RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 MT-ND4LP03901 98 aa4.19□□□□□ -1.74
SCARB2-226ENST00000640916 RPL37P61927 97 aaKnown RBP4.19□□□□□ -1.74
SCARB2-226ENST00000640916 NDUFA5Q16718 116 aa4.19□□□□□ -1.74
SCARB2-226ENST00000640916 TMEM218A2RU14 115 aa4.18□□□□□ -1.74
SCARB2-226ENST00000640916 IGLV6-57P01721 117 aa4.18□□□□□ -1.74
SCARB2-226ENST00000640916 MPLKIPQ8TAP9 179 aa4.18□□□□□ -1.74
SCARB2-226ENST00000640916 COX7B2Q8TF08 81 aa4.18□□□□□ -1.74
SCARB2-226ENST00000640916 PRELID3AQ96N28 172 aa4.18□□□□□ -1.74
SCARB2-226ENST00000640916 C2orf88Q9BSF0 95 aa4.18□□□□□ -1.74
SCARB2-226ENST00000640916 MAP1LC3AQ9H492 121 aa4.18□□□□□ -1.74
SCARB2-226ENST00000640916 SND1-IT1Q9HBX3 110 aa4.18□□□□□ -1.74
SCARB2-226ENST00000640916 IGIPA6NJ69 53 aa4.17□□□□□ -1.74
SCARB2-226ENST00000640916 S100A8P05109 93 aa4.17□□□□□ -1.74
SCARB2-226ENST00000640916 SPRR1AP35321 89 aa4.17□□□□□ -1.74
SCARB2-226ENST00000640916 KIAA1644Q3SXP7 199 aa4.17□□□□□ -1.74
SCARB2-226ENST00000640916 Q6Q795 121 aa4.17□□□□□ -1.74
SCARB2-226ENST00000640916 TMEM136Q6ZRR5 245 aa4.17□□□□□ -1.74
SCARB2-226ENST00000640916 ORMDL3Q8N138 153 aa4.17□□□□□ -1.74
SCARB2-226ENST00000640916 MUC12Q9UKN1 5478 aa4.16□□□□□ -1.74
SCARB2-226ENST00000640916 ERC2-IT1O76042 136 aa4.16□□□□□ -1.74
SCARB2-226ENST00000640916 PPBPP02775 128 aa4.16□□□□□ -1.74
SCARB2-226ENST00000640916 HERVK_113P63121 156 aa4.16□□□□□ -1.74
SCARB2-226ENST00000640916 ATP5L2Q7Z4Y8 100 aa4.16□□□□□ -1.74
SCARB2-226ENST00000640916 FAM240AA0A1B0GVK7 77 aa4.15□□□□□ -1.75
SCARB2-226ENST00000640916 LINC00614P0C842 121 aa4.15□□□□□ -1.75
SCARB2-226ENST00000640916 PFN2P35080 140 aa4.15□□□□□ -1.75
SCARB2-226ENST00000640916 Q6ZVH6 145 aa4.15□□□□□ -1.75
SCARB2-226ENST00000640916 RPS10P5Q9NQ39 176 aa4.15□□□□□ -1.75
SCARB2-226ENST00000640916 LINC00846Q9NV44 126 aa4.15□□□□□ -1.75
SCARB2-226ENST00000640916 SEC11CQ9BY50 192 aa4.14□□□□□ -1.75
SCARB2-226ENST00000640916 APOC3P02656 99 aa4.13□□□□□ -1.75
SCARB2-226ENST00000640916 SCGB1A1P11684 91 aa4.13□□□□□ -1.75
SCARB2-226ENST00000640916 SEC11AP67812 179 aa4.13□□□□□ -1.75
SCARB2-226ENST00000640916 E9PLD3 99 aa4.12□□□□□ -1.75
SCARB2-226ENST00000640916 S100PP25815 95 aa4.12□□□□□ -1.75
SCARB2-226ENST00000640916 KRTAP10-10P60014 251 aa4.12□□□□□ -1.75
SCARB2-226ENST00000640916 Q8N8P6 123 aa4.12□□□□□ -1.75
SCARB2-226ENST00000640916 TIMM17AQ99595 171 aa4.12□□□□□ -1.75
SCARB2-226ENST00000640916 PRO0628Q9UI54 55 aa4.12□□□□□ -1.75
SCARB2-226ENST00000640916 CYSLTR1Q9Y271 337 aa4.12□□□□□ -1.75
SCARB2-226ENST00000640916 IGLV5-39A0A0G2JS06 123 aa4.11□□□□□ -1.75
SCARB2-226ENST00000640916 SPINK8P0C7L1 97 aa4.11□□□□□ -1.75
SCARB2-226ENST00000640916 FABP9Q0Z7S8 132 aa4.11□□□□□ -1.75
SCARB2-226ENST00000640916 Q9BRP9 147 aa4.11□□□□□ -1.75
SCARB2-226ENST00000640916 KCNQ1DNQ9H478 68 aa4.11□□□□□ -1.75
SCARB2-226ENST00000640916 ERG28Q9UKR5 140 aa4.11□□□□□ -1.75
SCARB2-226ENST00000640916 TSTD3H0UI37 97 aa4.1□□□□□ -1.75
SCARB2-226ENST00000640916 RHEBQ15382 184 aa4.1□□□□□ -1.75
SCARB2-226ENST00000640916 C10orf91Q5T1B1 145 aa4.1□□□□□ -1.75
SCARB2-226ENST00000640916 PMCHL1Q16048 86 aa4.09□□□□□ -1.75
SCARB2-226ENST00000640916 ORMDL2Q53FV1 153 aa4.09□□□□□ -1.75
SCARB2-226ENST00000640916 C1orf195Q5TG92 126 aa4.09□□□□□ -1.75
SCARB2-226ENST00000640916 SIGMAR1Q99720 223 aa4.09□□□□□ -1.75
SCARB2-226ENST00000640916 LAMTOR2Q9Y2Q5 125 aa4.09□□□□□ -1.75
SCARB2-226ENST00000640916 TRAV9-1A0A075B6T8 112 aa4.08□□□□□ -1.76
SCARB2-226ENST00000640916 COX17Q14061 63 aa4.08□□□□□ -1.76
SCARB2-226ENST00000640916 C9orf153Q5TBE3 101 aa4.08□□□□□ -1.76
SCARB2-226ENST00000640916 HRCT1Q6UXD1 115 aa4.08□□□□□ -1.76
SCARB2-226ENST00000640916 SMIM20Q8N5G0 67 aa4.08□□□□□ -1.76
SCARB2-226ENST00000640916 SCGB3A1Q96QR1 104 aa4.08□□□□□ -1.76
SCARB2-226ENST00000640916 LIMD2Q9BT23 127 aa4.08□□□□□ -1.76
SCARB2-226ENST00000640916 NXT2Q9NPJ8 142 aaKnown RBP4.08□□□□□ -1.76
SCARB2-226ENST00000640916 TRAPPC1Q9Y5R8 145 aa4.08□□□□□ -1.76
SCARB2-226ENST00000640916 ETDCA0A1B0GVM5 59 aa4.07□□□□□ -1.76
SCARB2-226ENST00000640916 IGKV2-30P06310 120 aa4.07□□□□□ -1.76
SCARB2-226ENST00000640916 NDUFA6P56556 154 aa4.07□□□□□ -1.76
SCARB2-226ENST00000640916 FA2HQ7L5A8 372 aa4.07□□□□□ -1.76
SCARB2-226ENST00000640916 SVBPQ8N300 66 aa4.07□□□□□ -1.76
SCARB2-226ENST00000640916 ZNF625Q96I27 306 aaPredicted RBP4.07□□□□□ -1.76
SCARB2-226ENST00000640916 SMCO4Q9NRQ5 59 aa4.07□□□□□ -1.76
SCARB2-226ENST00000640916 C18orf32Q8TCD1 76 aa4.06□□□□□ -1.76
SCARB2-226ENST00000640916 TOMM6Q96B49 74 aa4.06□□□□□ -1.76
SCARB2-226ENST00000640916 TRBV10-3A0A0K0K1G6 114 aa4.05□□□□□ -1.76
SCARB2-226ENST00000640916 C20orf202A1L168 122 aa4.05□□□□□ -1.76
SCARB2-226ENST00000640916 LINC00587B1AMM8 73 aa4.05□□□□□ -1.76
SCARB2-226ENST00000640916 A0A096LNJ9 63 aa4.04□□□□□ -1.76
SCARB2-226ENST00000640916 NCR3O14931 201 aa4.04□□□□□ -1.76
SCARB2-226ENST00000640916 ST20-AS1Q8NBB2 130 aa4.04□□□□□ -1.76
SCARB2-226ENST00000640916 HIST1H4GQ99525 98 aa4.04□□□□□ -1.76
SCARB2-226ENST00000640916 CST9LQ9H4G1 147 aa4.04□□□□□ -1.76
SCARB2-226ENST00000640916 K7EMI3 77 aa4.03□□□□□ -1.76
SCARB2-226ENST00000640916 Q5XG85 94 aa4.03□□□□□ -1.76
SCARB2-226ENST00000640916 Q6ZRX8 168 aa4.03□□□□□ -1.76
SCARB2-226ENST00000640916 YPEL4Q96NS1 127 aa4.03□□□□□ -1.76
SCARB2-226ENST00000640916 LINC01546A6NGU7 62 aa4.02□□□□□ -1.77
SCARB2-226ENST00000640916 HBDP02042 147 aa4.02□□□□□ -1.77
SCARB2-226ENST00000640916 PMVKQ15126 192 aa4.02□□□□□ -1.77
SCARB2-226ENST00000640916 NOTCH2NLQ7Z3S9 236 aa4.02□□□□□ -1.77
SCARB2-226ENST00000640916 TRGC2P03986 189 aa4.01□□□□□ -1.77
SCARB2-226ENST00000640916 OR13C6PQ8NH95 151 aa4.01□□□□□ -1.77
SCARB2-226ENST00000640916 H7C2G1 150 aa4□□□□□ -1.77
SCARB2-226ENST00000640916 ZNF22P17026 224 aaPredicted RBP4□□□□□ -1.77
SCARB2-226ENST00000640916 SPRR1BP22528 89 aa4□□□□□ -1.77
SCARB2-226ENST00000640916 LINC00158P58513 81 aa4□□□□□ -1.77
SCARB2-226ENST00000640916 SMIM29Q86T20 159 aa4□□□□□ -1.77
SCARB2-226ENST00000640916 BAGE3Q86Y29 109 aa4□□□□□ -1.77
SCARB2-226ENST00000640916 PRAC1Q96KF2 57 aa4□□□□□ -1.77
SCARB2-226ENST00000640916 C11orf86A6NJI1 115 aa3.99□□□□□ -1.77
SCARB2-226ENST00000640916 C8orf87E5RJ46 101 aa3.99□□□□□ -1.77
SCARB2-226ENST00000640916 H3BRM9 83 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms