RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 SMIM29Q86T20 159 aa5.38□□□□□ -1.55
SPARC-201ENST00000231061 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.37□□□□□ -1.55
SPARC-201ENST00000231061 NDUFB1O75438 58 aa5.37□□□□□ -1.55
SPARC-201ENST00000231061 CIRBP-AS1Q8TBR5 109 aa5.37□□□□□ -1.55
SPARC-201ENST00000231061 XAGE1AQ9HD64 81 aa5.36□□□□□ -1.55
SPARC-201ENST00000231061 UNQ6190/PRO20217Q6UXQ8 127 aa5.36□□□□□ -1.55
SPARC-201ENST00000231061 KLK12Q9UKR0 248 aa5.36□□□□□ -1.55
SPARC-201ENST00000231061 LINC00483Q53H64 154 aa5.35□□□□□ -1.55
SPARC-201ENST00000231061 COX17Q14061 63 aa5.35□□□□□ -1.55
SPARC-201ENST00000231061 C10orf25Q5T742 122 aa5.35□□□□□ -1.55
SPARC-201ENST00000231061 ELOF1P60002 83 aaKnown RBP5.34□□□□□ -1.55
SPARC-201ENST00000231061 COA5Q86WW8 74 aa5.34□□□□□ -1.55
SPARC-201ENST00000231061 ST20-AS1Q8NBB2 130 aa5.34□□□□□ -1.55
SPARC-201ENST00000231061 DNAH10OSP0CZ25 163 aa5.34□□□□□ -1.55
SPARC-201ENST00000231061 PDZD2O15018 2839 aa5.34□□□□□ -1.55
SPARC-201ENST00000231061 ZCCHC13Q8WW36 166 aaKnown RBP5.34□□□□□ -1.56
SPARC-201ENST00000231061 SPART-AS1P0CW21 52 aa5.33□□□□□ -1.56
SPARC-201ENST00000231061 Q9BRP9 147 aa5.33□□□□□ -1.56
SPARC-201ENST00000231061 LINC01558Q9Y6Z2 57 aa5.33□□□□□ -1.56
SPARC-201ENST00000231061 IGKV4-1P06312 121 aa5.33□□□□□ -1.56
SPARC-201ENST00000231061 CAMK2N2Q96S95 79 aa5.32□□□□□ -1.56
SPARC-201ENST00000231061 CASC10Q5T4H9 136 aa5.32□□□□□ -1.56
SPARC-201ENST00000231061 LELP1Q5T871 98 aa5.32□□□□□ -1.56
SPARC-201ENST00000231061 A0A1B0GW54 56 aa5.31□□□□□ -1.56
SPARC-201ENST00000231061 H0Y9P7 68 aa5.31□□□□□ -1.56
SPARC-201ENST00000231061 VWFP04275 2813 aa5.31□□□□□ -1.56
SPARC-201ENST00000231061 LINC00575Q6W349 94 aa5.31□□□□□ -1.56
SPARC-201ENST00000231061 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.3□□□□□ -1.56
SPARC-201ENST00000231061 PDE6GP18545 87 aa5.29□□□□□ -1.56
SPARC-201ENST00000231061 Q6ZQY7 126 aa5.29□□□□□ -1.56
SPARC-201ENST00000231061 ETDCA0A1B0GVM5 59 aa5.29□□□□□ -1.56
SPARC-201ENST00000231061 IGLV5-52A0A0A0MRZ9 124 aa5.28□□□□□ -1.56
SPARC-201ENST00000231061 SPINT4Q6UDR6 99 aa5.28□□□□□ -1.56
SPARC-201ENST00000231061 KRTAP25-1Q3LHN0 102 aa5.28□□□□□ -1.56
SPARC-201ENST00000231061 C6orf48Q9UBA6 75 aa5.27□□□□□ -1.57
SPARC-201ENST00000231061 A0A0J9YWU9 116 aa5.27□□□□□ -1.57
SPARC-201ENST00000231061 A0A087X002 238 aa5.27□□□□□ -1.57
SPARC-201ENST00000231061 WFDC10BQ8IUB3 73 aa5.27□□□□□ -1.57
SPARC-201ENST00000231061 NSD1Q96L73 2696 aaPredicted RBP5.26□□□□□ -1.57
SPARC-201ENST00000231061 TLX1NBP0CAT3 122 aa5.26□□□□□ -1.57
SPARC-201ENST00000231061 IGLV6-57P01721 117 aa5.26□□□□□ -1.57
SPARC-201ENST00000231061 PRR34Q9NV39 138 aa5.26□□□□□ -1.57
SPARC-201ENST00000231061 A8MUU9 505 aa5.26□□□□□ -1.57
SPARC-201ENST00000231061 LOC110117498A0A087WWA1 95 aa5.25□□□□□ -1.57
SPARC-201ENST00000231061 COX7BP24311 80 aa5.25□□□□□ -1.57
SPARC-201ENST00000231061 MUC7Q8TAX7 377 aa5.25□□□□□ -1.57
SPARC-201ENST00000231061 KPRPQ5T749 579 aaPredicted RBP5.25□□□□□ -1.57
SPARC-201ENST00000231061 LCE6AA0A183 80 aa5.24□□□□□ -1.57
SPARC-201ENST00000231061 TENM1Q9UKZ4 2725 aa5.24□□□□□ -1.57
SPARC-201ENST00000231061 IGKV2D-24A0A075B6R9 120 aa5.23□□□□□ -1.57
SPARC-201ENST00000231061 GVQW2A0A096LPI5 108 aaPredicted RBP5.23□□□□□ -1.57
SPARC-201ENST00000231061 KRTAP4-16G5E9R7 235 aaPredicted RBP5.23□□□□□ -1.57
SPARC-201ENST00000231061 CNBPP62633 177 aaKnown RBP5.22□□□□□ -1.57
SPARC-201ENST00000231061 PLAC8Q9NZF1 115 aa5.22□□□□□ -1.57
SPARC-201ENST00000231061 FLG2Q5D862 2391 aaPredicted RBP5.22□□□□□ -1.57
SPARC-201ENST00000231061 FBN1P35555 2871 aaKnown RBP5.22□□□□□ -1.57
SPARC-201ENST00000231061 DEFB116Q30KQ4 102 aa5.21□□□□□ -1.57
SPARC-201ENST00000231061 SPANXA2-OT1Q8N9U9 137 aa5.21□□□□□ -1.58
SPARC-201ENST00000231061 TRRAPQ9Y4A5 3859 aa5.2□□□□□ -1.58
SPARC-201ENST00000231061 H3BQ85 93 aa5.2□□□□□ -1.58
SPARC-201ENST00000231061 TGP01266 2768 aa5.2□□□□□ -1.58
SPARC-201ENST00000231061 PKD1L1Q8TDX9 2849 aa5.2□□□□□ -1.58
SPARC-201ENST00000231061 C15orf56Q8N910 161 aa5.19□□□□□ -1.58
SPARC-201ENST00000231061 DEFB105AQ8NG35 78 aa5.19□□□□□ -1.58
SPARC-201ENST00000231061 CRIPTQ9P021 101 aa5.19□□□□□ -1.58
SPARC-201ENST00000231061 IGLV8-61A0A075B6I0 122 aa5.18□□□□□ -1.58
SPARC-201ENST00000231061 DEFB131BA0A096LNP1 70 aa5.18□□□□□ -1.58
SPARC-201ENST00000231061 C7orf33Q8WU49 177 aa5.18□□□□□ -1.58
SPARC-201ENST00000231061 KRTAP10-11P60412 298 aa5.18□□□□□ -1.58
SPARC-201ENST00000231061 C9orf163Q8N9P6 203 aa5.18□□□□□ -1.58
SPARC-201ENST00000231061 ZNF861PO60384 105 aa5.17□□□□□ -1.58
SPARC-201ENST00000231061 KRTAP26-1Q6PEX3 210 aa5.17□□□□□ -1.58
SPARC-201ENST00000231061 H3BNG1 76 aa5.16□□□□□ -1.58
SPARC-201ENST00000231061 A0A1B0GVX0 72 aa5.15□□□□□ -1.59
SPARC-201ENST00000231061 H3BPC8 53 aa5.15□□□□□ -1.59
SPARC-201ENST00000231061 IGLV1-50A0A075B6I6 118 aa5.14□□□□□ -1.59
SPARC-201ENST00000231061 IGLV5-37A0A075B6J1 123 aa5.14□□□□□ -1.59
SPARC-201ENST00000231061 LINC01556Q5JQF7 62 aa5.14□□□□□ -1.59
SPARC-201ENST00000231061 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.14□□□□□ -1.59
SPARC-201ENST00000231061 A0A1B0GU69 56 aa5.13□□□□□ -1.59
SPARC-201ENST00000231061 SPATA8Q6RVD6 105 aa5.12□□□□□ -1.59
SPARC-201ENST00000231061 PCOTHQ58A44 107 aa5.12□□□□□ -1.59
SPARC-201ENST00000231061 KCNQ1DNQ9H478 68 aa5.12□□□□□ -1.59
SPARC-201ENST00000231061 FAM168BA1KXE4 195 aa5.11□□□□□ -1.59
SPARC-201ENST00000231061 WFDC13Q8IUB5 93 aa5.11□□□□□ -1.59
SPARC-201ENST00000231061 SPRR4Q96PI1 79 aa5.11□□□□□ -1.59
SPARC-201ENST00000231061 TENM3Q9P273 2699 aa5.1□□□□□ -1.59
SPARC-201ENST00000231061 NUPR2A6NF83 97 aa5.1□□□□□ -1.59
SPARC-201ENST00000231061 Q8NBF4 154 aa5.1□□□□□ -1.59
SPARC-201ENST00000231061 UQCR11O14957 56 aa5.1□□□□□ -1.59
SPARC-201ENST00000231061 SSBP3-AS1Q7Z2R9 100 aa5.1□□□□□ -1.59
SPARC-201ENST00000231061 Q8N377 158 aa5.09□□□□□ -1.59
SPARC-201ENST00000231061 KRTAP24-1Q3LI83 254 aa5.09□□□□□ -1.6
SPARC-201ENST00000231061 DMAC1Q96GE9 116 aa5.08□□□□□ -1.6
SPARC-201ENST00000231061 C1orf137Q5JT78 98 aa5.08□□□□□ -1.6
SPARC-201ENST00000231061 Q6ZRX8 168 aa5.07□□□□□ -1.6
SPARC-201ENST00000231061 LINC00472Q9H8W2 130 aa5.06□□□□□ -1.6
SPARC-201ENST00000231061 IGLV7-46A0A075B6I9 117 aa5.06□□□□□ -1.6
SPARC-201ENST00000231061 K7EQZ3 153 aa5.05□□□□□ -1.6
SPARC-201ENST00000231061 IGKV2-24A0A0C4DH68 120 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms