RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 MGAM2Q2M2H8 2515 aa6.1□□□□□ -1.43
HLA-DOA-201ENST00000229829 H3BQ85 93 aa6.09□□□□□ -1.43
HLA-DOA-201ENST00000229829 C1orf137Q5JT78 98 aa6.09□□□□□ -1.43
HLA-DOA-201ENST00000229829 DNAH10Q8IVF4 4471 aa6.09□□□□□ -1.43
HLA-DOA-201ENST00000229829 B9D2Q9BPU9 175 aa6.09□□□□□ -1.44
HLA-DOA-201ENST00000229829 H3BNG1 76 aa6.08□□□□□ -1.44
HLA-DOA-201ENST00000229829 NBEAL1Q6ZS30 2694 aa6.08□□□□□ -1.44
HLA-DOA-201ENST00000229829 C16orf90A8MZG2 172 aa6.08□□□□□ -1.44
HLA-DOA-201ENST00000229829 KTN1-AS1Q86SY8 53 aa6.08□□□□□ -1.44
HLA-DOA-201ENST00000229829 C7orf33Q8WU49 177 aa6.08□□□□□ -1.44
HLA-DOA-201ENST00000229829 DEFB131BA0A096LNP1 70 aa6.07□□□□□ -1.44
HLA-DOA-201ENST00000229829 FAM168BA1KXE4 195 aa6.07□□□□□ -1.44
HLA-DOA-201ENST00000229829 Q5VV11 94 aa6.07□□□□□ -1.44
HLA-DOA-201ENST00000229829 COL6A5A8TX70 2615 aa6.07□□□□□ -1.44
HLA-DOA-201ENST00000229829 FRAS1Q86XX4 4008 aa6.07□□□□□ -1.44
HLA-DOA-201ENST00000229829 DNHD1Q96M86 4753 aa6.07□□□□□ -1.44
HLA-DOA-201ENST00000229829 CASC10Q5T4H9 136 aa6.07□□□□□ -1.44
HLA-DOA-201ENST00000229829 Q8N377 158 aa6.06□□□□□ -1.44
HLA-DOA-201ENST00000229829 LINC01556Q5JQF7 62 aa6.06□□□□□ -1.44
HLA-DOA-201ENST00000229829 DNAH9Q9NYC9 4486 aa6.06□□□□□ -1.44
HLA-DOA-201ENST00000229829 RPL37AP61513 92 aaKnown RBP6.05□□□□□ -1.44
HLA-DOA-201ENST00000229829 KCNQ1DNQ9H478 68 aa6.05□□□□□ -1.44
HLA-DOA-201ENST00000229829 CSMD3Q7Z407 3707 aa6.05□□□□□ -1.44
HLA-DOA-201ENST00000229829 PCOTHQ58A44 107 aa6.05□□□□□ -1.44
HLA-DOA-201ENST00000229829 A0A1W2PNM2 257 aa6.04□□□□□ -1.44
HLA-DOA-201ENST00000229829 A0A096LNI7 61 aa6.04□□□□□ -1.44
HLA-DOA-201ENST00000229829 DNAH17Q9UFH2 4485 aa6.04□□□□□ -1.44
HLA-DOA-201ENST00000229829 Q9BRP9 147 aa6.04□□□□□ -1.44
HLA-DOA-201ENST00000229829 HUWE1Q7Z6Z7 4374 aaKnown RBP6.03□□□□□ -1.44
HLA-DOA-201ENST00000229829 SPAG11AQ6PDA7 123 aa6.03□□□□□ -1.44
HLA-DOA-201ENST00000229829 KRTAP7-1Q8IUC3 87 aa6.03□□□□□ -1.44
HLA-DOA-201ENST00000229829 LINC00588Q9Y4M8 146 aa6.03□□□□□ -1.44
HLA-DOA-201ENST00000229829 SRRM2Q9UQ35 2752 aaKnown RBP6.03□□□□□ -1.44
HLA-DOA-201ENST00000229829 NDUFB1O75438 58 aa6.02□□□□□ -1.45
HLA-DOA-201ENST00000229829 H0Y9P7 68 aa6.02□□□□□ -1.45
HLA-DOA-201ENST00000229829 DSCR10P59022 87 aa6.01□□□□□ -1.45
HLA-DOA-201ENST00000229829 A0A087WSZ3 146 aa6.01□□□□□ -1.45
HLA-DOA-201ENST00000229829 KRTAP4-16G5E9R7 235 aaPredicted RBP6.01□□□□□ -1.45
HLA-DOA-201ENST00000229829 DNAH10OSP0CZ25 163 aa6.01□□□□□ -1.45
HLA-DOA-201ENST00000229829 Q6ZRX8 168 aa6.01□□□□□ -1.45
HLA-DOA-201ENST00000229829 IGLV5-48A0A075B6I7 105 aa6□□□□□ -1.45
HLA-DOA-201ENST00000229829 LCA10Q71F78 164 aa6□□□□□ -1.45
HLA-DOA-201ENST00000229829 Q8N9P0 234 aaPredicted RBP6□□□□□ -1.45
HLA-DOA-201ENST00000229829 LIMD2Q9BT23 127 aa6□□□□□ -1.45
HLA-DOA-201ENST00000229829 IGLV1-50A0A075B6I6 118 aa6□□□□□ -1.45
HLA-DOA-201ENST00000229829 Q8NBF4 154 aa5.99□□□□□ -1.45
HLA-DOA-201ENST00000229829 PRAC1Q96KF2 57 aa5.99□□□□□ -1.45
HLA-DOA-201ENST00000229829 KRTAP24-1Q3LI83 254 aa5.98□□□□□ -1.45
HLA-DOA-201ENST00000229829 TENM2Q9NT68 2774 aa5.98□□□□□ -1.45
HLA-DOA-201ENST00000229829 TLX1NBP0CAT3 122 aa5.98□□□□□ -1.45
HLA-DOA-201ENST00000229829 H0Y9J4 135 aa5.98□□□□□ -1.45
HLA-DOA-201ENST00000229829 DHRS4-AS1Q9P1J3 65 aa5.97□□□□□ -1.45
HLA-DOA-201ENST00000229829 NDUFS5O43920 106 aa5.97□□□□□ -1.45
HLA-DOA-201ENST00000229829 SPRR1AP35321 89 aa5.97□□□□□ -1.45
HLA-DOA-201ENST00000229829 HECTD4Q9Y4D8 3996 aa5.96□□□□□ -1.45
HLA-DOA-201ENST00000229829 COL7A1Q02388 2944 aa5.96□□□□□ -1.45
HLA-DOA-201ENST00000229829 ATP11AUNQ6ZP68 121 aa5.96□□□□□ -1.45
HLA-DOA-201ENST00000229829 ZCCHC13Q8WW36 166 aaKnown RBP5.96□□□□□ -1.45
HLA-DOA-201ENST00000229829 CYP4F30PQ9H0H9 118 aa5.96□□□□□ -1.45
HLA-DOA-201ENST00000229829 STAB2Q8WWQ8 2551 aa5.96□□□□□ -1.46
HLA-DOA-201ENST00000229829 COA5Q86WW8 74 aa5.96□□□□□ -1.46
HLA-DOA-201ENST00000229829 CASC2Q6XLA1 102 aa5.95□□□□□ -1.46
HLA-DOA-201ENST00000229829 IGLV5-37A0A075B6J1 123 aa5.94□□□□□ -1.46
HLA-DOA-201ENST00000229829 LINC00476Q8WZB0 136 aa5.94□□□□□ -1.46
HLA-DOA-201ENST00000229829 C7orf65Q6ZTY9 151 aa5.93□□□□□ -1.46
HLA-DOA-201ENST00000229829 VPS13DQ5THJ4 4388 aa5.92□□□□□ -1.46
HLA-DOA-201ENST00000229829 IGKV2-24A0A0C4DH68 120 aa5.91□□□□□ -1.46
HLA-DOA-201ENST00000229829 LOC101927531A0A1B0GV80 90 aa5.91□□□□□ -1.46
HLA-DOA-201ENST00000229829 PRLHP81277 87 aa5.91□□□□□ -1.46
HLA-DOA-201ENST00000229829 PKHD1P08F94 4074 aa5.91□□□□□ -1.46
HLA-DOA-201ENST00000229829 SPRR4Q96PI1 79 aa5.91□□□□□ -1.46
HLA-DOA-201ENST00000229829 REG3GQ6UW15 175 aa5.91□□□□□ -1.46
HLA-DOA-201ENST00000229829 MOBPQ13875 183 aa5.9□□□□□ -1.46
HLA-DOA-201ENST00000229829 SPINK7P58062 85 aa5.9□□□□□ -1.46
HLA-DOA-201ENST00000229829 C8orf87E5RJ46 101 aa5.9□□□□□ -1.47
HLA-DOA-201ENST00000229829 KRTAP1-5Q9BYS1 174 aa5.9□□□□□ -1.47
HLA-DOA-201ENST00000229829 A6NN06 94 aa5.89□□□□□ -1.47
HLA-DOA-201ENST00000229829 DNAH2Q9P225 4427 aa5.88□□□□□ -1.47
HLA-DOA-201ENST00000229829 PLA2G1BP04054 148 aaKnown RBP5.88□□□□□ -1.47
HLA-DOA-201ENST00000229829 CDC42SE1Q9NRR8 79 aa5.88□□□□□ -1.47
HLA-DOA-201ENST00000229829 LCE6AA0A183 80 aa5.88□□□□□ -1.47
HLA-DOA-201ENST00000229829 IGFL1Q6UW32 110 aa5.88□□□□□ -1.47
HLA-DOA-201ENST00000229829 ADM2Q7Z4H4 148 aa5.88□□□□□ -1.47
HLA-DOA-201ENST00000229829 A0A1B0GW54 56 aa5.87□□□□□ -1.47
HLA-DOA-201ENST00000229829 VPS13BQ7Z7G8 4022 aa5.87□□□□□ -1.47
HLA-DOA-201ENST00000229829 PLECQ15149 4684 aaKnown RBP5.87□□□□□ -1.47
HLA-DOA-201ENST00000229829 Q75L30 129 aa5.87□□□□□ -1.47
HLA-DOA-201ENST00000229829 KRTAP11-1Q8IUC1 163 aa5.87□□□□□ -1.47
HLA-DOA-201ENST00000229829 K7EIL1 84 aa5.86□□□□□ -1.47
HLA-DOA-201ENST00000229829 FAM229AH3BQW9 127 aa5.86□□□□□ -1.47
HLA-DOA-201ENST00000229829 LINC00313P59037 77 aa5.86□□□□□ -1.47
HLA-DOA-201ENST00000229829 CHTF8P0CG12 524 aa5.85□□□□□ -1.47
HLA-DOA-201ENST00000229829 PHF5AQ7RTV0 110 aaKnown RBP5.83□□□□□ -1.48
HLA-DOA-201ENST00000229829 SPANXA2-OT1Q8N9U9 137 aa5.81□□□□□ -1.48
HLA-DOA-201ENST00000229829 CNBPP62633 177 aaKnown RBP5.8□□□□□ -1.48
HLA-DOA-201ENST00000229829 DNAH8Q96JB1 4490 aa5.8□□□□□ -1.48
HLA-DOA-201ENST00000229829 RYR2Q92736 4967 aa5.79□□□□□ -1.48
HLA-DOA-201ENST00000229829 IGLV8-61A0A075B6I0 122 aa5.78□□□□□ -1.48
HLA-DOA-201ENST00000229829 IGHV6-1A0A0B4J1U7 121 aa5.78□□□□□ -1.48
HLA-DOA-201ENST00000229829 KMT2AQ03164 3969 aa5.77□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms