RNA–Protein interactions for RNA: ENST00000250113.11

FXR2-201, Transcript of FMR1 autosomal homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXR2, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR2-201ENST00000250113 F8WEM9 126 aa12.25□□□□□ -0.45
FXR2-201ENST00000250113 VPS13DQ5THJ4 4388 aa12.23□□□□□ -0.45
FXR2-201ENST00000250113 FAM30AQ9NZY2 134 aa12.21□□□□□ -0.46
FXR2-201ENST00000250113 TNP2Q05952 138 aa12.2□□□□□ -0.46
FXR2-201ENST00000250113 SMIM29Q86T20 159 aa12.19□□□□□ -0.46
FXR2-201ENST00000250113 FBN3Q75N90 2809 aa12.19□□□□□ -0.46
FXR2-201ENST00000250113 FAM236DA0A1B0GTK5 79 aa12.19□□□□□ -0.46
FXR2-201ENST00000250113 FAM236CP0DP71 79 aa12.19□□□□□ -0.46
FXR2-201ENST00000250113 DNAH2Q9P225 4427 aa12.17□□□□□ -0.46
FXR2-201ENST00000250113 EPM2AB3EWF7 344 aa12.17□□□□□ -0.46
FXR2-201ENST00000250113 RPS28P62857 69 aaKnown RBP12.16□□□□□ -0.46
FXR2-201ENST00000250113 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.16□□□□□ -0.46
FXR2-201ENST00000250113 LINC00476Q8WZB0 136 aa12.15□□□□□ -0.47
FXR2-201ENST00000250113 A0A087WTM6 91 aa12.13□□□□□ -0.47
FXR2-201ENST00000250113 K7EQZ3 153 aa12.12□□□□□ -0.47
FXR2-201ENST00000250113 TMEM254Q8TBM7 123 aa12.12□□□□□ -0.47
FXR2-201ENST00000250113 Q8NBF4 154 aa12.12□□□□□ -0.47
FXR2-201ENST00000250113 UBE2AP49459 152 aa12.12□□□□□ -0.47
FXR2-201ENST00000250113 KLKP1Q107X0 134 aa12.11□□□□□ -0.47
FXR2-201ENST00000250113 Q5XG85 94 aa12.11□□□□□ -0.47
FXR2-201ENST00000250113 HECTD4Q9Y4D8 3996 aa12.1□□□□□ -0.47
FXR2-201ENST00000250113 RPL37AP61513 92 aaKnown RBP12.09□□□□□ -0.47
FXR2-201ENST00000250113 IGFL1Q6UW32 110 aa12.09□□□□□ -0.47
FXR2-201ENST00000250113 DSCR10P59022 87 aa12.08□□□□□ -0.48
FXR2-201ENST00000250113 OCR1Q9BZK8 76 aa12.08□□□□□ -0.48
FXR2-201ENST00000250113 LINC00474Q9P2X8 69 aa12.07□□□□□ -0.48
FXR2-201ENST00000250113 LY6G6CO95867 125 aa12.07□□□□□ -0.48
FXR2-201ENST00000250113 A0A087WSZ3 146 aa12.06□□□□□ -0.48
FXR2-201ENST00000250113 RTL8CO15255 209 aa12.05□□□□□ -0.48
FXR2-201ENST00000250113 SPACA4Q8TDM5 124 aa12.05□□□□□ -0.48
FXR2-201ENST00000250113 Q6ZR54 194 aa12.04□□□□□ -0.48
FXR2-201ENST00000250113 SPRR4Q96PI1 79 aa12.04□□□□□ -0.48
FXR2-201ENST00000250113 WFDC13Q8IUB5 93 aa12.03□□□□□ -0.48
FXR2-201ENST00000250113 PRR4Q16378 134 aa12.01□□□□□ -0.49
FXR2-201ENST00000250113 BCE1O60756 84 aa12□□□□□ -0.49
FXR2-201ENST00000250113 FRAS1Q86XX4 4008 aa12□□□□□ -0.49
FXR2-201ENST00000250113 PKIGQ9Y2B9 76 aa11.99□□□□□ -0.49
FXR2-201ENST00000250113 FAM229BQ4G0N7 80 aa11.98□□□□□ -0.49
FXR2-201ENST00000250113 C1orf134Q5TEV5 83 aa11.98□□□□□ -0.49
FXR2-201ENST00000250113 H0Y9J4 135 aa11.97□□□□□ -0.49
FXR2-201ENST00000250113 LINC00336Q6ZUF6 198 aa11.96□□□□□ -0.49
FXR2-201ENST00000250113 IGLV5-52A0A0A0MRZ9 124 aa11.95□□□□□ -0.5
FXR2-201ENST00000250113 A0A0U1RQV1 116 aa11.95□□□□□ -0.5
FXR2-201ENST00000250113 A0A1B0GW54 56 aa11.94□□□□□ -0.5
FXR2-201ENST00000250113 SERP1Q9Y6X1 66 aa11.94□□□□□ -0.5
FXR2-201ENST00000250113 KRTAP13-1Q8IUC0 172 aa11.94□□□□□ -0.5
FXR2-201ENST00000250113 DNAH17Q9UFH2 4485 aa11.93□□□□□ -0.5
FXR2-201ENST00000250113 FP248Q71RG6 208 aaPredicted RBP11.93□□□□□ -0.5
FXR2-201ENST00000250113 MPLKIPQ8TAP9 179 aa11.93□□□□□ -0.5
FXR2-201ENST00000250113 DNAH6Q9C0G6 4158 aa11.92□□□□□ -0.5
FXR2-201ENST00000250113 IGLV8-61A0A075B6I0 122 aa11.92□□□□□ -0.5
FXR2-201ENST00000250113 IGLV9-49A0A0B4J1Y8 123 aa11.92□□□□□ -0.5
FXR2-201ENST00000250113 PSORS1C2Q9UIG4 136 aa11.92□□□□□ -0.5
FXR2-201ENST00000250113 DNAH8Q96JB1 4490 aa11.92□□□□□ -0.5
FXR2-201ENST00000250113 ANAPC11Q9NYG5 84 aa11.91□□□□□ -0.5
FXR2-201ENST00000250113 SPRR1BP22528 89 aa11.9□□□□□ -0.5
FXR2-201ENST00000250113 HCG22E2RYF7 251 aa11.87□□□□□ -0.51
FXR2-201ENST00000250113 HYDINQ4G0P3 5121 aa11.85□□□□□ -0.51
FXR2-201ENST00000250113 KRTAP10-2P60368 255 aa11.84□□□□□ -0.51
FXR2-201ENST00000250113 PLAC8Q9NZF1 115 aa11.84□□□□□ -0.51
FXR2-201ENST00000250113 NDUFC1O43677 76 aa11.82□□□□□ -0.52
FXR2-201ENST00000250113 DNAH11Q96DT5 4516 aa11.82□□□□□ -0.52
FXR2-201ENST00000250113 PRO0628Q9UI54 55 aa11.79□□□□□ -0.52
FXR2-201ENST00000250113 DNAH5Q8TE73 4624 aa11.78□□□□□ -0.52
FXR2-201ENST00000250113 WWC2-AS2Q96NR7 200 aa11.78□□□□□ -0.52
FXR2-201ENST00000250113 ZNF861PO60384 105 aa11.76□□□□□ -0.53
FXR2-201ENST00000250113 SMIM26A0A096LP01 95 aa11.75□□□□□ -0.53
FXR2-201ENST00000250113 MOBPQ13875 183 aa11.75□□□□□ -0.53
FXR2-201ENST00000250113 LINC00208Q96KT6 92 aa11.75□□□□□ -0.53
FXR2-201ENST00000250113 BRK1Q8WUW1 75 aa11.73□□□□□ -0.53
FXR2-201ENST00000250113 CIRBP-AS1Q8TBR5 109 aa11.73□□□□□ -0.53
FXR2-201ENST00000250113 LINC00472Q9H8W2 130 aa11.73□□□□□ -0.53
FXR2-201ENST00000250113 CASC2Q6XLA1 102 aa11.71□□□□□ -0.53
FXR2-201ENST00000250113 LINC00483Q53H64 154 aa11.7□□□□□ -0.54
FXR2-201ENST00000250113 C1orf64Q8NEQ6 169 aa11.7□□□□□ -0.54
FXR2-201ENST00000250113 ZCCHC13Q8WW36 166 aaKnown RBP11.68□□□□□ -0.54
FXR2-201ENST00000250113 ZNF706Q9Y5V0 76 aaPredicted RBP11.68□□□□□ -0.54
FXR2-201ENST00000250113 IGLV7-43P04211 117 aa11.67□□□□□ -0.54
FXR2-201ENST00000250113 LCE6AA0A183 80 aa11.67□□□□□ -0.54
FXR2-201ENST00000250113 PRR15Q8IV56 129 aa11.67□□□□□ -0.54
FXR2-201ENST00000250113 ALMS1Q8TCU4 4167 aa11.67□□□□□ -0.54
FXR2-201ENST00000250113 PKD1P98161 4303 aa11.65□□□□□ -0.54
FXR2-201ENST00000250113 FAT2Q9NYQ8 4349 aa11.65□□□□□ -0.54
FXR2-201ENST00000250113 LRP1BQ9NZR2 4599 aa11.65□□□□□ -0.54
FXR2-201ENST00000250113 KRTAP29-1A8MX34 341 aaPredicted RBP11.65□□□□□ -0.54
FXR2-201ENST00000250113 KRTAP10-1P60331 282 aa11.65□□□□□ -0.54
FXR2-201ENST00000250113 A8MWP4 228 aa11.64□□□□□ -0.55
FXR2-201ENST00000250113 ATP5EP56381 51 aaPredicted RBP11.64□□□□□ -0.55
FXR2-201ENST00000250113 H0Y9P7 68 aa11.63□□□□□ -0.55
FXR2-201ENST00000250113 Q96NJ1 140 aa11.61□□□□□ -0.55
FXR2-201ENST00000250113 hDV103S1A0JD37 113 aa11.61□□□□□ -0.55
FXR2-201ENST00000250113 MP68P56378 58 aa11.6□□□□□ -0.55
FXR2-201ENST00000250113 PSPHP1O15172 72 aa11.58□□□□□ -0.55
FXR2-201ENST00000250113 IGHV6-1A0A0B4J1U7 121 aa11.58□□□□□ -0.56
FXR2-201ENST00000250113 SPINK6Q6UWN8 80 aa11.57□□□□□ -0.56
FXR2-201ENST00000250113 A0A087X002 238 aa11.57□□□□□ -0.56
FXR2-201ENST00000250113 NOTCH2NLQ7Z3S9 236 aa11.57□□□□□ -0.56
FXR2-201ENST00000250113 PCOTHQ58A44 107 aa11.56□□□□□ -0.56
FXR2-201ENST00000250113 MMP24-AS1A0A0U1RRL7 71 aa11.56□□□□□ -0.56
FXR2-201ENST00000250113 TRAV22A0A0B4J277 110 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms