RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 OCIAD2Q56VL3 154 aa8.68□□□□□ -1.02
UPK3A-201ENST00000216211 A0A0U1RQV1 116 aa8.67□□□□□ -1.02
UPK3A-201ENST00000216211 TEN1Q86WV5 123 aa8.67□□□□□ -1.02
UPK3A-201ENST00000216211 C3orf22Q8N5N4 141 aa8.67□□□□□ -1.02
UPK3A-201ENST00000216211 ZNF73O43830 326 aaPredicted RBP8.66□□□□□ -1.02
UPK3A-201ENST00000216211 LINC00575Q6W349 94 aa8.66□□□□□ -1.02
UPK3A-201ENST00000216211 KCNQ1DNQ9H478 68 aa8.66□□□□□ -1.02
UPK3A-201ENST00000216211 FAT4Q6V0I7 4981 aa8.66□□□□□ -1.02
UPK3A-201ENST00000216211 SNCGO76070 127 aa8.65□□□□□ -1.02
UPK3A-201ENST00000216211 BAALC-AS2P0C853 105 aa8.65□□□□□ -1.02
UPK3A-201ENST00000216211 HIGD2AQ9BW72 106 aa8.65□□□□□ -1.02
UPK3A-201ENST00000216211 K7ERU9 68 aa8.64□□□□□ -1.03
UPK3A-201ENST00000216211 DNAL4O96015 105 aa8.64□□□□□ -1.03
UPK3A-201ENST00000216211 PRYO14603 147 aa8.63□□□□□ -1.03
UPK3A-201ENST00000216211 COX7BP24311 80 aa8.63□□□□□ -1.03
UPK3A-201ENST00000216211 ELOF1P60002 83 aaKnown RBP8.63□□□□□ -1.03
UPK3A-201ENST00000216211 PPDPFLQ8WWR9 84 aa8.63□□□□□ -1.03
UPK3A-201ENST00000216211 IGLV7-46A0A075B6I9 117 aa8.62□□□□□ -1.03
UPK3A-201ENST00000216211 CDIP1Q9H305 208 aa8.62□□□□□ -1.03
UPK3A-201ENST00000216211 hADV29S1A0JD25 119 aa8.61□□□□□ -1.03
UPK3A-201ENST00000216211 TPRXLQ17RH7 258 aa8.61□□□□□ -1.03
UPK3A-201ENST00000216211 SPRR4Q96PI1 79 aa8.61□□□□□ -1.03
UPK3A-201ENST00000216211 J3QR89 54 aa8.6□□□□□ -1.03
UPK3A-201ENST00000216211 SPRR1AP35321 89 aa8.6□□□□□ -1.03
UPK3A-201ENST00000216211 ORMDL1Q9P0S3 153 aa8.6□□□□□ -1.03
UPK3A-201ENST00000216211 KRTAP4-16G5E9R7 235 aaPredicted RBP8.58□□□□□ -1.04
UPK3A-201ENST00000216211 H3BQ85 93 aa8.57□□□□□ -1.04
UPK3A-201ENST00000216211 ZNF706Q9Y5V0 76 aaPredicted RBP8.57□□□□□ -1.04
UPK3A-201ENST00000216211 TEX49A0A1B0GTD5 131 aa8.56□□□□□ -1.04
UPK3A-201ENST00000216211 LCE2AQ5TA79 106 aaPredicted RBP8.56□□□□□ -1.04
UPK3A-201ENST00000216211 SPAG11AQ6PDA7 123 aa8.56□□□□□ -1.04
UPK3A-201ENST00000216211 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.56□□□□□ -1.04
UPK3A-201ENST00000216211 B5MCH6 92 aa8.55□□□□□ -1.04
UPK3A-201ENST00000216211 TMEM256-PLSCR3K7ERE1 68 aa8.55□□□□□ -1.04
UPK3A-201ENST00000216211 SMCR5Q8TEV8 140 aa8.55□□□□□ -1.04
UPK3A-201ENST00000216211 ETDCA0A1B0GVM5 59 aa8.54□□□□□ -1.04
UPK3A-201ENST00000216211 C4orf48Q5BLP8 95 aa8.54□□□□□ -1.04
UPK3A-201ENST00000216211 OBSCN-AS1Q96MR7 158 aa8.54□□□□□ -1.04
UPK3A-201ENST00000216211 GHRHP01286 108 aa8.53□□□□□ -1.04
UPK3A-201ENST00000216211 Q6ZQY7 126 aa8.53□□□□□ -1.04
UPK3A-201ENST00000216211 Q6ZRX8 168 aa8.53□□□□□ -1.04
UPK3A-201ENST00000216211 Q8NBF4 154 aa8.53□□□□□ -1.04
UPK3A-201ENST00000216211 DHRS4-AS1Q9P1J3 65 aa8.52□□□□□ -1.05
UPK3A-201ENST00000216211 KRTAP9-2Q9BYQ4 174 aa8.51□□□□□ -1.05
UPK3A-201ENST00000216211 FP248Q71RG6 208 aaPredicted RBP8.5□□□□□ -1.05
UPK3A-201ENST00000216211 JMJD7-PLA2G4BH0Y9G9 81 aa8.49□□□□□ -1.05
UPK3A-201ENST00000216211 LINC00483Q53H64 154 aa8.49□□□□□ -1.05
UPK3A-201ENST00000216211 GAGE2AQ6NT46 116 aa8.48□□□□□ -1.05
UPK3A-201ENST00000216211 Q9BRP9 147 aa8.48□□□□□ -1.05
UPK3A-201ENST00000216211 ERC2-IT1O76042 136 aa8.47□□□□□ -1.05
UPK3A-201ENST00000216211 IGLV9-49A0A0B4J1Y8 123 aa8.46□□□□□ -1.06
UPK3A-201ENST00000216211 SPINK1P00995 79 aa8.46□□□□□ -1.06
UPK3A-201ENST00000216211 KRTAP13-3Q3SY46 172 aa8.46□□□□□ -1.06
UPK3A-201ENST00000216211 FAM240AA0A1B0GVK7 77 aa8.45□□□□□ -1.06
UPK3A-201ENST00000216211 MOBPQ13875 183 aa8.45□□□□□ -1.06
UPK3A-201ENST00000216211 VPS25Q9BRG1 176 aa8.45□□□□□ -1.06
UPK3A-201ENST00000216211 ACYP1P07311 99 aa8.43□□□□□ -1.06
UPK3A-201ENST00000216211 LINC01547P58512 204 aaPredicted RBP8.43□□□□□ -1.06
UPK3A-201ENST00000216211 LAMTOR3Q9UHA4 124 aa8.43□□□□□ -1.06
UPK3A-201ENST00000216211 IGLV5-48A0A075B6I7 105 aa8.42□□□□□ -1.06
UPK3A-201ENST00000216211 SSBP3-AS1Q7Z2R9 100 aa8.42□□□□□ -1.06
UPK3A-201ENST00000216211 C14orf132Q9NPU4 83 aa8.42□□□□□ -1.06
UPK3A-201ENST00000216211 NDUFV3P56181 108 aaKnown RBP8.41□□□□□ -1.06
UPK3A-201ENST00000216211 RBM3P98179 157 aaKnown RBP8.41□□□□□ -1.06
UPK3A-201ENST00000216211 Q8N377 158 aa8.41□□□□□ -1.06
UPK3A-201ENST00000216211 CCKP06307 115 aa8.4□□□□□ -1.06
UPK3A-201ENST00000216211 ASB16-AS1Q495Z4 193 aa8.4□□□□□ -1.06
UPK3A-201ENST00000216211 LOC110117498A0A087WWA1 95 aa8.39□□□□□ -1.07
UPK3A-201ENST00000216211 RPS29P62273 56 aaKnown RBP8.39□□□□□ -1.07
UPK3A-201ENST00000216211 PDE6GP18545 87 aa8.38□□□□□ -1.07
UPK3A-201ENST00000216211 ST20-AS1Q8NBB2 130 aa8.38□□□□□ -1.07
UPK3A-201ENST00000216211 DEFB105AQ8NG35 78 aa8.38□□□□□ -1.07
UPK3A-201ENST00000216211 C9orf153Q5TBE3 101 aa8.37□□□□□ -1.07
UPK3A-201ENST00000216211 KRTAP4-1Q9BYQ7 146 aa8.37□□□□□ -1.07
UPK3A-201ENST00000216211 A0A1B0GV72 72 aa8.36□□□□□ -1.07
UPK3A-201ENST00000216211 C21orf62-AS1Q17RA5 79 aa8.36□□□□□ -1.07
UPK3A-201ENST00000216211 Q6ZQT0 140 aa8.36□□□□□ -1.07
UPK3A-201ENST00000216211 DSCR8Q96T75 97 aa8.36□□□□□ -1.07
UPK3A-201ENST00000216211 TRBV7-4A0A0J9YYF1 115 aa8.35□□□□□ -1.07
UPK3A-201ENST00000216211 SEC61BP60468 96 aaKnown RBP8.35□□□□□ -1.07
UPK3A-201ENST00000216211 SPRR1BP22528 89 aa8.33□□□□□ -1.08
UPK3A-201ENST00000216211 SIGMAR1Q99720 223 aa8.33□□□□□ -1.08
UPK3A-201ENST00000216211 SMIM29Q86T20 159 aa8.32□□□□□ -1.08
UPK3A-201ENST00000216211 KRTAP9-6A0A140TA67 174 aa8.3□□□□□ -1.08
UPK3A-201ENST00000216211 XP32Q5T750 250 aa8.29□□□□□ -1.08
UPK3A-201ENST00000216211 LINC00643Q86TS7 51 aa8.28□□□□□ -1.08
UPK3A-201ENST00000216211 LINC00846Q9NV44 126 aa8.28□□□□□ -1.08
UPK3A-201ENST00000216211 IGLV8-61A0A075B6I0 122 aa8.27□□□□□ -1.09
UPK3A-201ENST00000216211 MT-ATP8P03928 68 aa8.27□□□□□ -1.09
UPK3A-201ENST00000216211 HRCT1Q6UXD1 115 aa8.27□□□□□ -1.09
UPK3A-201ENST00000216211 F8WEM9 126 aa8.26□□□□□ -1.09
UPK3A-201ENST00000216211 A0A1B0GW54 56 aa8.24□□□□□ -1.09
UPK3A-201ENST00000216211 LIMD2Q9BT23 127 aa8.23□□□□□ -1.09
UPK3A-201ENST00000216211 A0A1W2PNM2 257 aa8.21□□□□□ -1.1
UPK3A-201ENST00000216211 Q6JHZ5 121 aa8.21□□□□□ -1.1
UPK3A-201ENST00000216211 UBL5Q9BZL1 73 aa8.21□□□□□ -1.1
UPK3A-201ENST00000216211 TRBV7-7A0A0K0K1E9 115 aa8.2□□□□□ -1.1
UPK3A-201ENST00000216211 SCGB1A1P11684 91 aa8.2□□□□□ -1.1
UPK3A-201ENST00000216211 C9orf92A6NGG3 77 aa8.19□□□□□ -1.1
UPK3A-201ENST00000216211 Q6Q795 121 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 801.2 ms