RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 MUSTN1Q8IVN3 82 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 TMEM35BQ8NCS4 154 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 C1orf54Q8WWF1 131 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 COPS9Q8WXC6 57 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 ATP6V1G3Q96LB4 118 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 CEP19Q96LK0 163 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 PPP3R2Q96LZ3 170 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 CCDC115Q96NT0 180 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 C20orf78Q9BR46 151 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 SPANXDQ9BXN6 97 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 FAM107BQ9H098 131 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 NKIRAS1Q9NYS0 192 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 C6orf48Q9UBA6 75 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 PRO1854Q9UHT4 67 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 MED31Q9Y3C7 131 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 PIK3C2AO00443 1686 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 ZNF831Q5JPB2 1677 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 PBRM1Q86U86 1689 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 CCDC144AA2RUR9 1427 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 EEA1Q15075 1411 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 SMARCA2P51531 1590 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 DNMBPQ6XZF7 1577 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 MARF1Q9Y4F3 1742 aaKnown RBP-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 ASPMQ8IZT6 3477 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 ADGRL2O95490 1459 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 NCOA2Q15596 1464 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 LRRC9Q6ZRR7 1453 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 MRC2Q9UBG0 1479 aa-0.41□□□□□ -2.48
CCDC7-211ENST00000638889 CCNB3Q8WWL7 1395 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 LRRC7Q96NW7 1537 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 TET3O43151 1660 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 USP54Q70EL1 1684 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 KIF21AQ7Z4S6 1674 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 RIMS1Q86UR5 1692 aaKnown RBP-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 PSME4Q14997 1843 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 PARP14Q460N5 1801 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 TRBV25-1A0A075B6N4 114 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 DEFB131BA0A096LNP1 70 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 A0A1B0GUT8 65 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 OOSP1A8MZH6 123 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 J3QR89 54 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 K7ERU9 68 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 CYB5AP00167 134 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 CD52P31358 61 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 IFI27P40305 119 aaPredicted RBP-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 POLR2KP53803 58 aaKnown RBP-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 GNG3P63215 75 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 Q0VG73 95 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 CATR1Q13166 79 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 HMGN3Q15651 99 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 PMCHL1Q16048 86 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 DEFB133Q30KQ1 61 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 KRTAP19-2Q3LHN2 52 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 ALKAL2Q6UX46 152 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 ZNF720Q7Z2F6 126 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 SMIM20Q8N5G0 67 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 PRAP1Q96NZ9 151 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 CGREF1Q99674 301 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 PDCD10Q9BUL8 212 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 DPY30Q9C005 99 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 DPH3P1Q9H4G8 78 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 RERGLQ9H628 205 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 LINC00474Q9P2X8 69 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 KAAG1Q9UBP8 84 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 HIGD1AQ9Y241 93 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 OVOS2A0A0G2JMS6 1433 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 CPSF1Q10570 1443 aaKnown RBP-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 UACAQ9BZF9 1416 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 LRRC37AA6NMS7 1700 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 XRN1Q8IZH2 1706 aaKnown RBP-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 DNAH12Q6ZR08 3092 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 CD163L1Q9NR16 1453 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 TMEM131LA2VDJ0 1609 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 DEPDC5O75140 1603 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 USP32Q8NFA0 1604 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 ANKRD36A6QL64 1941 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 MYH2Q9UKX2 1941 aa-0.42□□□□□ -2.48
CCDC7-211ENST00000638889 KIF1BO60333 1816 aa-0.43□□□□□ -2.48
CCDC7-211ENST00000638889 EHBP1L1Q8N3D4 1523 aa-0.43□□□□□ -2.48
CCDC7-211ENST00000638889 UNC80Q8N2C7 3258 aa-0.43□□□□□ -2.48
CCDC7-211ENST00000638889 TOGARAM1Q9Y4F4 1720 aa-0.43□□□□□ -2.48
CCDC7-211ENST00000638889 SAMD9Q5K651 1589 aa-0.43□□□□□ -2.48
CCDC7-211ENST00000638889 SCAPERQ9BY12 1400 aa-0.43□□□□□ -2.48
CCDC7-211ENST00000638889 A0A1W2PRE2 83 aa-0.43□□□□□ -2.48
CCDC7-211ENST00000638889 SMIM27A0A1W2PRY6 76 aa-0.43□□□□□ -2.48
CCDC7-211ENST00000638889 M0R2Z0 102 aa-0.43□□□□□ -2.48
CCDC7-211ENST00000638889 NDUFA4O00483 81 aa-0.43□□□□□ -2.48
CCDC7-211ENST00000638889 UQCRHP07919 91 aa-0.43□□□□□ -2.48
CCDC7-211ENST00000638889 SCTP09683 121 aa-0.43□□□□□ -2.48
CCDC7-211ENST00000638889 LINC00032P0C843 101 aa-0.43□□□□□ -2.48
CCDC7-211ENST00000638889 KRTDAPP60985 99 aa-0.43□□□□□ -2.48
CCDC7-211ENST00000638889 LSM6P62312 80 aaKnown RBP-0.43□□□□□ -2.48
CCDC7-211ENST00000638889 SARNPP82979 210 aaKnown RBP-0.43□□□□□ -2.48
CCDC7-211ENST00000638889 SMCO1Q147U7 214 aa-0.43□□□□□ -2.48
CCDC7-211ENST00000638889 PLGLAQ15195 96 aa-0.43□□□□□ -2.48
CCDC7-211ENST00000638889 ETDBQ3ZM63 59 aa-0.43□□□□□ -2.48
CCDC7-211ENST00000638889 NCBP2-AS2Q69YL0 99 aa-0.43□□□□□ -2.48
CCDC7-211ENST00000638889 RPL13AP3Q6NVV1 102 aa-0.43□□□□□ -2.48
CCDC7-211ENST00000638889 C8orf59Q8N0T1 100 aaPredicted RBP-0.43□□□□□ -2.48
CCDC7-211ENST00000638889 SMIM3Q9BZL3 60 aa-0.43□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms