RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 ADAMTSL4-AS1Q5T5F5 129 aa11.33□□□□□ -0.6
CLN6-222ENST00000637667 SLC7A5P1Q8MH63 180 aa11.33□□□□□ -0.6
CLN6-222ENST00000637667 E9PLD3 99 aa11.32□□□□□ -0.6
CLN6-222ENST00000637667 NPC2P61916 151 aa11.32□□□□□ -0.6
CLN6-222ENST00000637667 JOSD1Q15040 202 aaPredicted RBP11.31□□□□□ -0.6
CLN6-222ENST00000637667 ZNF73O43830 326 aaPredicted RBP11.3□□□□□ -0.6
CLN6-222ENST00000637667 RPS29P62273 56 aaKnown RBP11.3□□□□□ -0.6
CLN6-222ENST00000637667 SYS1-DBNDD2H3BUS1 97 aa11.27□□□□□ -0.61
CLN6-222ENST00000637667 Q8N377 158 aa11.27□□□□□ -0.61
CLN6-222ENST00000637667 CBY1Q9Y3M2 126 aa11.26□□□□□ -0.61
CLN6-222ENST00000637667 C9orf153Q5TBE3 101 aa11.25□□□□□ -0.61
CLN6-222ENST00000637667 ST20-AS1Q8NBB2 130 aa11.25□□□□□ -0.61
CLN6-222ENST00000637667 LITAFQ99732 161 aa11.25□□□□□ -0.61
CLN6-222ENST00000637667 SLC25A20O43772 301 aa11.24□□□□□ -0.61
CLN6-222ENST00000637667 ASB16-AS1Q495Z4 193 aa11.24□□□□□ -0.61
CLN6-222ENST00000637667 LINC00308Q8TCZ7 52 aa11.24□□□□□ -0.61
CLN6-222ENST00000637667 HIST1H2BKO60814 126 aa11.23□□□□□ -0.61
CLN6-222ENST00000637667 HIST1H2BJP06899 126 aa11.23□□□□□ -0.61
CLN6-222ENST00000637667 HIST1H2BOP23527 126 aa11.23□□□□□ -0.61
CLN6-222ENST00000637667 HIST1H2BBP33778 126 aa11.23□□□□□ -0.61
CLN6-222ENST00000637667 HINT1P49773 126 aaPredicted RBP11.23□□□□□ -0.61
CLN6-222ENST00000637667 HIST1H2BDP58876 126 aa11.23□□□□□ -0.61
CLN6-222ENST00000637667 HIST1H2BCP62807 126 aa11.23□□□□□ -0.61
CLN6-222ENST00000637667 HIST2H2BEQ16778 126 aa11.23□□□□□ -0.61
CLN6-222ENST00000637667 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.23□□□□□ -0.61
CLN6-222ENST00000637667 HIST1H2BHQ93079 126 aa11.23□□□□□ -0.61
CLN6-222ENST00000637667 HIST1H2BNQ99877 126 aa11.23□□□□□ -0.61
CLN6-222ENST00000637667 HIST1H2BMQ99879 126 aa11.23□□□□□ -0.61
CLN6-222ENST00000637667 SPANXCQ9NY87 97 aa11.23□□□□□ -0.61
CLN6-222ENST00000637667 C5orf52A6NGY3 159 aa11.22□□□□□ -0.61
CLN6-222ENST00000637667 TIMM17BO60830 172 aa11.22□□□□□ -0.61
CLN6-222ENST00000637667 LINC01545Q5VT33 79 aa11.22□□□□□ -0.61
CLN6-222ENST00000637667 OR13C6PQ8NH95 151 aa11.2□□□□□ -0.62
CLN6-222ENST00000637667 SEC61BP60468 96 aaKnown RBP11.19□□□□□ -0.62
CLN6-222ENST00000637667 PET117Q6UWS5 81 aa11.19□□□□□ -0.62
CLN6-222ENST00000637667 ZNF815PA8K554 130 aa11.18□□□□□ -0.62
CLN6-222ENST00000637667 SPANXDQ9BXN6 97 aa11.17□□□□□ -0.62
CLN6-222ENST00000637667 SPRR1BP22528 89 aa11.16□□□□□ -0.62
CLN6-222ENST00000637667 DHRS4-AS1Q9P1J3 65 aa11.16□□□□□ -0.62
CLN6-222ENST00000637667 TTTY13Q9BZ97 58 aa11.15□□□□□ -0.62
CLN6-222ENST00000637667 SLC25A34Q6PIV7 304 aa11.14□□□□□ -0.63
CLN6-222ENST00000637667 KRTAP4-1Q9BYQ7 146 aa11.14□□□□□ -0.63
CLN6-222ENST00000637667 LINC00518Q8N0U6 118 aa11.13□□□□□ -0.63
CLN6-222ENST00000637667 C3orf79P0CE67 100 aa11.12□□□□□ -0.63
CLN6-222ENST00000637667 XP32Q5T750 250 aa11.12□□□□□ -0.63
CLN6-222ENST00000637667 COX7BP24311 80 aa11.11□□□□□ -0.63
CLN6-222ENST00000637667 ELOF1P60002 83 aaKnown RBP11.11□□□□□ -0.63
CLN6-222ENST00000637667 C6orf99Q4VX62 202 aa11.1□□□□□ -0.63
CLN6-222ENST00000637667 LAMTOR3Q9UHA4 124 aa11.1□□□□□ -0.63
CLN6-222ENST00000637667 KRTDAPP60985 99 aa11.08□□□□□ -0.64
CLN6-222ENST00000637667 COA6Q5JTJ3 125 aaKnown RBP11.07□□□□□ -0.64
CLN6-222ENST00000637667 HRCT1Q6UXD1 115 aa11.07□□□□□ -0.64
CLN6-222ENST00000637667 LIMD2Q9BT23 127 aa11.07□□□□□ -0.64
CLN6-222ENST00000637667 LINC01547P58512 204 aaPredicted RBP11.06□□□□□ -0.64
CLN6-222ENST00000637667 SCGB1D4Q6XE38 83 aa11.06□□□□□ -0.64
CLN6-222ENST00000637667 TAL2Q16559 108 aa11.05□□□□□ -0.64
CLN6-222ENST00000637667 TRBV7-6A0A0J9YX20 115 aa11.03□□□□□ -0.64
CLN6-222ENST00000637667 C20orf202A1L168 122 aa11.03□□□□□ -0.64
CLN6-222ENST00000637667 Q1RN00 199 aa11.03□□□□□ -0.64
CLN6-222ENST00000637667 ANKRD39Q53RE8 183 aa11.03□□□□□ -0.64
CLN6-222ENST00000637667 DEFB105AQ8NG35 78 aa11.03□□□□□ -0.64
CLN6-222ENST00000637667 COPS9Q8WXC6 57 aa11.03□□□□□ -0.64
CLN6-222ENST00000637667 IFITM1P13164 125 aa11.02□□□□□ -0.65
CLN6-222ENST00000637667 TEX49A0A1B0GTD5 131 aa11.01□□□□□ -0.65
CLN6-222ENST00000637667 CD164Q04900 197 aa11□□□□□ -0.65
CLN6-222ENST00000637667 PRO1933Q9H354 126 aa11□□□□□ -0.65
CLN6-222ENST00000637667 A0A1B0GWB2 263 aa10.99□□□□□ -0.65
CLN6-222ENST00000637667 Q6ZVH6 145 aa10.99□□□□□ -0.65
CLN6-222ENST00000637667 ATOH7Q8N100 152 aa10.99□□□□□ -0.65
CLN6-222ENST00000637667 A6NDN8 102 aa10.98□□□□□ -0.65
CLN6-222ENST00000637667 SMIM29Q86T20 159 aa10.96□□□□□ -0.65
CLN6-222ENST00000637667 PCP2Q8IVA1 136 aa10.96□□□□□ -0.65
CLN6-222ENST00000637667 MUSTN1Q8IVN3 82 aa10.96□□□□□ -0.65
CLN6-222ENST00000637667 IGLV5-48A0A075B6I7 105 aa10.95□□□□□ -0.66
CLN6-222ENST00000637667 C9orf92A6NGG3 77 aa10.95□□□□□ -0.66
CLN6-222ENST00000637667 H7C2G1 150 aa10.95□□□□□ -0.66
CLN6-222ENST00000637667 AKR1D1P51857 326 aa10.94□□□□□ -0.66
CLN6-222ENST00000637667 PCOTHQ58A44 107 aa10.93□□□□□ -0.66
CLN6-222ENST00000637667 A4D1N5 150 aa10.92□□□□□ -0.66
CLN6-222ENST00000637667 Q5XG85 94 aa10.92□□□□□ -0.66
CLN6-222ENST00000637667 TRAV13-2A0A0B4J235 113 aa10.91□□□□□ -0.66
CLN6-222ENST00000637667 CRCT1Q9UGL9 99 aa10.91□□□□□ -0.66
CLN6-222ENST00000637667 SMIM11BQ8TCY0 68 aa10.9□□□□□ -0.66
CLN6-222ENST00000637667 A0A0G2JQZ4 141 aa10.89□□□□□ -0.67
CLN6-222ENST00000637667 LCE2CQ5TA81 110 aa10.89□□□□□ -0.67
CLN6-222ENST00000637667 NHP2Q9NX24 153 aaKnown RBP10.89□□□□□ -0.67
CLN6-222ENST00000637667 FSIP2Q5CZC0 6907 aa10.88□□□□□ -0.67
CLN6-222ENST00000637667 SNRPEP62304 92 aaKnown RBP10.88□□□□□ -0.67
CLN6-222ENST00000637667 C1orf195Q5TG92 126 aa10.88□□□□□ -0.67
CLN6-222ENST00000637667 IGLV8-61A0A075B6I0 122 aa10.87□□□□□ -0.67
CLN6-222ENST00000637667 LCE2DQ5TA82 110 aaPredicted RBP10.87□□□□□ -0.67
CLN6-222ENST00000637667 KRTAP19-2Q3LHN2 52 aa10.85□□□□□ -0.67
CLN6-222ENST00000637667 VAMP3Q15836 100 aa10.81□□□□□ -0.68
CLN6-222ENST00000637667 F8WEM9 126 aa10.79□□□□□ -0.68
CLN6-222ENST00000637667 LINC00575Q6W349 94 aa10.79□□□□□ -0.68
CLN6-222ENST00000637667 HIST3H2BBQ8N257 126 aa10.79□□□□□ -0.68
CLN6-222ENST00000637667 HIST1H2BLQ99880 126 aa10.79□□□□□ -0.68
CLN6-222ENST00000637667 HSBP1L1C9JCN9 74 aa10.78□□□□□ -0.68
CLN6-222ENST00000637667 TCL1BO95988 128 aa10.78□□□□□ -0.68
CLN6-222ENST00000637667 S100A2P29034 98 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms