RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 SPACA4Q8TDM5 124 aa13.32□□□□□ -0.28
CLN8-213ENST00000637156 DPH3Q96FX2 82 aa13.32□□□□□ -0.28
CLN8-213ENST00000637156 LINC00336Q6ZUF6 198 aa13.31□□□□□ -0.28
CLN8-213ENST00000637156 RYR3Q15413 4870 aa13.31□□□□□ -0.28
CLN8-213ENST00000637156 SLC25A20O43772 301 aa13.31□□□□□ -0.28
CLN8-213ENST00000637156 PPDPFLQ8WWR9 84 aa13.31□□□□□ -0.28
CLN8-213ENST00000637156 RPL37AP8A6NKH3 93 aa13.3□□□□□ -0.28
CLN8-213ENST00000637156 IGLV1-50A0A075B6I6 118 aa13.29□□□□□ -0.28
CLN8-213ENST00000637156 PCP4P48539 62 aa13.29□□□□□ -0.28
CLN8-213ENST00000637156 TRAV23DV6A0A075B6W5 121 aa13.29□□□□□ -0.28
CLN8-213ENST00000637156 C6orf99Q4VX62 202 aa13.29□□□□□ -0.28
CLN8-213ENST00000637156 C9JAW5 83 aa13.28□□□□□ -0.28
CLN8-213ENST00000637156 CLEC2BQ92478 149 aa13.28□□□□□ -0.28
CLN8-213ENST00000637156 KCNQ1DNQ9H478 68 aa13.28□□□□□ -0.28
CLN8-213ENST00000637156 EPM2AB3EWF7 344 aa13.27□□□□□ -0.28
CLN8-213ENST00000637156 A0A087WYN8 130 aa13.27□□□□□ -0.29
CLN8-213ENST00000637156 DNAH8Q96JB1 4490 aa13.26□□□□□ -0.29
CLN8-213ENST00000637156 ANKRD29Q8N6D5 301 aa13.26□□□□□ -0.29
CLN8-213ENST00000637156 ZNF73O43830 326 aaPredicted RBP13.25□□□□□ -0.29
CLN8-213ENST00000637156 PHF5AQ7RTV0 110 aaKnown RBP13.25□□□□□ -0.29
CLN8-213ENST00000637156 LST1O00453 97 aa13.25□□□□□ -0.29
CLN8-213ENST00000637156 FAM218AQ96MZ4 157 aa13.25□□□□□ -0.29
CLN8-213ENST00000637156 FAM30AQ9NZY2 134 aa13.24□□□□□ -0.29
CLN8-213ENST00000637156 H0YGX0 51 aa13.23□□□□□ -0.29
CLN8-213ENST00000637156 H3BT86 120 aa13.23□□□□□ -0.29
CLN8-213ENST00000637156 KRTAP10-1P60331 282 aa13.23□□□□□ -0.29
CLN8-213ENST00000637156 PKHD1P08F94 4074 aa13.23□□□□□ -0.29
CLN8-213ENST00000637156 A0A1B0GVY2 172 aa13.22□□□□□ -0.29
CLN8-213ENST00000637156 KRTAP11-1Q8IUC1 163 aa13.21□□□□□ -0.29
CLN8-213ENST00000637156 DIRC1Q969H9 104 aa13.21□□□□□ -0.29
CLN8-213ENST00000637156 PLAC8Q9NZF1 115 aa13.2□□□□□ -0.3
CLN8-213ENST00000637156 SIGMAR1Q99720 223 aa13.19□□□□□ -0.3
CLN8-213ENST00000637156 KRTAP4-16G5E9R7 235 aaPredicted RBP13.18□□□□□ -0.3
CLN8-213ENST00000637156 SPRR1AP35321 89 aa13.18□□□□□ -0.3
CLN8-213ENST00000637156 PRYO14603 147 aa13.17□□□□□ -0.3
CLN8-213ENST00000637156 TRBV7-6A0A0J9YX20 115 aa13.16□□□□□ -0.3
CLN8-213ENST00000637156 Q6ZSA8 131 aa13.16□□□□□ -0.3
CLN8-213ENST00000637156 LRP1BQ9NZR2 4599 aa13.16□□□□□ -0.3
CLN8-213ENST00000637156 ELOF1P60002 83 aaKnown RBP13.16□□□□□ -0.3
CLN8-213ENST00000637156 LINC00575Q6W349 94 aa13.15□□□□□ -0.3
CLN8-213ENST00000637156 SCGB1A1P11684 91 aa13.14□□□□□ -0.31
CLN8-213ENST00000637156 COX7BP24311 80 aa13.14□□□□□ -0.31
CLN8-213ENST00000637156 UBE2BP63146 152 aa13.14□□□□□ -0.31
CLN8-213ENST00000637156 REG3GQ6UW15 175 aa13.14□□□□□ -0.31
CLN8-213ENST00000637156 TRACP01848 142 aa13.14□□□□□ -0.31
CLN8-213ENST00000637156 CIRBP-AS1Q8TBR5 109 aa13.14□□□□□ -0.31
CLN8-213ENST00000637156 DYNC1H1Q14204 4646 aaKnown RBP13.14□□□□□ -0.31
CLN8-213ENST00000637156 LINC00528Q8N1L1 170 aa13.12□□□□□ -0.31
CLN8-213ENST00000637156 B5MCH6 92 aa13.11□□□□□ -0.31
CLN8-213ENST00000637156 CDIP1Q9H305 208 aa13.1□□□□□ -0.31
CLN8-213ENST00000637156 hADV29S1A0JD25 119 aa13.09□□□□□ -0.31
CLN8-213ENST00000637156 SCXQ7RTU7 201 aa13.09□□□□□ -0.31
CLN8-213ENST00000637156 ETDCA0A1B0GVM5 59 aa13.08□□□□□ -0.32
CLN8-213ENST00000637156 A0A1B0GX51 115 aa13.08□□□□□ -0.32
CLN8-213ENST00000637156 Q6ZRX8 168 aa13.08□□□□□ -0.32
CLN8-213ENST00000637156 HAMPP81172 84 aa13.07□□□□□ -0.32
CLN8-213ENST00000637156 Q9BRP9 147 aa13.06□□□□□ -0.32
CLN8-213ENST00000637156 TEX49A0A1B0GTD5 131 aa13.05□□□□□ -0.32
CLN8-213ENST00000637156 DNAL4O96015 105 aa13.04□□□□□ -0.32
CLN8-213ENST00000637156 INAFM2P0DMQ5 153 aa13.04□□□□□ -0.32
CLN8-213ENST00000637156 C21orf62-AS1Q17RA5 79 aa13.04□□□□□ -0.32
CLN8-213ENST00000637156 FAM19A1Q7Z5A9 133 aa13.04□□□□□ -0.32
CLN8-213ENST00000637156 SNCGO76070 127 aa13.03□□□□□ -0.32
CLN8-213ENST00000637156 FAM240AA0A1B0GVK7 77 aa13.02□□□□□ -0.33
CLN8-213ENST00000637156 BAALC-AS2P0C853 105 aa13.02□□□□□ -0.33
CLN8-213ENST00000637156 PRLHP81277 87 aa13.02□□□□□ -0.33
CLN8-213ENST00000637156 PSORS1C2Q9UIG4 136 aa13.02□□□□□ -0.33
CLN8-213ENST00000637156 BCE1O60756 84 aa12.99□□□□□ -0.33
CLN8-213ENST00000637156 Q6ZQY7 126 aa12.99□□□□□ -0.33
CLN8-213ENST00000637156 SMCR5Q8TEV8 140 aa12.99□□□□□ -0.33
CLN8-213ENST00000637156 DHRS4-AS1Q9P1J3 65 aa12.99□□□□□ -0.33
CLN8-213ENST00000637156 SRRM2Q9UQ35 2752 aaKnown RBP12.99□□□□□ -0.33
CLN8-213ENST00000637156 ERC2-IT1O76042 136 aa12.98□□□□□ -0.33
CLN8-213ENST00000637156 ORMDL1Q9P0S3 153 aa12.97□□□□□ -0.33
CLN8-213ENST00000637156 H0Y9J4 135 aa12.97□□□□□ -0.33
CLN8-213ENST00000637156 XGP55808 180 aa12.96□□□□□ -0.33
CLN8-213ENST00000637156 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.96□□□□□ -0.33
CLN8-213ENST00000637156 KRTAP13-1Q8IUC0 172 aa12.95□□□□□ -0.34
CLN8-213ENST00000637156 APOBP04114 4563 aaKnown RBP12.95□□□□□ -0.34
CLN8-213ENST00000637156 C1orf137Q5JT78 98 aa12.95□□□□□ -0.34
CLN8-213ENST00000637156 ACYP1P07311 99 aa12.94□□□□□ -0.34
CLN8-213ENST00000637156 UBE2AP49459 152 aa12.93□□□□□ -0.34
CLN8-213ENST00000637156 HIGD2AQ9BW72 106 aa12.93□□□□□ -0.34
CLN8-213ENST00000637156 MT-ATP8P03928 68 aa12.92□□□□□ -0.34
CLN8-213ENST00000637156 ST20-AS1Q8NBB2 130 aa12.92□□□□□ -0.34
CLN8-213ENST00000637156 TMEM256-PLSCR3K7ERE1 68 aa12.91□□□□□ -0.34
CLN8-213ENST00000637156 LINC01547P58512 204 aaPredicted RBP12.89□□□□□ -0.35
CLN8-213ENST00000637156 DEFB105AQ8NG35 78 aa12.88□□□□□ -0.35
CLN8-213ENST00000637156 VPS13BQ7Z7G8 4022 aa12.87□□□□□ -0.35
CLN8-213ENST00000637156 Q8N377 158 aa12.87□□□□□ -0.35
CLN8-213ENST00000637156 ZNF861PO60384 105 aa12.86□□□□□ -0.35
CLN8-213ENST00000637156 IGLV7-43P04211 117 aa12.85□□□□□ -0.35
CLN8-213ENST00000637156 IGLV5-48A0A075B6I7 105 aa12.85□□□□□ -0.35
CLN8-213ENST00000637156 Q6Q795 121 aa12.85□□□□□ -0.35
CLN8-213ENST00000637156 H3BQ85 93 aa12.83□□□□□ -0.36
CLN8-213ENST00000637156 GHRHP01286 108 aa12.83□□□□□ -0.36
CLN8-213ENST00000637156 FAT1Q14517 4588 aa12.83□□□□□ -0.36
CLN8-213ENST00000637156 OBSCN-AS1Q96MR7 158 aa12.82□□□□□ -0.36
CLN8-213ENST00000637156 EPPK1P58107 5090 aaKnown RBP12.82□□□□□ -0.36
CLN8-213ENST00000637156 SMR3BP02814 79 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms