RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 IGFL1Q6UW32 110 aa10.24□□□□□ -0.77
LTBR-201ENST00000228918 A0A0G2JQZ4 141 aa10.23□□□□□ -0.77
LTBR-201ENST00000228918 LCE6AA0A183 80 aa10.23□□□□□ -0.77
LTBR-201ENST00000228918 PSCAO43653 123 aa10.23□□□□□ -0.77
LTBR-201ENST00000228918 V9GYY9 64 aa10.23□□□□□ -0.77
LTBR-201ENST00000228918 IGLV8-61A0A075B6I0 122 aa10.22□□□□□ -0.77
LTBR-201ENST00000228918 hDV103S1A0JD37 113 aa10.21□□□□□ -0.78
LTBR-201ENST00000228918 STAB2Q8WWQ8 2551 aa10.2□□□□□ -0.78
LTBR-201ENST00000228918 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.19□□□□□ -0.78
LTBR-201ENST00000228918 UBE2DNLQ8IWF7 75 aa10.19□□□□□ -0.78
LTBR-201ENST00000228918 APLNQ9ULZ1 77 aa10.17□□□□□ -0.78
LTBR-201ENST00000228918 DYNC2H1Q8NCM8 4307 aaKnown RBP10.17□□□□□ -0.78
LTBR-201ENST00000228918 MGAM2Q2M2H8 2515 aa10.17□□□□□ -0.78
LTBR-201ENST00000228918 HCG22E2RYF7 251 aa10.17□□□□□ -0.78
LTBR-201ENST00000228918 C14orf177Q52M58 125 aa10.17□□□□□ -0.78
LTBR-201ENST00000228918 KRTAP11-1Q8IUC1 163 aa10.17□□□□□ -0.78
LTBR-201ENST00000228918 COL7A1Q02388 2944 aa10.16□□□□□ -0.78
LTBR-201ENST00000228918 CHTF8P0CG12 524 aa10.16□□□□□ -0.78
LTBR-201ENST00000228918 PHF5AQ7RTV0 110 aaKnown RBP10.16□□□□□ -0.78
LTBR-201ENST00000228918 SEC61GP60059 68 aa10.16□□□□□ -0.78
LTBR-201ENST00000228918 Q1T7F1 81 aa10.16□□□□□ -0.78
LTBR-201ENST00000228918 A0A087WSZ3 146 aa10.15□□□□□ -0.78
LTBR-201ENST00000228918 PRR15Q8IV56 129 aa10.15□□□□□ -0.78
LTBR-201ENST00000228918 UBE2AP49459 152 aa10.14□□□□□ -0.79
LTBR-201ENST00000228918 ZCCHC13Q8WW36 166 aaKnown RBP10.14□□□□□ -0.79
LTBR-201ENST00000228918 H0Y9J4 135 aa10.13□□□□□ -0.79
LTBR-201ENST00000228918 DEFB116Q30KQ4 102 aa10.13□□□□□ -0.79
LTBR-201ENST00000228918 C1orf64Q8NEQ6 169 aa10.13□□□□□ -0.79
LTBR-201ENST00000228918 SPRR1BP22528 89 aa10.12□□□□□ -0.79
LTBR-201ENST00000228918 DNAH7Q8WXX0 4024 aa10.11□□□□□ -0.79
LTBR-201ENST00000228918 C9orf163Q8N9P6 203 aa10.1□□□□□ -0.79
LTBR-201ENST00000228918 LRCOL1A6NCL2 159 aa10.09□□□□□ -0.79
LTBR-201ENST00000228918 MDFIQ99750 246 aa10.08□□□□□ -0.8
LTBR-201ENST00000228918 CSMD3Q7Z407 3707 aa10.07□□□□□ -0.8
LTBR-201ENST00000228918 WFDC13Q8IUB5 93 aa10.07□□□□□ -0.8
LTBR-201ENST00000228918 PLECQ15149 4684 aaKnown RBP10.06□□□□□ -0.8
LTBR-201ENST00000228918 RPL37AP61513 92 aaKnown RBP10.05□□□□□ -0.8
LTBR-201ENST00000228918 CYP4F30PQ9H0H9 118 aa10.05□□□□□ -0.8
LTBR-201ENST00000228918 SRRM2Q9UQ35 2752 aaKnown RBP10.05□□□□□ -0.8
LTBR-201ENST00000228918 NBDYA0A0U1RRE5 68 aa10.03□□□□□ -0.8
LTBR-201ENST00000228918 KRTAP29-1A8MX34 341 aaPredicted RBP10.03□□□□□ -0.8
LTBR-201ENST00000228918 PMAIP1Q13794 54 aa10.03□□□□□ -0.8
LTBR-201ENST00000228918 B9D2Q9BPU9 175 aa10.03□□□□□ -0.8
LTBR-201ENST00000228918 TRAV22A0A0B4J277 110 aa10.03□□□□□ -0.8
LTBR-201ENST00000228918 PANO1I0J062 215 aa10.02□□□□□ -0.81
LTBR-201ENST00000228918 TENM2Q9NT68 2774 aa10.02□□□□□ -0.81
LTBR-201ENST00000228918 Q6ZRN7 208 aaPredicted RBP10.02□□□□□ -0.81
LTBR-201ENST00000228918 KRTAP13-1Q8IUC0 172 aa10.01□□□□□ -0.81
LTBR-201ENST00000228918 LINC00472Q9H8W2 130 aa10.01□□□□□ -0.81
LTBR-201ENST00000228918 PSPHP1O15172 72 aa10□□□□□ -0.81
LTBR-201ENST00000228918 A8MWP4 228 aa9.99□□□□□ -0.81
LTBR-201ENST00000228918 CASC2Q6XLA1 102 aa9.98□□□□□ -0.81
LTBR-201ENST00000228918 MP68P56378 58 aa9.97□□□□□ -0.81
LTBR-201ENST00000228918 NDUFB1O75438 58 aa9.95□□□□□ -0.82
LTBR-201ENST00000228918 NUPR2A6NF83 97 aa9.95□□□□□ -0.82
LTBR-201ENST00000228918 PRR4Q16378 134 aa9.95□□□□□ -0.82
LTBR-201ENST00000228918 KRTAP21-3Q3LHN1 58 aa9.95□□□□□ -0.82
LTBR-201ENST00000228918 SPACA4Q8TDM5 124 aa9.94□□□□□ -0.82
LTBR-201ENST00000228918 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.93□□□□□ -0.82
LTBR-201ENST00000228918 LINC00208Q96KT6 92 aa9.93□□□□□ -0.82
LTBR-201ENST00000228918 A8MUN3 132 aa9.91□□□□□ -0.82
LTBR-201ENST00000228918 VPS13DQ5THJ4 4388 aa9.91□□□□□ -0.82
LTBR-201ENST00000228918 H0Y9P7 68 aa9.91□□□□□ -0.82
LTBR-201ENST00000228918 STARD9Q9P2P6 4700 aa9.9□□□□□ -0.82
LTBR-201ENST00000228918 H3BPC8 53 aa9.89□□□□□ -0.83
LTBR-201ENST00000228918 MMP24-AS1A0A0U1RRL7 71 aa9.89□□□□□ -0.83
LTBR-201ENST00000228918 Q5VV11 94 aa9.89□□□□□ -0.83
LTBR-201ENST00000228918 HECTD4Q9Y4D8 3996 aa9.88□□□□□ -0.83
LTBR-201ENST00000228918 DNHD1Q96M86 4753 aa9.88□□□□□ -0.83
LTBR-201ENST00000228918 IGLV9-49A0A0B4J1Y8 123 aa9.87□□□□□ -0.83
LTBR-201ENST00000228918 LINC00483Q53H64 154 aa9.86□□□□□ -0.83
LTBR-201ENST00000228918 Q96NJ1 140 aa9.86□□□□□ -0.83
LTBR-201ENST00000228918 A0A087WTM6 91 aa9.86□□□□□ -0.83
LTBR-201ENST00000228918 A8MU10 97 aa9.84□□□□□ -0.83
LTBR-201ENST00000228918 SPANXA2-OT1Q8N9U9 137 aa9.84□□□□□ -0.83
LTBR-201ENST00000228918 PRKDCP78527 4128 aaKnown RBP9.82□□□□□ -0.84
LTBR-201ENST00000228918 Q8N9P0 234 aaPredicted RBP9.82□□□□□ -0.84
LTBR-201ENST00000228918 LIMD2Q9BT23 127 aa9.81□□□□□ -0.84
LTBR-201ENST00000228918 ZNF706Q9Y5V0 76 aaPredicted RBP9.81□□□□□ -0.84
LTBR-201ENST00000228918 ASB16-AS1Q495Z4 193 aa9.8□□□□□ -0.84
LTBR-201ENST00000228918 RTL8CO15255 209 aa9.8□□□□□ -0.84
LTBR-201ENST00000228918 CD164Q04900 197 aa9.8□□□□□ -0.84
LTBR-201ENST00000228918 WWC2-AS2Q96NR7 200 aa9.8□□□□□ -0.84
LTBR-201ENST00000228918 PSORS1C2Q9UIG4 136 aa9.8□□□□□ -0.84
LTBR-201ENST00000228918 DNAH17Q9UFH2 4485 aa9.79□□□□□ -0.84
LTBR-201ENST00000228918 IGLV5-52A0A0A0MRZ9 124 aa9.79□□□□□ -0.84
LTBR-201ENST00000228918 MOBPQ13875 183 aa9.79□□□□□ -0.84
LTBR-201ENST00000228918 DNAH8Q96JB1 4490 aa9.78□□□□□ -0.84
LTBR-201ENST00000228918 FRAS1Q86XX4 4008 aa9.77□□□□□ -0.85
LTBR-201ENST00000228918 CHKB-CPT1BH3BT56 60 aa9.76□□□□□ -0.85
LTBR-201ENST00000228918 PLAC8Q9NZF1 115 aa9.76□□□□□ -0.85
LTBR-201ENST00000228918 DNAH2Q9P225 4427 aa9.76□□□□□ -0.85
LTBR-201ENST00000228918 C8orf17Q9NRJ1 99 aa9.76□□□□□ -0.85
LTBR-201ENST00000228918 KMT2AQ03164 3969 aa9.75□□□□□ -0.85
LTBR-201ENST00000228918 ZNF861PO60384 105 aa9.73□□□□□ -0.85
LTBR-201ENST00000228918 Q6ZR54 194 aa9.73□□□□□ -0.85
LTBR-201ENST00000228918 TP53AIP1Q9HCN2 124 aa9.73□□□□□ -0.85
LTBR-201ENST00000228918 PRR15LQ9BU68 103 aa9.73□□□□□ -0.85
LTBR-201ENST00000228918 A0A1B0GVX0 72 aa9.72□□□□□ -0.85
LTBR-201ENST00000228918 ANAPC11Q9NYG5 84 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms