Y4D8 3996 aa10.47□□□□□ -0.73
FOXA1-201ENST00000250448 PANO1I0J062 215 aa10.47□□□□□ -0.73
FOXA1-201ENST00000250448 C9orf163Q8N9P6 203 aa10.47□□□□□ -0.73
FOXA1-201ENST00000250448 CASC2Q6XLA1 102 aa10.47□□□□□ -0.73
FOXA1-201ENST00000250448 ALMS1Q8TCU4 4167 aa10.46□□□□□ -0.74
FOXA1-201ENST00000250448 DNAH17Q9UFH2 4485 aa10.45□□□□□ -0.74
FOXA1-201ENST00000250448 SPRR1BP22528 89 aa10.45□□□□□ -0.74
FOXA1-201ENST00000250448 KRTAP11-1Q8IUC1 163 aa10.45□□□□□ -0.74
FOXA1-201ENST00000250448 H0Y9P7 68 aa10.45□□□□□ -0.74
FOXA1-201ENST00000250448 PHF5AQ7RTV0 110 aaKnown RBP10.45□□□□□ -0.74
FOXA1-201ENST00000250448 A8MUN3 132 aa10.44□□□□□ -0.74
FOXA1-201ENST00000250448 A8MWP4 228 aa10.43□□□□□ -0.74
FOXA1-201ENST00000250448 H3BPC8 53 aa10.43□□□□□ -0.74
FOXA1-201ENST00000250448 H0Y9J4 135 aa10.42□□□□□ -0.74
FOXA1-201ENST00000250448 NDUFS5O43920 106 aa10.42□□□□□ -0.74
FOXA1-201ENST00000250448 LINC00472Q9H8W2 130 aa10.42□□□□□ -0.74
FOXA1-201ENST00000250448 DNAH6Q9C0G6 4158 aa10.41□□□□□ -0.74
FOXA1-201ENST00000250448 RTL8CO15255 209 aa10.4□□□□□ -0.74
FOXA1-201ENST00000250448 SPANXA2-OT1Q8N9U9 137 aa10.4□□□□□ -0.74
FOXA1-201ENST00000250448 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.4□□□□□ -0.74
FOXA1-201ENST00000250448 FRAS1Q86XX4 4008 aa10.4□□□□□ -0.75
FOXA1-201ENST00000250448 SACSQ9NZJ4 4579 aa10.39□□□□□ -0.75
FOXA1-201ENST00000250448 SRRM2Q9UQ35 2752 aaKnown RBP10.37□□□□□ -0.75
FOXA1-201ENST00000250448 DNAH11Q96DT5 4516 aa10.35□□□□□ -0.75
FOXA1-201ENST00000250448 IGLV5-52A0A0A0MRZ9 124 aa10.35□□□□□ -0.75
FOXA1-201ENST00000250448 KRTAP10-2P60368 255 aa10.34□□□□□ -0.75
FOXA1-201ENST00000250448 MMP24-AS1A0A0U1RRL7 71 aa10.33□□□□□ -0.76
FOXA1-201ENST00000250448 A6NN06 94 aa10.33□□□□□ -0.76
FOXA1-201ENST00000250448 FAT2Q9NYQ8 4349 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms