RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 TRRAPQ9Y4A5 3859 aa7.14□□□□□ -1.27
SNIP1-204ENST00000638725 SERTAD4-AS1Q5TG53 156 aa7.14□□□□□ -1.27
SNIP1-204ENST00000638725 NDUFC1O43677 76 aa7.13□□□□□ -1.27
SNIP1-204ENST00000638725 Q8N377 158 aa7.13□□□□□ -1.27
SNIP1-204ENST00000638725 SYCNQ0VAF6 134 aa7.13□□□□□ -1.27
SNIP1-204ENST00000638725 NKAPP1Q8N9T2 125 aa7.13□□□□□ -1.27
SNIP1-204ENST00000638725 H3BNG1 76 aa7.12□□□□□ -1.27
SNIP1-204ENST00000638725 FP248Q71RG6 208 aaPredicted RBP7.12□□□□□ -1.27
SNIP1-204ENST00000638725 C7orf33Q8WU49 177 aa7.12□□□□□ -1.27
SNIP1-204ENST00000638725 KCNQ1DNQ9H478 68 aa7.12□□□□□ -1.27
SNIP1-204ENST00000638725 OCR1Q9BZK8 76 aa7.11□□□□□ -1.27
SNIP1-204ENST00000638725 SMIM26A0A096LP01 95 aa7.1□□□□□ -1.27
SNIP1-204ENST00000638725 J3QKU1 62 aa7.1□□□□□ -1.27
SNIP1-204ENST00000638725 ERC2-IT1O76042 136 aa7.1□□□□□ -1.27
SNIP1-204ENST00000638725 LINC00474Q9P2X8 69 aa7.1□□□□□ -1.27
SNIP1-204ENST00000638725 ATRQ13535 2644 aa7.09□□□□□ -1.27
SNIP1-204ENST00000638725 IGLV5-48A0A075B6I7 105 aa7.09□□□□□ -1.27
SNIP1-204ENST00000638725 RPL37AP8A6NKH3 93 aa7.09□□□□□ -1.27
SNIP1-204ENST00000638725 LINC01556Q5JQF7 62 aa7.08□□□□□ -1.28
SNIP1-204ENST00000638725 PKD1L1Q8TDX9 2849 aa7.08□□□□□ -1.28
SNIP1-204ENST00000638725 HELZ2Q9BYK8 2649 aaKnown RBP7.08□□□□□ -1.28
SNIP1-204ENST00000638725 OTOGQ6ZRI0 2925 aa7.08□□□□□ -1.28
SNIP1-204ENST00000638725 A0A0U1RQV1 116 aa7.08□□□□□ -1.28
SNIP1-204ENST00000638725 PRYO14603 147 aa7.08□□□□□ -1.28
SNIP1-204ENST00000638725 ATP5EP56381 51 aaPredicted RBP7.08□□□□□ -1.28
SNIP1-204ENST00000638725 OXLD1Q5BKU9 147 aa7.08□□□□□ -1.28
SNIP1-204ENST00000638725 LINC00336Q6ZUF6 198 aa7.08□□□□□ -1.28
SNIP1-204ENST00000638725 Q9BRP9 147 aa7.08□□□□□ -1.28
SNIP1-204ENST00000638725 A0A1W2PNM2 257 aa7.07□□□□□ -1.28
SNIP1-204ENST00000638725 FAM168BA1KXE4 195 aa7.07□□□□□ -1.28
SNIP1-204ENST00000638725 Q6ZRX8 168 aa7.07□□□□□ -1.28
SNIP1-204ENST00000638725 HIGD2AQ9BW72 106 aa7.07□□□□□ -1.28
SNIP1-204ENST00000638725 PRO0628Q9UI54 55 aa7.07□□□□□ -1.28
SNIP1-204ENST00000638725 F8WDY8 70 aa7.06□□□□□ -1.28
SNIP1-204ENST00000638725 SMIM29Q86T20 159 aa7.06□□□□□ -1.28
SNIP1-204ENST00000638725 ST20-AS1Q8NBB2 130 aa7.06□□□□□ -1.28
SNIP1-204ENST00000638725 FUSP35637 526 aaKnown RBP eCLIP7.06□□□□□ -1.28
SNIP1-204ENST00000638725 KRTAP10-11P60412 298 aa7.05□□□□□ -1.28
SNIP1-204ENST00000638725 FAM229BQ4G0N7 80 aa7.05□□□□□ -1.28
SNIP1-204ENST00000638725 FAM30AQ9NZY2 134 aa7.05□□□□□ -1.28
SNIP1-204ENST00000638725 TEP1Q99973 2627 aaKnown RBP7.05□□□□□ -1.28
SNIP1-204ENST00000638725 NSD1Q96L73 2696 aaPredicted RBP7.05□□□□□ -1.28
SNIP1-204ENST00000638725 DEFB131BA0A096LNP1 70 aa7.05□□□□□ -1.28
SNIP1-204ENST00000638725 KRTAP4-16G5E9R7 235 aaPredicted RBP7.05□□□□□ -1.28
SNIP1-204ENST00000638725 DHRS4-AS1Q9P1J3 65 aa7.05□□□□□ -1.28
SNIP1-204ENST00000638725 TNP2Q05952 138 aa7.04□□□□□ -1.28
SNIP1-204ENST00000638725 C1orf137Q5JT78 98 aa7.04□□□□□ -1.28
SNIP1-204ENST00000638725 ETDCA0A1B0GVM5 59 aa7.04□□□□□ -1.28
SNIP1-204ENST00000638725 IGLV1-50A0A075B6I6 118 aa7.03□□□□□ -1.28
SNIP1-204ENST00000638725 CASC10Q5T4H9 136 aa7.03□□□□□ -1.28
SNIP1-204ENST00000638725 KRTAP7-1Q8IUC3 87 aa7.03□□□□□ -1.28
SNIP1-204ENST00000638725 TLX1NBP0CAT3 122 aa7.03□□□□□ -1.28
SNIP1-204ENST00000638725 Q8NBF4 154 aa7.02□□□□□ -1.29
SNIP1-204ENST00000638725 PLA2G2DQ9UNK4 145 aa7.02□□□□□ -1.29
SNIP1-204ENST00000638725 SPRR1AP35321 89 aa7.02□□□□□ -1.29
SNIP1-204ENST00000638725 DNAH10OSP0CZ25 163 aa7.01□□□□□ -1.29
SNIP1-204ENST00000638725 TENM3Q9P273 2699 aa7.01□□□□□ -1.29
SNIP1-204ENST00000638725 HECTD1Q9ULT8 2610 aa7.01□□□□□ -1.29
SNIP1-204ENST00000638725 C11orf45Q8TAV5 145 aa7.01□□□□□ -1.29
SNIP1-204ENST00000638725 MPLKIPQ8TAP9 179 aa7□□□□□ -1.29
SNIP1-204ENST00000638725 IGLV5-37A0A075B6J1 123 aa7□□□□□ -1.29
SNIP1-204ENST00000638725 A0A1B0GW54 56 aa7□□□□□ -1.29
SNIP1-204ENST00000638725 DSCR10P59022 87 aa6.99□□□□□ -1.29
SNIP1-204ENST00000638725 K7EQZ3 153 aa6.99□□□□□ -1.29
SNIP1-204ENST00000638725 UBE2BP63146 152 aa6.99□□□□□ -1.29
SNIP1-204ENST00000638725 SPRR4Q96PI1 79 aa6.99□□□□□ -1.29
SNIP1-204ENST00000638725 A0A0G2JQZ4 141 aa6.97□□□□□ -1.29
SNIP1-204ENST00000638725 A0A1W2PNN7 141 aa6.97□□□□□ -1.29
SNIP1-204ENST00000638725 MRPL55Q7Z7F7 128 aaKnown RBP6.97□□□□□ -1.29
SNIP1-204ENST00000638725 LCE6AA0A183 80 aa6.97□□□□□ -1.29
SNIP1-204ENST00000638725 LINC00588Q9Y4M8 146 aa6.97□□□□□ -1.29
SNIP1-204ENST00000638725 ANK2Q01484 3957 aa6.96□□□□□ -1.3
SNIP1-204ENST00000638725 LINC00476Q8WZB0 136 aa6.95□□□□□ -1.3
SNIP1-204ENST00000638725 BRK1Q8WUW1 75 aa6.95□□□□□ -1.3
SNIP1-204ENST00000638725 PKIGQ9Y2B9 76 aa6.95□□□□□ -1.3
SNIP1-204ENST00000638725 REG3GQ6UW15 175 aa6.94□□□□□ -1.3
SNIP1-204ENST00000638725 DEFB116Q30KQ4 102 aa6.93□□□□□ -1.3
SNIP1-204ENST00000638725 ZCCHC13Q8WW36 166 aaKnown RBP6.93□□□□□ -1.3
SNIP1-204ENST00000638725 DNAH1Q9P2D7 4330 aa6.92□□□□□ -1.3
SNIP1-204ENST00000638725 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.92□□□□□ -1.3
SNIP1-204ENST00000638725 HCG22E2RYF7 251 aa6.92□□□□□ -1.3
SNIP1-204ENST00000638725 PSCAO43653 123 aa6.92□□□□□ -1.3
SNIP1-204ENST00000638725 IGFL1Q6UW32 110 aa6.92□□□□□ -1.3
SNIP1-204ENST00000638725 hDV103S1A0JD37 113 aa6.91□□□□□ -1.3
SNIP1-204ENST00000638725 LRCOL1A6NCL2 159 aa6.91□□□□□ -1.3
SNIP1-204ENST00000638725 F8P00451 2351 aa6.91□□□□□ -1.3
SNIP1-204ENST00000638725 PRLHP81277 87 aa6.9□□□□□ -1.3
SNIP1-204ENST00000638725 C1orf64Q8NEQ6 169 aa6.9□□□□□ -1.3
SNIP1-204ENST00000638725 WFDC13Q8IUB5 93 aa6.89□□□□□ -1.31
SNIP1-204ENST00000638725 PRR4Q16378 134 aa6.89□□□□□ -1.31
SNIP1-204ENST00000638725 KMT2BQ9UMN6 2715 aaPredicted RBP6.88□□□□□ -1.31
SNIP1-204ENST00000638725 A0A087WSZ3 146 aa6.88□□□□□ -1.31
SNIP1-204ENST00000638725 IGKV2-24A0A0C4DH68 120 aa6.88□□□□□ -1.31
SNIP1-204ENST00000638725 FLNBO75369 2602 aaKnown RBP6.88□□□□□ -1.31
SNIP1-204ENST00000638725 A0A096LNI7 61 aa6.87□□□□□ -1.31
SNIP1-204ENST00000638725 PRB2P02812 416 aaPredicted RBP6.86□□□□□ -1.31
SNIP1-204ENST00000638725 RPL37AP61513 92 aaKnown RBP6.86□□□□□ -1.31
SNIP1-204ENST00000638725 C1orf195Q5TG92 126 aa6.86□□□□□ -1.31
SNIP1-204ENST00000638725 KRTAP24-1Q3LI83 254 aa6.85□□□□□ -1.31
SNIP1-204ENST00000638725 BAHCC1Q9P281 2608 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 269.9 ms