RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 CDSNQ15517 529 aa12.25□□□□□ -0.45
CACNA1A-247ENST00000637769 K7EQZ3 153 aa12.23□□□□□ -0.45
CACNA1A-247ENST00000637769 CHTF8P0CG12 524 aa12.23□□□□□ -0.45
CACNA1A-247ENST00000637769 PRR15Q8IV56 129 aa12.22□□□□□ -0.45
CACNA1A-247ENST00000637769 RBM12B-AS1Q9P1G2 102 aa12.21□□□□□ -0.46
CACNA1A-247ENST00000637769 SPANXA2-OT1Q8N9U9 137 aa12.2□□□□□ -0.46
CACNA1A-247ENST00000637769 J3QL48 77 aa12.2□□□□□ -0.46
CACNA1A-247ENST00000637769 LCA10Q71F78 164 aa12.19□□□□□ -0.46
CACNA1A-247ENST00000637769 KCNQ1DNQ9H478 68 aa12.19□□□□□ -0.46
CACNA1A-247ENST00000637769 A0A1B0GVX0 72 aa12.18□□□□□ -0.46
CACNA1A-247ENST00000637769 DMBT1Q9UGM3 2413 aaPredicted RBP12.18□□□□□ -0.46
CACNA1A-247ENST00000637769 A8MUN3 132 aa12.17□□□□□ -0.46
CACNA1A-247ENST00000637769 LINC00304Q8N9R0 145 aa12.17□□□□□ -0.46
CACNA1A-247ENST00000637769 C9orf129Q5T035 196 aaKnown RBP12.16□□□□□ -0.46
CACNA1A-247ENST00000637769 ITPR3Q14573 2671 aa12.15□□□□□ -0.46
CACNA1A-247ENST00000637769 KRTAP10-9P60411 292 aa12.15□□□□□ -0.46
CACNA1A-247ENST00000637769 PRO3102Q9H379 93 aa12.15□□□□□ -0.46
CACNA1A-247ENST00000637769 LINC00588Q9Y4M8 146 aa12.12□□□□□ -0.47
CACNA1A-247ENST00000637769 Q8NAQ8 132 aa12.12□□□□□ -0.47
CACNA1A-247ENST00000637769 C8orf17Q9NRJ1 99 aa12.11□□□□□ -0.47
CACNA1A-247ENST00000637769 LINC00483Q53H64 154 aa12.09□□□□□ -0.47
CACNA1A-247ENST00000637769 HELZ2Q9BYK8 2649 aaKnown RBP12.08□□□□□ -0.47
CACNA1A-247ENST00000637769 ZNF861PO60384 105 aa12.08□□□□□ -0.48
CACNA1A-247ENST00000637769 IGLV1-50A0A075B6I6 118 aa12.07□□□□□ -0.48
CACNA1A-247ENST00000637769 LINC00528Q8N1L1 170 aa12.06□□□□□ -0.48
CACNA1A-247ENST00000637769 OBSCN-AS1Q96MR7 158 aa12.06□□□□□ -0.48
CACNA1A-247ENST00000637769 WWC2-AS2Q96NR7 200 aa12.06□□□□□ -0.48
CACNA1A-247ENST00000637769 CHD6Q8TD26 2715 aa12.06□□□□□ -0.48
CACNA1A-247ENST00000637769 IGFL1Q6UW32 110 aa12.05□□□□□ -0.48
CACNA1A-247ENST00000637769 NOTCH1P46531 2555 aa12.04□□□□□ -0.48
CACNA1A-247ENST00000637769 PLA2G2DQ9UNK4 145 aa12.04□□□□□ -0.48
CACNA1A-247ENST00000637769 A0A1W2PPR1 153 aa12.03□□□□□ -0.48
CACNA1A-247ENST00000637769 FAM104AQ969W3 186 aa12.02□□□□□ -0.49
CACNA1A-247ENST00000637769 C10orf142B7Z368 130 aa12.01□□□□□ -0.49
CACNA1A-247ENST00000637769 LITAFQ99732 161 aa12.01□□□□□ -0.49
CACNA1A-247ENST00000637769 UNC79Q9P2D8 2635 aa12□□□□□ -0.49
CACNA1A-247ENST00000637769 CSNK1G2-AS1Q8NCQ2 148 aa12□□□□□ -0.49
CACNA1A-247ENST00000637769 H7BZZ5 65 aa11.99□□□□□ -0.49
CACNA1A-247ENST00000637769 IGLV5-37A0A075B6J1 123 aa11.99□□□□□ -0.49
CACNA1A-247ENST00000637769 Q1T7F1 81 aa11.99□□□□□ -0.49
CACNA1A-247ENST00000637769 FAM168BA1KXE4 195 aa11.99□□□□□ -0.49
CACNA1A-247ENST00000637769 DSCR10P59022 87 aa11.97□□□□□ -0.49
CACNA1A-247ENST00000637769 TEX15Q9BXT5 2789 aa11.97□□□□□ -0.49
CACNA1A-247ENST00000637769 TLX1NBP0CAT3 122 aa11.97□□□□□ -0.49
CACNA1A-247ENST00000637769 C15orf56Q8N910 161 aa11.96□□□□□ -0.5
CACNA1A-247ENST00000637769 KMT2BQ9UMN6 2715 aaPredicted RBP11.95□□□□□ -0.5
CACNA1A-247ENST00000637769 LINC00336Q6ZUF6 198 aa11.93□□□□□ -0.5
CACNA1A-247ENST00000637769 COL6A5A8TX70 2615 aa11.92□□□□□ -0.5
CACNA1A-247ENST00000637769 PRR34Q9NV39 138 aa11.92□□□□□ -0.5
CACNA1A-247ENST00000637769 KLK9Q2XQG4 91 aa11.9□□□□□ -0.5
CACNA1A-247ENST00000637769 EP400Q96L91 3159 aa11.9□□□□□ -0.5
CACNA1A-247ENST00000637769 Q8N377 158 aa11.9□□□□□ -0.5
CACNA1A-247ENST00000637769 STAB2Q8WWQ8 2551 aa11.88□□□□□ -0.51
CACNA1A-247ENST00000637769 A0A0A0MQY5 61 aa11.87□□□□□ -0.51
CACNA1A-247ENST00000637769 WIPF1O43516 503 aa11.86□□□□□ -0.51
CACNA1A-247ENST00000637769 C9orf92A6NGG3 77 aa11.84□□□□□ -0.51
CACNA1A-247ENST00000637769 GCN1Q92616 2671 aaKnown RBP11.83□□□□□ -0.52
CACNA1A-247ENST00000637769 A0A0D9SG42 100 aa11.83□□□□□ -0.52
CACNA1A-247ENST00000637769 IGLV5-48A0A075B6I7 105 aa11.8□□□□□ -0.52
CACNA1A-247ENST00000637769 IGLV7-43P04211 117 aa11.8□□□□□ -0.52
CACNA1A-247ENST00000637769 C9orf163Q8N9P6 203 aa11.8□□□□□ -0.52
CACNA1A-247ENST00000637769 H3BS24 57 aa11.78□□□□□ -0.52
CACNA1A-247ENST00000637769 CNBPP62633 177 aaKnown RBP11.77□□□□□ -0.52
CACNA1A-247ENST00000637769 CAMK2N1Q7Z7J9 78 aa11.77□□□□□ -0.53
CACNA1A-247ENST00000637769 BAHCC1Q9P281 2608 aa11.76□□□□□ -0.53
CACNA1A-247ENST00000637769 SPRR4Q96PI1 79 aa11.76□□□□□ -0.53
CACNA1A-247ENST00000637769 HRES1P13985 223 aa11.75□□□□□ -0.53
CACNA1A-247ENST00000637769 A0A087WTM6 91 aa11.75□□□□□ -0.53
CACNA1A-247ENST00000637769 CEP350Q5VT06 3117 aa11.74□□□□□ -0.53
CACNA1A-247ENST00000637769 KRTAP24-1Q3LI83 254 aa11.74□□□□□ -0.53
CACNA1A-247ENST00000637769 Q75L30 129 aa11.73□□□□□ -0.53
CACNA1A-247ENST00000637769 A0A1B0GU33 70 aa11.72□□□□□ -0.53
CACNA1A-247ENST00000637769 DMAC1Q96GE9 116 aa11.72□□□□□ -0.53
CACNA1A-247ENST00000637769 PSORS1C2Q9UIG4 136 aa11.68□□□□□ -0.54
CACNA1A-247ENST00000637769 TEP1Q99973 2627 aaKnown RBP11.68□□□□□ -0.54
CACNA1A-247ENST00000637769 Q8N1X5 172 aa11.67□□□□□ -0.54
CACNA1A-247ENST00000637769 Q6ZSA8 131 aa11.66□□□□□ -0.54
CACNA1A-247ENST00000637769 IGLV7-46A0A075B6I9 117 aa11.64□□□□□ -0.55
CACNA1A-247ENST00000637769 OCR1Q9BZK8 76 aa11.63□□□□□ -0.55
CACNA1A-247ENST00000637769 LINC00612Q8N6U2 182 aa11.62□□□□□ -0.55
CACNA1A-247ENST00000637769 ZNF575Q86XF7 245 aa11.61□□□□□ -0.55
CACNA1A-247ENST00000637769 C19orf73Q9NVV2 129 aa11.61□□□□□ -0.55
CACNA1A-247ENST00000637769 K7EIL1 84 aa11.57□□□□□ -0.56
CACNA1A-247ENST00000637769 ITPR2Q14571 2701 aa11.56□□□□□ -0.56
CACNA1A-247ENST00000637769 FAM229BQ4G0N7 80 aa11.56□□□□□ -0.56
CACNA1A-247ENST00000637769 TNP2Q05952 138 aa11.55□□□□□ -0.56
CACNA1A-247ENST00000637769 SETXQ7Z333 2677 aaKnown RBP11.55□□□□□ -0.56
CACNA1A-247ENST00000637769 GOLGB1Q14789 3259 aaKnown RBP11.54□□□□□ -0.56
CACNA1A-247ENST00000637769 A0A1W2PNM2 257 aa11.53□□□□□ -0.56
CACNA1A-247ENST00000637769 CSAG1Q6PB30 78 aa11.52□□□□□ -0.57
CACNA1A-247ENST00000637769 DNAH12Q6ZR08 3092 aa11.5□□□□□ -0.57
CACNA1A-247ENST00000637769 MAP1AP78559 2803 aaPredicted RBP11.5□□□□□ -0.57
CACNA1A-247ENST00000637769 KRTAP10-11P60412 298 aa11.5□□□□□ -0.57
CACNA1A-247ENST00000637769 M0R2T5 61 aa11.49□□□□□ -0.57
CACNA1A-247ENST00000637769 PRR26Q8N8Z3 221 aa11.49□□□□□ -0.57
CACNA1A-247ENST00000637769 ZNF292O60281 2723 aa11.48□□□□□ -0.57
CACNA1A-247ENST00000637769 EIF4EBP3O60516 100 aaPredicted RBP11.48□□□□□ -0.57
CACNA1A-247ENST00000637769 A0A1W2PNN7 141 aa11.47□□□□□ -0.57
CACNA1A-247ENST00000637769 S4R3F8 94 aa11.47□□□□□ -0.57
CACNA1A-247ENST00000637769 ANAPC11Q9NYG5 84 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms