RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 ETDCA0A1B0GVM5 59 aa13.23□□□□□ -0.29
TSPAN9-208ENST00000640568 FXYD2P54710 66 aa13.23□□□□□ -0.29
TSPAN9-208ENST00000640568 ZNF73O43830 326 aaPredicted RBP13.22□□□□□ -0.29
TSPAN9-208ENST00000640568 SPRR1AP35321 89 aa13.22□□□□□ -0.29
TSPAN9-208ENST00000640568 RPL28P46779 137 aaKnown RBP13.22□□□□□ -0.29
TSPAN9-208ENST00000640568 HINT1P49773 126 aaPredicted RBP13.22□□□□□ -0.29
TSPAN9-208ENST00000640568 CTAG1AP78358 180 aa13.22□□□□□ -0.29
TSPAN9-208ENST00000640568 CFC1BP0CG36 223 aa13.21□□□□□ -0.3
TSPAN9-208ENST00000640568 CFC1P0CG37 223 aa13.21□□□□□ -0.3
TSPAN9-208ENST00000640568 A0A0B4J2C4 111 aa13.2□□□□□ -0.3
TSPAN9-208ENST00000640568 ZNF861PO60384 105 aa13.2□□□□□ -0.3
TSPAN9-208ENST00000640568 RPL13AP40429 203 aaKnown RBP13.2□□□□□ -0.3
TSPAN9-208ENST00000640568 DIRC1Q969H9 104 aa13.2□□□□□ -0.3
TSPAN9-208ENST00000640568 PRLHP81277 87 aa13.19□□□□□ -0.3
TSPAN9-208ENST00000640568 KRTAP4-5Q9BYR2 181 aa13.19□□□□□ -0.3
TSPAN9-208ENST00000640568 SPINK6Q6UWN8 80 aa13.18□□□□□ -0.3
TSPAN9-208ENST00000640568 NHP2Q9NX24 153 aaKnown RBP13.18□□□□□ -0.3
TSPAN9-208ENST00000640568 M0R143 59 aa13.16□□□□□ -0.3
TSPAN9-208ENST00000640568 INAFM2P0DMQ5 153 aa13.16□□□□□ -0.3
TSPAN9-208ENST00000640568 C6orf99Q4VX62 202 aa13.16□□□□□ -0.3
TSPAN9-208ENST00000640568 BVES-AS1Q5T3Y7 98 aa13.16□□□□□ -0.3
TSPAN9-208ENST00000640568 PKHD1L1Q86WI1 4243 aa13.15□□□□□ -0.3
TSPAN9-208ENST00000640568 KRTAP4-16G5E9R7 235 aaPredicted RBP13.15□□□□□ -0.3
TSPAN9-208ENST00000640568 H7C2G1 150 aa13.15□□□□□ -0.3
TSPAN9-208ENST00000640568 SMIM11BQ8TCY0 68 aa13.15□□□□□ -0.3
TSPAN9-208ENST00000640568 B5MCH6 92 aa13.14□□□□□ -0.31
TSPAN9-208ENST00000640568 PRO1854Q9UHT4 67 aa13.14□□□□□ -0.31
TSPAN9-208ENST00000640568 H0Y9J4 135 aa13.13□□□□□ -0.31
TSPAN9-208ENST00000640568 Q1RN00 199 aa13.13□□□□□ -0.31
TSPAN9-208ENST00000640568 KRTAP13-1Q8IUC0 172 aa13.13□□□□□ -0.31
TSPAN9-208ENST00000640568 HIGD2AQ9BW72 106 aa13.13□□□□□ -0.31
TSPAN9-208ENST00000640568 SRRM2Q9UQ35 2752 aaKnown RBP13.13□□□□□ -0.31
TSPAN9-208ENST00000640568 Q6ZRX8 168 aa13.12□□□□□ -0.31
TSPAN9-208ENST00000640568 COX7BP24311 80 aa13.1□□□□□ -0.31
TSPAN9-208ENST00000640568 K7ERJ3 54 aa13.1□□□□□ -0.31
TSPAN9-208ENST00000640568 VAMP3Q15836 100 aa13.09□□□□□ -0.31
TSPAN9-208ENST00000640568 TRBV7-6A0A0J9YX20 115 aa13.08□□□□□ -0.32
TSPAN9-208ENST00000640568 A0A1B0GWB2 263 aa13.08□□□□□ -0.32
TSPAN9-208ENST00000640568 ELOF1P60002 83 aaKnown RBP13.08□□□□□ -0.32
TSPAN9-208ENST00000640568 BATFQ16520 125 aa13.05□□□□□ -0.32
TSPAN9-208ENST00000640568 SMCR5Q8TEV8 140 aa13.04□□□□□ -0.32
TSPAN9-208ENST00000640568 Q9BRP9 147 aa13.04□□□□□ -0.32
TSPAN9-208ENST00000640568 ABCA13Q86UQ4 5058 aa13.04□□□□□ -0.32
TSPAN9-208ENST00000640568 DHRS4-AS1Q9P1J3 65 aa13.04□□□□□ -0.32
TSPAN9-208ENST00000640568 ZNF706Q9Y5V0 76 aaPredicted RBP13.01□□□□□ -0.33
TSPAN9-208ENST00000640568 SLC25A20O43772 301 aa12.99□□□□□ -0.33
TSPAN9-208ENST00000640568 PSMB2P49721 201 aa12.99□□□□□ -0.33
TSPAN9-208ENST00000640568 PCP4L1A6NKN8 68 aa12.98□□□□□ -0.33
TSPAN9-208ENST00000640568 TSPAN13O95857 204 aa12.98□□□□□ -0.33
TSPAN9-208ENST00000640568 ERC2-IT1O76042 136 aa12.97□□□□□ -0.33
TSPAN9-208ENST00000640568 FLG2Q5D862 2391 aaPredicted RBP12.97□□□□□ -0.33
TSPAN9-208ENST00000640568 FAT3Q8TDW7 4589 aa12.96□□□□□ -0.34
TSPAN9-208ENST00000640568 H0YGX0 51 aa12.96□□□□□ -0.34
TSPAN9-208ENST00000640568 TRIAP1O43715 76 aa12.95□□□□□ -0.34
TSPAN9-208ENST00000640568 COX6CP09669 75 aa12.95□□□□□ -0.34
TSPAN9-208ENST00000640568 SPRR4Q96PI1 79 aa12.94□□□□□ -0.34
TSPAN9-208ENST00000640568 LINC00575Q6W349 94 aa12.93□□□□□ -0.34
TSPAN9-208ENST00000640568 hADV29S1A0JD25 119 aa12.92□□□□□ -0.34
TSPAN9-208ENST00000640568 SNCGO76070 127 aa12.92□□□□□ -0.34
TSPAN9-208ENST00000640568 KRTAP1-4P0C5Y4 121 aa12.92□□□□□ -0.34
TSPAN9-208ENST00000640568 LRP1Q07954 4544 aaKnown RBP12.92□□□□□ -0.34
TSPAN9-208ENST00000640568 GAGE2AQ6NT46 116 aa12.91□□□□□ -0.34
TSPAN9-208ENST00000640568 MYCBP2O75592 4640 aa12.91□□□□□ -0.34
TSPAN9-208ENST00000640568 OXTP01178 125 aa12.91□□□□□ -0.34
TSPAN9-208ENST00000640568 ST20-AS1Q8NBB2 130 aa12.9□□□□□ -0.34
TSPAN9-208ENST00000640568 SCGB1C2P0DMR2 95 aa12.89□□□□□ -0.35
TSPAN9-208ENST00000640568 LINC01600Q96MT4 127 aa12.89□□□□□ -0.35
TSPAN9-208ENST00000640568 ANAPC11Q9NYG5 84 aa12.89□□□□□ -0.35
TSPAN9-208ENST00000640568 SNHG12Q9BXW3 62 aa12.87□□□□□ -0.35
TSPAN9-208ENST00000640568 KRTAP29-1A8MX34 341 aaPredicted RBP12.86□□□□□ -0.35
TSPAN9-208ENST00000640568 CRYGAP11844 174 aa12.86□□□□□ -0.35
TSPAN9-208ENST00000640568 FAM229BQ4G0N7 80 aa12.86□□□□□ -0.35
TSPAN9-208ENST00000640568 DEFB105AQ8NG35 78 aa12.85□□□□□ -0.35
TSPAN9-208ENST00000640568 PRR26Q8N8Z3 221 aa12.85□□□□□ -0.35
TSPAN9-208ENST00000640568 CLEC2BQ92478 149 aa12.85□□□□□ -0.35
TSPAN9-208ENST00000640568 FAM218AQ96MZ4 157 aa12.85□□□□□ -0.35
TSPAN9-208ENST00000640568 A0A1B0GX51 115 aa12.84□□□□□ -0.35
TSPAN9-208ENST00000640568 LINC00483Q53H64 154 aa12.84□□□□□ -0.35
TSPAN9-208ENST00000640568 Q6ZQY7 126 aa12.84□□□□□ -0.35
TSPAN9-208ENST00000640568 NAA38Q9BRA0 125 aaKnown RBP12.84□□□□□ -0.35
TSPAN9-208ENST00000640568 J3QL48 77 aa12.83□□□□□ -0.36
TSPAN9-208ENST00000640568 A0A087X002 238 aa12.82□□□□□ -0.36
TSPAN9-208ENST00000640568 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.82□□□□□ -0.36
TSPAN9-208ENST00000640568 TEX49A0A1B0GTD5 131 aa12.81□□□□□ -0.36
TSPAN9-208ENST00000640568 PCLOQ9Y6V0 5065 aa12.81□□□□□ -0.36
TSPAN9-208ENST00000640568 DNAL4O96015 105 aa12.8□□□□□ -0.36
TSPAN9-208ENST00000640568 LYRM7Q5U5X0 104 aa12.8□□□□□ -0.36
TSPAN9-208ENST00000640568 H3BUT2 72 aa12.79□□□□□ -0.36
TSPAN9-208ENST00000640568 COL5A1-AS1Q5SY13 56 aa12.79□□□□□ -0.36
TSPAN9-208ENST00000640568 IGLV5-48A0A075B6I7 105 aa12.78□□□□□ -0.36
TSPAN9-208ENST00000640568 TAX1BP3O14907 124 aa12.78□□□□□ -0.36
TSPAN9-208ENST00000640568 SPRR1BP22528 89 aa12.78□□□□□ -0.36
TSPAN9-208ENST00000640568 C9orf118A6NHY6 69 aa12.78□□□□□ -0.36
TSPAN9-208ENST00000640568 TYMSOSQ8TAI1 123 aa12.78□□□□□ -0.36
TSPAN9-208ENST00000640568 LAMTOR3Q9UHA4 124 aa12.77□□□□□ -0.37
TSPAN9-208ENST00000640568 TNXBP22105 4242 aa12.76□□□□□ -0.37
TSPAN9-208ENST00000640568 IGLV9-49A0A0B4J1Y8 123 aa12.76□□□□□ -0.37
TSPAN9-208ENST00000640568 LINC01547P58512 204 aaPredicted RBP12.76□□□□□ -0.37
TSPAN9-208ENST00000640568 OCIAD2Q56VL3 154 aa12.76□□□□□ -0.37
TSPAN9-208ENST00000640568 GHRHP01286 108 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms