RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 TYMSOSQ8TAI1 123 aa11.97□□□□□ -0.49
RHBDD3-201ENST00000216085 SPRR1BP22528 89 aa11.96□□□□□ -0.49
RHBDD3-201ENST00000216085 IGLV5-48A0A075B6I7 105 aa11.95□□□□□ -0.5
RHBDD3-201ENST00000216085 TCL1BO95988 128 aa11.95□□□□□ -0.5
RHBDD3-201ENST00000216085 GHRHP01286 108 aa11.95□□□□□ -0.5
RHBDD3-201ENST00000216085 KRTAP10-8P60410 259 aa11.95□□□□□ -0.5
RHBDD3-201ENST00000216085 F8W1H4 67 aa11.95□□□□□ -0.5
RHBDD3-201ENST00000216085 DNAL4O96015 105 aa11.95□□□□□ -0.5
RHBDD3-201ENST00000216085 MT1HL1P0DM35 61 aa11.95□□□□□ -0.5
RHBDD3-201ENST00000216085 LAMTOR3Q9UHA4 124 aa11.95□□□□□ -0.5
RHBDD3-201ENST00000216085 K7ERU9 68 aa11.94□□□□□ -0.5
RHBDD3-201ENST00000216085 FAM218AQ96MZ4 157 aa11.94□□□□□ -0.5
RHBDD3-201ENST00000216085 VPS25Q9BRG1 176 aa11.94□□□□□ -0.5
RHBDD3-201ENST00000216085 CLEC2BQ92478 149 aa11.93□□□□□ -0.5
RHBDD3-201ENST00000216085 IGLV9-49A0A0B4J1Y8 123 aa11.92□□□□□ -0.5
RHBDD3-201ENST00000216085 PPDPFLQ8WWR9 84 aa11.92□□□□□ -0.5
RHBDD3-201ENST00000216085 ATXN8Q156A1 80 aa11.91□□□□□ -0.5
RHBDD3-201ENST00000216085 KRTAP13-2Q52LG2 175 aa11.91□□□□□ -0.5
RHBDD3-201ENST00000216085 C9orf153Q5TBE3 101 aa11.9□□□□□ -0.51
RHBDD3-201ENST00000216085 C3orf22Q8N5N4 141 aa11.9□□□□□ -0.51
RHBDD3-201ENST00000216085 LINC01547P58512 204 aaPredicted RBP11.89□□□□□ -0.51
RHBDD3-201ENST00000216085 TNXBP22105 4242 aa11.88□□□□□ -0.51
RHBDD3-201ENST00000216085 MOBPQ13875 183 aa11.88□□□□□ -0.51
RHBDD3-201ENST00000216085 Q8N377 158 aa11.88□□□□□ -0.51
RHBDD3-201ENST00000216085 F8WEM9 126 aa11.87□□□□□ -0.51
RHBDD3-201ENST00000216085 PRO0461Q9UI25 63 aa11.87□□□□□ -0.51
RHBDD3-201ENST00000216085 Q8NBF4 154 aa11.87□□□□□ -0.51
RHBDD3-201ENST00000216085 H3BQ85 93 aa11.86□□□□□ -0.51
RHBDD3-201ENST00000216085 LST1O00453 97 aa11.86□□□□□ -0.51
RHBDD3-201ENST00000216085 TRACP01848 142 aa11.86□□□□□ -0.51
RHBDD3-201ENST00000216085 SSBP3-AS1Q7Z2R9 100 aa11.85□□□□□ -0.51
RHBDD3-201ENST00000216085 ORMDL1Q9P0S3 153 aa11.84□□□□□ -0.51
RHBDD3-201ENST00000216085 LINC00304Q8N9R0 145 aa11.83□□□□□ -0.52
RHBDD3-201ENST00000216085 C4orf48Q5BLP8 95 aa11.82□□□□□ -0.52
RHBDD3-201ENST00000216085 MTURNQ8N3F0 131 aa11.82□□□□□ -0.52
RHBDD3-201ENST00000216085 SMIM29Q86T20 159 aa11.82□□□□□ -0.52
RHBDD3-201ENST00000216085 C9JAW5 83 aa11.81□□□□□ -0.52
RHBDD3-201ENST00000216085 SPAG11AQ6PDA7 123 aa11.8□□□□□ -0.52
RHBDD3-201ENST00000216085 SMCPP49901 116 aaPredicted RBP11.79□□□□□ -0.52
RHBDD3-201ENST00000216085 TMEM256-PLSCR3K7ERE1 68 aa11.78□□□□□ -0.52
RHBDD3-201ENST00000216085 ETDBQ3ZM63 59 aa11.76□□□□□ -0.53
RHBDD3-201ENST00000216085 H3BT86 120 aa11.74□□□□□ -0.53
RHBDD3-201ENST00000216085 NDUFV3P56181 108 aaKnown RBP11.74□□□□□ -0.53
RHBDD3-201ENST00000216085 ANKRD29Q8N6D5 301 aa11.74□□□□□ -0.53
RHBDD3-201ENST00000216085 Q6JHZ5 121 aa11.73□□□□□ -0.53
RHBDD3-201ENST00000216085 TEN1Q86WV5 123 aa11.73□□□□□ -0.53
RHBDD3-201ENST00000216085 SPINK1P00995 79 aa11.72□□□□□ -0.53
RHBDD3-201ENST00000216085 SCGB1A1P11684 91 aa11.72□□□□□ -0.53
RHBDD3-201ENST00000216085 IGLV8-61A0A075B6I0 122 aa11.71□□□□□ -0.54
RHBDD3-201ENST00000216085 J3QR89 54 aa11.69□□□□□ -0.54
RHBDD3-201ENST00000216085 BAALC-AS2P0C853 105 aa11.69□□□□□ -0.54
RHBDD3-201ENST00000216085 HERC1Q15751 4861 aa11.68□□□□□ -0.54
RHBDD3-201ENST00000216085 CD164Q04900 197 aa11.67□□□□□ -0.54
RHBDD3-201ENST00000216085 RPS29P62273 56 aaKnown RBP11.67□□□□□ -0.54
RHBDD3-201ENST00000216085 HRCT1Q6UXD1 115 aa11.64□□□□□ -0.55
RHBDD3-201ENST00000216085 LIMD2Q9BT23 127 aa11.64□□□□□ -0.55
RHBDD3-201ENST00000216085 IGFL1Q6UW32 110 aa11.63□□□□□ -0.55
RHBDD3-201ENST00000216085 A0A1B0GV72 72 aa11.59□□□□□ -0.55
RHBDD3-201ENST00000216085 A0A0G2JQZ4 141 aa11.59□□□□□ -0.55
RHBDD3-201ENST00000216085 RBM3P98179 157 aaKnown RBP11.58□□□□□ -0.56
RHBDD3-201ENST00000216085 JMJD7-PLA2G4BH0Y9G9 81 aa11.57□□□□□ -0.56
RHBDD3-201ENST00000216085 SIGMAR1Q99720 223 aa11.57□□□□□ -0.56
RHBDD3-201ENST00000216085 DSCR8Q96T75 97 aa11.56□□□□□ -0.56
RHBDD3-201ENST00000216085 TRBV7-7A0A0K0K1E9 115 aa11.53□□□□□ -0.56
RHBDD3-201ENST00000216085 Q6Q795 121 aa11.53□□□□□ -0.56
RHBDD3-201ENST00000216085 PRR4Q16378 134 aa11.51□□□□□ -0.57
RHBDD3-201ENST00000216085 Q5XG85 94 aa11.51□□□□□ -0.57
RHBDD3-201ENST00000216085 RETNLBQ9BQ08 111 aa11.51□□□□□ -0.57
RHBDD3-201ENST00000216085 TRBV7-4A0A0J9YYF1 115 aa11.49□□□□□ -0.57
RHBDD3-201ENST00000216085 SVIPQ8NHG7 77 aa11.49□□□□□ -0.57
RHBDD3-201ENST00000216085 SS18L2Q9UHA2 77 aa11.49□□□□□ -0.57
RHBDD3-201ENST00000216085 CCKP06307 115 aa11.48□□□□□ -0.57
RHBDD3-201ENST00000216085 FP248Q71RG6 208 aaPredicted RBP11.48□□□□□ -0.57
RHBDD3-201ENST00000216085 PDE6GP18545 87 aa11.47□□□□□ -0.57
RHBDD3-201ENST00000216085 A0A1W2PNM2 257 aa11.44□□□□□ -0.58
RHBDD3-201ENST00000216085 OBSCN-AS1Q96MR7 158 aa11.44□□□□□ -0.58
RHBDD3-201ENST00000216085 A0A087WSZ3 146 aa11.43□□□□□ -0.58
RHBDD3-201ENST00000216085 LOC110117498A0A087WWA1 95 aa11.43□□□□□ -0.58
RHBDD3-201ENST00000216085 C14orf132Q9NPU4 83 aa11.42□□□□□ -0.58
RHBDD3-201ENST00000216085 FAM240AA0A1B0GVK7 77 aa11.41□□□□□ -0.58
RHBDD3-201ENST00000216085 ASB16-AS1Q495Z4 193 aa11.41□□□□□ -0.58
RHBDD3-201ENST00000216085 HMCN2Q8NDA2 5059 aa11.41□□□□□ -0.58
RHBDD3-201ENST00000216085 IGLV7-46A0A075B6I9 117 aa11.41□□□□□ -0.58
RHBDD3-201ENST00000216085 Q6ZQT0 140 aa11.39□□□□□ -0.59
RHBDD3-201ENST00000216085 ACYP1P07311 99 aa11.39□□□□□ -0.59
RHBDD3-201ENST00000216085 A0A1B0GW54 56 aa11.36□□□□□ -0.59
RHBDD3-201ENST00000216085 C1orf195Q5TG92 126 aa11.36□□□□□ -0.59
RHBDD3-201ENST00000216085 CDIP1Q9H305 208 aa11.36□□□□□ -0.59
RHBDD3-201ENST00000216085 TPRXLQ17RH7 258 aa11.31□□□□□ -0.6
RHBDD3-201ENST00000216085 KRTAP13-3Q3SY46 172 aa11.23□□□□□ -0.61
RHBDD3-201ENST00000216085 Q96NJ1 140 aa11.21□□□□□ -0.61
RHBDD3-201ENST00000216085 MT-ATP8P03928 68 aa11.21□□□□□ -0.62
RHBDD3-201ENST00000216085 IGKV4-1P06312 121 aa11.2□□□□□ -0.62
RHBDD3-201ENST00000216085 LRP2P98164 4655 aa11.2□□□□□ -0.62
RHBDD3-201ENST00000216085 LINC00472Q9H8W2 130 aa11.19□□□□□ -0.62
RHBDD3-201ENST00000216085 NREPQ16612 68 aa11.18□□□□□ -0.62
RHBDD3-201ENST00000216085 J3KT08 172 aa11.18□□□□□ -0.62
RHBDD3-201ENST00000216085 LINC00643Q86TS7 51 aa11.18□□□□□ -0.62
RHBDD3-201ENST00000216085 LPAP08519 4548 aa11.17□□□□□ -0.62
RHBDD3-201ENST00000216085 LINC00846Q9NV44 126 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms