RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 ATP5EP56381 51 aaPredicted RBP13.57□□□□□ -0.24
PMS1-222ENST00000639501 LINC00528Q8N1L1 170 aa13.56□□□□□ -0.24
PMS1-222ENST00000639501 C3orf84H3BNL1 204 aa13.55□□□□□ -0.24
PMS1-222ENST00000639501 A0A0U1RQV1 116 aa13.54□□□□□ -0.24
PMS1-222ENST00000639501 PKIGQ9Y2B9 76 aa13.54□□□□□ -0.24
PMS1-222ENST00000639501 PRYO14603 147 aa13.54□□□□□ -0.24
PMS1-222ENST00000639501 ERC2-IT1O76042 136 aa13.54□□□□□ -0.24
PMS1-222ENST00000639501 MPLKIPQ8TAP9 179 aa13.53□□□□□ -0.24
PMS1-222ENST00000639501 HIGD2AQ9BW72 106 aa13.51□□□□□ -0.25
PMS1-222ENST00000639501 CAMK2N2Q96S95 79 aa13.51□□□□□ -0.25
PMS1-222ENST00000639501 Q8NAQ8 132 aa13.5□□□□□ -0.25
PMS1-222ENST00000639501 BRK1Q8WUW1 75 aa13.5□□□□□ -0.25
PMS1-222ENST00000639501 M0R378 163 aa13.5□□□□□ -0.25
PMS1-222ENST00000639501 Q6ZRU5 148 aa13.5□□□□□ -0.25
PMS1-222ENST00000639501 Q6ZTC4 211 aa13.47□□□□□ -0.25
PMS1-222ENST00000639501 FUSP35637 526 aaKnown RBP eCLIP13.46□□□□□ -0.25
PMS1-222ENST00000639501 DEFB105AQ8NG35 78 aa13.45□□□□□ -0.26
PMS1-222ENST00000639501 FBN1P35555 2871 aaKnown RBP13.44□□□□□ -0.26
PMS1-222ENST00000639501 WFDC10BQ8IUB3 73 aa13.44□□□□□ -0.26
PMS1-222ENST00000639501 EGFEM1PQ0D2K5 195 aa13.43□□□□□ -0.26
PMS1-222ENST00000639501 KRTAP26-1Q6PEX3 210 aa13.43□□□□□ -0.26
PMS1-222ENST00000639501 SMIM29Q86T20 159 aa13.43□□□□□ -0.26
PMS1-222ENST00000639501 C15orf56Q8N910 161 aa13.43□□□□□ -0.26
PMS1-222ENST00000639501 Q6ZRP5 223 aa13.43□□□□□ -0.26
PMS1-222ENST00000639501 ESRGQ1W209 222 aa13.42□□□□□ -0.26
PMS1-222ENST00000639501 FAM30AQ9NZY2 134 aa13.42□□□□□ -0.26
PMS1-222ENST00000639501 Q8N377 158 aa13.42□□□□□ -0.26
PMS1-222ENST00000639501 SPART-AS1P0CW21 52 aa13.4□□□□□ -0.26
PMS1-222ENST00000639501 APOC4P55056 127 aa13.38□□□□□ -0.27
PMS1-222ENST00000639501 TRRAPQ9Y4A5 3859 aa13.37□□□□□ -0.27
PMS1-222ENST00000639501 STAB1Q9NY15 2570 aa13.37□□□□□ -0.27
PMS1-222ENST00000639501 KPRPQ5T749 579 aaPredicted RBP13.37□□□□□ -0.27
PMS1-222ENST00000639501 PKD1L1Q8TDX9 2849 aa13.37□□□□□ -0.27
PMS1-222ENST00000639501 IGLV5-48A0A075B6I7 105 aa13.35□□□□□ -0.27
PMS1-222ENST00000639501 SERTAD4-AS1Q5TG53 156 aa13.35□□□□□ -0.27
PMS1-222ENST00000639501 A0A1W2PNM2 257 aa13.35□□□□□ -0.27
PMS1-222ENST00000639501 COL6A5A8TX70 2615 aa13.33□□□□□ -0.27
PMS1-222ENST00000639501 KRTAP24-1Q3LI83 254 aa13.33□□□□□ -0.28
PMS1-222ENST00000639501 LRCOL1A6NCL2 159 aa13.32□□□□□ -0.28
PMS1-222ENST00000639501 C7orf33Q8WU49 177 aa13.32□□□□□ -0.28
PMS1-222ENST00000639501 KCNQ1DNQ9H478 68 aa13.32□□□□□ -0.28
PMS1-222ENST00000639501 LCE6AA0A183 80 aa13.3□□□□□ -0.28
PMS1-222ENST00000639501 hDV103S1A0JD37 113 aa13.3□□□□□ -0.28
PMS1-222ENST00000639501 Q9BRP9 147 aa13.29□□□□□ -0.28
PMS1-222ENST00000639501 NKAPP1Q8N9T2 125 aa13.28□□□□□ -0.28
PMS1-222ENST00000639501 ST20-AS1Q8NBB2 130 aa13.28□□□□□ -0.28
PMS1-222ENST00000639501 RPL37AP8A6NKH3 93 aa13.26□□□□□ -0.29
PMS1-222ENST00000639501 TNP2Q05952 138 aa13.26□□□□□ -0.29
PMS1-222ENST00000639501 C1orf195Q5TG92 126 aa13.26□□□□□ -0.29
PMS1-222ENST00000639501 DSCR10P59022 87 aa13.26□□□□□ -0.29
PMS1-222ENST00000639501 C1orf137Q5JT78 98 aa13.26□□□□□ -0.29
PMS1-222ENST00000639501 C1orf64Q8NEQ6 169 aa13.25□□□□□ -0.29
PMS1-222ENST00000639501 K7EQZ3 153 aa13.24□□□□□ -0.29
PMS1-222ENST00000639501 ZCCHC13Q8WW36 166 aaKnown RBP13.24□□□□□ -0.29
PMS1-222ENST00000639501 SYCNQ0VAF6 134 aa13.23□□□□□ -0.29
PMS1-222ENST00000639501 Q6ZRX8 168 aa13.23□□□□□ -0.29
PMS1-222ENST00000639501 FAM168BA1KXE4 195 aa13.22□□□□□ -0.29
PMS1-222ENST00000639501 Q8NBF4 154 aa13.22□□□□□ -0.29
PMS1-222ENST00000639501 IGKV2D-24A0A075B6R9 120 aa13.22□□□□□ -0.29
PMS1-222ENST00000639501 KRTAP4-16G5E9R7 235 aaPredicted RBP13.21□□□□□ -0.29
PMS1-222ENST00000639501 RETNQ9HD89 108 aa13.2□□□□□ -0.3
PMS1-222ENST00000639501 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.19□□□□□ -0.3
PMS1-222ENST00000639501 PRR4Q16378 134 aa13.19□□□□□ -0.3
PMS1-222ENST00000639501 ETDCA0A1B0GVM5 59 aa13.18□□□□□ -0.3
PMS1-222ENST00000639501 DHRS4-AS1Q9P1J3 65 aa13.18□□□□□ -0.3
PMS1-222ENST00000639501 A0A0G2JQZ4 141 aa13.17□□□□□ -0.3
PMS1-222ENST00000639501 A0A1W2PNN7 141 aa13.17□□□□□ -0.3
PMS1-222ENST00000639501 SPRR4Q96PI1 79 aa13.17□□□□□ -0.3
PMS1-222ENST00000639501 KRTAP7-1Q8IUC3 87 aa13.15□□□□□ -0.3
PMS1-222ENST00000639501 A0A1B0GW54 56 aa13.14□□□□□ -0.31
PMS1-222ENST00000639501 IGLV1-50A0A075B6I6 118 aa13.13□□□□□ -0.31
PMS1-222ENST00000639501 F8WDY8 70 aa13.13□□□□□ -0.31
PMS1-222ENST00000639501 Q1T7F1 81 aa13.13□□□□□ -0.31
PMS1-222ENST00000639501 ANK2Q01484 3957 aa13.13□□□□□ -0.31
PMS1-222ENST00000639501 SPRR1AP35321 89 aa13.12□□□□□ -0.31
PMS1-222ENST00000639501 PSPHP1O15172 72 aa13.12□□□□□ -0.31
PMS1-222ENST00000639501 PRB2P02812 416 aaPredicted RBP13.12□□□□□ -0.31
PMS1-222ENST00000639501 V9GYY9 64 aa13.11□□□□□ -0.31
PMS1-222ENST00000639501 TENM3Q9P273 2699 aa13.11□□□□□ -0.31
PMS1-222ENST00000639501 H3BNG1 76 aa13.1□□□□□ -0.31
PMS1-222ENST00000639501 DEFB116Q30KQ4 102 aa13.1□□□□□ -0.31
PMS1-222ENST00000639501 HCG22E2RYF7 251 aa13.09□□□□□ -0.31
PMS1-222ENST00000639501 LINC01556Q5JQF7 62 aa13.08□□□□□ -0.32
PMS1-222ENST00000639501 CMYA5Q8N3K9 4069 aa13.08□□□□□ -0.32
PMS1-222ENST00000639501 CASC10Q5T4H9 136 aa13.07□□□□□ -0.32
PMS1-222ENST00000639501 TRAV22A0A0B4J277 110 aa13.07□□□□□ -0.32
PMS1-222ENST00000639501 PSCAO43653 123 aa13.07□□□□□ -0.32
PMS1-222ENST00000639501 PRR15Q8IV56 129 aa13.07□□□□□ -0.32
PMS1-222ENST00000639501 LINC00476Q8WZB0 136 aa13.06□□□□□ -0.32
PMS1-222ENST00000639501 PLA2G2DQ9UNK4 145 aa13.06□□□□□ -0.32
PMS1-222ENST00000639501 TLX1NBP0CAT3 122 aa13.05□□□□□ -0.32
PMS1-222ENST00000639501 DNAH1Q9P2D7 4330 aa13.05□□□□□ -0.32
PMS1-222ENST00000639501 UBE2BP63146 152 aa13.05□□□□□ -0.32
PMS1-222ENST00000639501 CYP4F30PQ9H0H9 118 aa13.05□□□□□ -0.32
PMS1-222ENST00000639501 WFDC13Q8IUB5 93 aa13.04□□□□□ -0.32
PMS1-222ENST00000639501 IGLV5-37A0A075B6J1 123 aa13.03□□□□□ -0.32
PMS1-222ENST00000639501 NOTCH1P46531 2555 aa13.02□□□□□ -0.32
PMS1-222ENST00000639501 OXLD1Q5BKU9 147 aa13.01□□□□□ -0.33
PMS1-222ENST00000639501 MDFIQ99750 246 aa13□□□□□ -0.33
PMS1-222ENST00000639501 IGFL1Q6UW32 110 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms