RNA–Protein interactions for RNA: ENST00000636640.1

SYNGAP1-216, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 118 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-216ENST00000636640 MYMXA0A1B0GTQ4 84 aa0.84□□□□□ -2.27
SYNGAP1-216ENST00000636640 LINC01549A6NIU2 74 aa0.84□□□□□ -2.27
SYNGAP1-216ENST00000636640 KRTAP16-1A8MUX0 517 aa0.84□□□□□ -2.27
SYNGAP1-216ENST00000636640 KRTAP9-1A8MXZ3 250 aaPredicted RBP0.84□□□□□ -2.27
SYNGAP1-216ENST00000636640 LCE2BO14633 110 aa0.84□□□□□ -2.27
SYNGAP1-216ENST00000636640 SLC25A20O43772 301 aa0.84□□□□□ -2.27
SYNGAP1-216ENST00000636640 ZNF73O43830 326 aaPredicted RBP0.84□□□□□ -2.27
SYNGAP1-216ENST00000636640 ATP6V1G1O75348 118 aa0.84□□□□□ -2.27
SYNGAP1-216ENST00000636640 HSBP1O75506 76 aa0.84□□□□□ -2.27
SYNGAP1-216ENST00000636640 DPM2O94777 84 aa0.84□□□□□ -2.27
SYNGAP1-216ENST00000636640 LEPROTL1O95214 131 aa0.84□□□□□ -2.27
SYNGAP1-216ENST00000636640 SPINK1P00995 79 aa0.84□□□□□ -2.27
SYNGAP1-216ENST00000636640 IGKCP01834 107 aa0.84□□□□□ -2.27
SYNGAP1-216ENST00000636640 C3orf79P0CE67 100 aa0.84□□□□□ -2.27
SYNGAP1-216ENST00000636640 SPRR1BP22528 89 aa0.84□□□□□ -2.27
SYNGAP1-216ENST00000636640 SEC61BP60468 96 aaKnown RBP0.84□□□□□ -2.27
SYNGAP1-216ENST00000636640 COX19Q49B96 90 aa0.84□□□□□ -2.27
SYNGAP1-216ENST00000636640 C6orf99Q4VX62 202 aa0.84□□□□□ -2.27
SYNGAP1-216ENST00000636640 ANKRD39Q53RE8 183 aa0.84□□□□□ -2.27
SYNGAP1-216ENST00000636640 C4orf48Q5BLP8 95 aa0.84□□□□□ -2.27
SYNGAP1-216ENST00000636640 C9orf153Q5TBE3 101 aa0.84□□□□□ -2.27
SYNGAP1-216ENST00000636640 SSBP3-AS1Q7Z2R9 100 aa0.84□□□□□ -2.27
SYNGAP1-216ENST00000636640 ATOH7Q8N100 152 aa0.84□□□□□ -2.27
SYNGAP1-216ENST00000636640 DEFB105AQ8NG35 78 aa0.84□□□□□ -2.27
SYNGAP1-216ENST00000636640 LINC00308Q8TCZ7 52 aa0.84□□□□□ -2.27
SYNGAP1-216ENST00000636640 CHCHD1Q96BP2 118 aaKnown RBP0.84□□□□□ -2.27
SYNGAP1-216ENST00000636640 MAP1LC3CQ9BXW4 147 aa0.84□□□□□ -2.27
SYNGAP1-216ENST00000636640 KRTAP9-8Q9BYQ0 159 aa0.84□□□□□ -2.27
SYNGAP1-216ENST00000636640 ZNF706Q9Y5V0 76 aaPredicted RBP0.84□□□□□ -2.27
SYNGAP1-216ENST00000636640 KRTAP9-7A8MTY7 169 aa0.83□□□□□ -2.28
SYNGAP1-216ENST00000636640 E9PLD3 99 aa0.83□□□□□ -2.28
SYNGAP1-216ENST00000636640 SYS1-DBNDD2H3BUS1 97 aa0.83□□□□□ -2.28
SYNGAP1-216ENST00000636640 HIST1H2BKO60814 126 aa0.83□□□□□ -2.28
SYNGAP1-216ENST00000636640 SNAPINO95295 136 aa0.83□□□□□ -2.28
SYNGAP1-216ENST00000636640 NDUFC2O95298 119 aa0.83□□□□□ -2.28
SYNGAP1-216ENST00000636640 MT2AP02795 61 aa0.83□□□□□ -2.28
SYNGAP1-216ENST00000636640 HIST1H2BJP06899 126 aa0.83□□□□□ -2.28
SYNGAP1-216ENST00000636640 LGALS3P17931 250 aaKnown RBP0.83□□□□□ -2.28
SYNGAP1-216ENST00000636640 HIST1H2BOP23527 126 aa0.83□□□□□ -2.28
SYNGAP1-216ENST00000636640 HIST1H2BBP33778 126 aa0.83□□□□□ -2.28
SYNGAP1-216ENST00000636640 HIST1H2BDP58876 126 aa0.83□□□□□ -2.28
SYNGAP1-216ENST00000636640 ELOF1P60002 83 aaKnown RBP0.83□□□□□ -2.28
SYNGAP1-216ENST00000636640 RPL37P61927 97 aaKnown RBP0.83□□□□□ -2.28
SYNGAP1-216ENST00000636640 RPS29P62273 56 aaKnown RBP0.83□□□□□ -2.28
SYNGAP1-216ENST00000636640 HIST1H2BCP62807 126 aa0.83□□□□□ -2.28
SYNGAP1-216ENST00000636640 HERV-K104P63124 156 aa0.83□□□□□ -2.28
SYNGAP1-216ENST00000636640 CTAG1AP78358 180 aa0.83□□□□□ -2.28
SYNGAP1-216ENST00000636640 HIST2H2BEQ16778 126 aa0.83□□□□□ -2.28
SYNGAP1-216ENST00000636640 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.83□□□□□ -2.28
SYNGAP1-216ENST00000636640 S100A7L2Q5SY68 101 aa0.83□□□□□ -2.28
SYNGAP1-216ENST00000636640 LINC01545Q5VT33 79 aa0.83□□□□□ -2.28
SYNGAP1-216ENST00000636640 PCP2Q8IVA1 136 aa0.83□□□□□ -2.28
SYNGAP1-216ENST00000636640 MUSTN1Q8IVN3 82 aa0.83□□□□□ -2.28
SYNGAP1-216ENST00000636640 LINC00518Q8N0U6 118 aa0.83□□□□□ -2.28
SYNGAP1-216ENST00000636640 OR13C6PQ8NH95 151 aa0.83□□□□□ -2.28
SYNGAP1-216ENST00000636640 HIST1H2BHQ93079 126 aa0.83□□□□□ -2.28
SYNGAP1-216ENST00000636640 HIST1H2BNQ99877 126 aa0.83□□□□□ -2.28
SYNGAP1-216ENST00000636640 HIST1H2BMQ99879 126 aa0.83□□□□□ -2.28
SYNGAP1-216ENST00000636640 SPANXB1Q9NS25 103 aaPredicted RBP0.83□□□□□ -2.28
SYNGAP1-216ENST00000636640 FCGBPQ9Y6R7 5405 aaPredicted RBP0.82□□□□□ -2.28
SYNGAP1-216ENST00000636640 IGLV5-48A0A075B6I7 105 aa0.82□□□□□ -2.28
SYNGAP1-216ENST00000636640 ZNF815PA8K554 130 aa0.82□□□□□ -2.28
SYNGAP1-216ENST00000636640 MT1FP04733 61 aa0.82□□□□□ -2.28
SYNGAP1-216ENST00000636640 COX7BP24311 80 aa0.82□□□□□ -2.28
SYNGAP1-216ENST00000636640 PLNP26678 52 aa0.82□□□□□ -2.28
SYNGAP1-216ENST00000636640 TAL2Q16559 108 aa0.82□□□□□ -2.28
SYNGAP1-216ENST00000636640 Q6Q795 121 aa0.82□□□□□ -2.28
SYNGAP1-216ENST00000636640 SFTA2Q6UW10 78 aa0.82□□□□□ -2.28
SYNGAP1-216ENST00000636640 IGFL1Q6UW32 110 aa0.82□□□□□ -2.28
SYNGAP1-216ENST00000636640 NOTCH2NLQ7Z3S9 236 aa0.82□□□□□ -2.28
SYNGAP1-216ENST00000636640 KRTAP19-1Q8IUB9 90 aa0.82□□□□□ -2.28
SYNGAP1-216ENST00000636640 SVBPQ8N300 66 aa0.82□□□□□ -2.28
SYNGAP1-216ENST00000636640 SMIM11BQ8TCY0 68 aa0.82□□□□□ -2.28
SYNGAP1-216ENST00000636640 SPANXCQ9NY87 97 aa0.82□□□□□ -2.28
SYNGAP1-216ENST00000636640 HSPB8Q9UJY1 196 aa0.82□□□□□ -2.28
SYNGAP1-216ENST00000636640 TEX49A0A1B0GTD5 131 aa0.81□□□□□ -2.28
SYNGAP1-216ENST00000636640 A6NDN8 102 aa0.81□□□□□ -2.28
SYNGAP1-216ENST00000636640 H3BUT2 72 aa0.81□□□□□ -2.28
SYNGAP1-216ENST00000636640 M0R2T5 61 aa0.81□□□□□ -2.28
SYNGAP1-216ENST00000636640 TIMM17BO60830 172 aa0.81□□□□□ -2.28
SYNGAP1-216ENST00000636640 NMUP48645 174 aa0.81□□□□□ -2.28
SYNGAP1-216ENST00000636640 AKR1D1P51857 326 aa0.81□□□□□ -2.28
SYNGAP1-216ENST00000636640 KRTDAPP60985 99 aa0.81□□□□□ -2.28
SYNGAP1-216ENST00000636640 HERVK_113P61574 105 aa0.81□□□□□ -2.28
SYNGAP1-216ENST00000636640 CD164Q04900 197 aa0.81□□□□□ -2.28
SYNGAP1-216ENST00000636640 Q5XG85 94 aa0.81□□□□□ -2.28
SYNGAP1-216ENST00000636640 PET117Q6UWS5 81 aa0.81□□□□□ -2.28
SYNGAP1-216ENST00000636640 COX6B2Q6YFQ2 88 aa0.81□□□□□ -2.28
SYNGAP1-216ENST00000636640 Q6ZQY7 126 aa0.81□□□□□ -2.28
SYNGAP1-216ENST00000636640 OBSCN-AS1Q96MR7 158 aa0.81□□□□□ -2.28
SYNGAP1-216ENST00000636640 FAM218AQ96MZ4 157 aa0.81□□□□□ -2.28
SYNGAP1-216ENST00000636640 Q96NJ1 140 aa0.81□□□□□ -2.28
SYNGAP1-216ENST00000636640 C12orf57Q99622 126 aa0.81□□□□□ -2.28
SYNGAP1-216ENST00000636640 MIEN1Q9BRT3 115 aa0.81□□□□□ -2.28
SYNGAP1-216ENST00000636640 LIMD2Q9BT23 127 aa0.81□□□□□ -2.28
SYNGAP1-216ENST00000636640 SPANXDQ9BXN6 97 aa0.81□□□□□ -2.28
SYNGAP1-216ENST00000636640 KRTAP9-3Q9BYQ3 159 aa0.81□□□□□ -2.28
SYNGAP1-216ENST00000636640 PRO1933Q9H354 126 aa0.81□□□□□ -2.28
SYNGAP1-216ENST00000636640 DHRS4-AS1Q9P1J3 65 aa0.81□□□□□ -2.28
SYNGAP1-216ENST00000636640 LAMTOR3Q9UHA4 124 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms