RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 LINC00476Q8WZB0 136 aa9.08□□□□□ -0.96
HIF3A-202ENST00000244303 STAB2Q8WWQ8 2551 aa9.08□□□□□ -0.96
HIF3A-202ENST00000244303 FAM229BQ4G0N7 80 aa9.07□□□□□ -0.96
HIF3A-202ENST00000244303 DNAH7Q8WXX0 4024 aa9.07□□□□□ -0.96
HIF3A-202ENST00000244303 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.06□□□□□ -0.96
HIF3A-202ENST00000244303 A0A0G2JQZ4 141 aa9.06□□□□□ -0.96
HIF3A-202ENST00000244303 DSCR10P59022 87 aa9.05□□□□□ -0.96
HIF3A-202ENST00000244303 BRK1Q8WUW1 75 aa9.05□□□□□ -0.96
HIF3A-202ENST00000244303 DYNC2H1Q8NCM8 4307 aaKnown RBP9.04□□□□□ -0.96
HIF3A-202ENST00000244303 IGFL1Q6UW32 110 aa9.03□□□□□ -0.96
HIF3A-202ENST00000244303 CSMD3Q7Z407 3707 aa9.03□□□□□ -0.96
HIF3A-202ENST00000244303 K7EQZ3 153 aa9.03□□□□□ -0.96
HIF3A-202ENST00000244303 CHTF8P0CG12 524 aa9.02□□□□□ -0.97
HIF3A-202ENST00000244303 PHF5AQ7RTV0 110 aaKnown RBP9.01□□□□□ -0.97
HIF3A-202ENST00000244303 KRTAP11-1Q8IUC1 163 aa9.01□□□□□ -0.97
HIF3A-202ENST00000244303 PKIGQ9Y2B9 76 aa9□□□□□ -0.97
HIF3A-202ENST00000244303 C14orf177Q52M58 125 aa8.99□□□□□ -0.97
HIF3A-202ENST00000244303 TENM2Q9NT68 2774 aa8.99□□□□□ -0.97
HIF3A-202ENST00000244303 IGLV8-61A0A075B6I0 122 aa8.98□□□□□ -0.97
HIF3A-202ENST00000244303 PLECQ15149 4684 aaKnown RBP8.98□□□□□ -0.97
HIF3A-202ENST00000244303 NUPR2A6NF83 97 aa8.97□□□□□ -0.97
HIF3A-202ENST00000244303 DEFB116Q30KQ4 102 aa8.97□□□□□ -0.97
HIF3A-202ENST00000244303 SRRM2Q9UQ35 2752 aaKnown RBP8.97□□□□□ -0.97
HIF3A-202ENST00000244303 UBE2AP49459 152 aa8.97□□□□□ -0.97
HIF3A-202ENST00000244303 A0A087WSZ3 146 aa8.96□□□□□ -0.97
HIF3A-202ENST00000244303 NBDYA0A0U1RRE5 68 aa8.94□□□□□ -0.98
HIF3A-202ENST00000244303 LRCOL1A6NCL2 159 aa8.94□□□□□ -0.98
HIF3A-202ENST00000244303 LCE6AA0A183 80 aa8.94□□□□□ -0.98
HIF3A-202ENST00000244303 HCG22E2RYF7 251 aa8.94□□□□□ -0.98
HIF3A-202ENST00000244303 C9orf163Q8N9P6 203 aa8.94□□□□□ -0.98
HIF3A-202ENST00000244303 hDV103S1A0JD37 113 aa8.92□□□□□ -0.98
HIF3A-202ENST00000244303 H0Y9J4 135 aa8.92□□□□□ -0.98
HIF3A-202ENST00000244303 C1orf64Q8NEQ6 169 aa8.91□□□□□ -0.98
HIF3A-202ENST00000244303 SPRR1BP22528 89 aa8.9□□□□□ -0.98
HIF3A-202ENST00000244303 PANO1I0J062 215 aa8.89□□□□□ -0.99
HIF3A-202ENST00000244303 RPL37AP61513 92 aaKnown RBP8.89□□□□□ -0.99
HIF3A-202ENST00000244303 Q6ZRN7 208 aaPredicted RBP8.89□□□□□ -0.99
HIF3A-202ENST00000244303 ZCCHC13Q8WW36 166 aaKnown RBP8.89□□□□□ -0.99
HIF3A-202ENST00000244303 PRR4Q16378 134 aa8.88□□□□□ -0.99
HIF3A-202ENST00000244303 WFDC13Q8IUB5 93 aa8.88□□□□□ -0.99
HIF3A-202ENST00000244303 C1orf195Q5TG92 126 aa8.85□□□□□ -0.99
HIF3A-202ENST00000244303 STARD9Q9P2P6 4700 aa8.85□□□□□ -0.99
HIF3A-202ENST00000244303 MP68P56378 58 aa8.84□□□□□ -0.99
HIF3A-202ENST00000244303 NDUFB1O75438 58 aa8.83□□□□□ -1
HIF3A-202ENST00000244303 Q1T7F1 81 aa8.83□□□□□ -1
HIF3A-202ENST00000244303 KRTAP13-1Q8IUC0 172 aa8.83□□□□□ -1
HIF3A-202ENST00000244303 VPS13DQ5THJ4 4388 aa8.82□□□□□ -1
HIF3A-202ENST00000244303 KRTAP29-1A8MX34 341 aaPredicted RBP8.81□□□□□ -1
HIF3A-202ENST00000244303 LINC00472Q9H8W2 130 aa8.81□□□□□ -1
HIF3A-202ENST00000244303 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.81□□□□□ -1
HIF3A-202ENST00000244303 PSPHP1O15172 72 aa8.8□□□□□ -1
HIF3A-202ENST00000244303 PRR15Q8IV56 129 aa8.8□□□□□ -1
HIF3A-202ENST00000244303 CYP4F30PQ9H0H9 118 aa8.8□□□□□ -1
HIF3A-202ENST00000244303 HECTD4Q9Y4D8 3996 aa8.8□□□□□ -1
HIF3A-202ENST00000244303 SPACA4Q8TDM5 124 aa8.79□□□□□ -1
HIF3A-202ENST00000244303 LINC00208Q96KT6 92 aa8.79□□□□□ -1
HIF3A-202ENST00000244303 A8MWP4 228 aa8.79□□□□□ -1
HIF3A-202ENST00000244303 CASC2Q6XLA1 102 aa8.78□□□□□ -1
HIF3A-202ENST00000244303 PRKDCP78527 4128 aaKnown RBP8.78□□□□□ -1
HIF3A-202ENST00000244303 A0A087WTM6 91 aa8.77□□□□□ -1.01
HIF3A-202ENST00000244303 TRAV22A0A0B4J277 110 aa8.77□□□□□ -1.01
HIF3A-202ENST00000244303 IGLV9-49A0A0B4J1Y8 123 aa8.75□□□□□ -1.01
HIF3A-202ENST00000244303 Q6ZR54 194 aa8.74□□□□□ -1.01
HIF3A-202ENST00000244303 V9GYY9 64 aa8.74□□□□□ -1.01
HIF3A-202ENST00000244303 FRAS1Q86XX4 4008 aa8.74□□□□□ -1.01
HIF3A-202ENST00000244303 KMT2AQ03164 3969 aa8.74□□□□□ -1.01
HIF3A-202ENST00000244303 H0Y9P7 68 aa8.74□□□□□ -1.01
HIF3A-202ENST00000244303 DNAH2Q9P225 4427 aa8.73□□□□□ -1.01
HIF3A-202ENST00000244303 MEGF8Q7Z7M0 2845 aa8.72□□□□□ -1.01
HIF3A-202ENST00000244303 MMP24-AS1A0A0U1RRL7 71 aa8.7□□□□□ -1.02
HIF3A-202ENST00000244303 RTL8CO15255 209 aa8.7□□□□□ -1.02
HIF3A-202ENST00000244303 LINC00483Q53H64 154 aa8.7□□□□□ -1.02
HIF3A-202ENST00000244303 DNAH8Q96JB1 4490 aa8.7□□□□□ -1.02
HIF3A-202ENST00000244303 DNAH17Q9UFH2 4485 aa8.69□□□□□ -1.02
HIF3A-202ENST00000244303 A8MUN3 132 aa8.69□□□□□ -1.02
HIF3A-202ENST00000244303 Q96NJ1 140 aa8.69□□□□□ -1.02
HIF3A-202ENST00000244303 PSORS1C2Q9UIG4 136 aa8.69□□□□□ -1.02
HIF3A-202ENST00000244303 H3BPC8 53 aa8.68□□□□□ -1.02
HIF3A-202ENST00000244303 DNHD1Q96M86 4753 aa8.68□□□□□ -1.02
HIF3A-202ENST00000244303 SPANXA2-OT1Q8N9U9 137 aa8.67□□□□□ -1.02
HIF3A-202ENST00000244303 IGLV5-52A0A0A0MRZ9 124 aa8.66□□□□□ -1.02
HIF3A-202ENST00000244303 MOBPQ13875 183 aa8.65□□□□□ -1.02
HIF3A-202ENST00000244303 C1orf134Q5TEV5 83 aa8.65□□□□□ -1.02
HIF3A-202ENST00000244303 WWC2-AS2Q96NR7 200 aa8.65□□□□□ -1.02
HIF3A-202ENST00000244303 ZNF706Q9Y5V0 76 aaPredicted RBP8.65□□□□□ -1.02
HIF3A-202ENST00000244303 FBN3Q75N90 2809 aa8.65□□□□□ -1.03
HIF3A-202ENST00000244303 LY6G6CO95867 125 aa8.64□□□□□ -1.03
HIF3A-202ENST00000244303 ANAPC11Q9NYG5 84 aa8.64□□□□□ -1.03
HIF3A-202ENST00000244303 PLAC8Q9NZF1 115 aa8.64□□□□□ -1.03
HIF3A-202ENST00000244303 PMAIP1Q13794 54 aa8.62□□□□□ -1.03
HIF3A-202ENST00000244303 ZNF861PO60384 105 aa8.61□□□□□ -1.03
HIF3A-202ENST00000244303 Q5VV11 94 aa8.61□□□□□ -1.03
HIF3A-202ENST00000244303 CHKB-CPT1BH3BT56 60 aa8.6□□□□□ -1.03
HIF3A-202ENST00000244303 LIMD2Q9BT23 127 aa8.6□□□□□ -1.03
HIF3A-202ENST00000244303 ASB16-AS1Q495Z4 193 aa8.6□□□□□ -1.03
HIF3A-202ENST00000244303 Q8N9P0 234 aaPredicted RBP8.6□□□□□ -1.03
HIF3A-202ENST00000244303 PRR15LQ9BU68 103 aa8.59□□□□□ -1.03
HIF3A-202ENST00000244303 C8orf17Q9NRJ1 99 aa8.59□□□□□ -1.03
HIF3A-202ENST00000244303 SEC61GP60059 68 aa8.58□□□□□ -1.04
HIF3A-202ENST00000244303 IGHV6-1A0A0B4J1U7 121 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms