RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 TMEM170BQ5T4T1 132 aa9.88□□□□□ -0.83
CLN6-212ENST00000636020 TMEM223A0PJW6 202 aa9.87□□□□□ -0.83
CLN6-212ENST00000636020 PAM16Q9Y3D7 125 aa9.87□□□□□ -0.83
CLN6-212ENST00000636020 SLC25A20O43772 301 aa9.86□□□□□ -0.83
CLN6-212ENST00000636020 VPREB1P12018 145 aa9.86□□□□□ -0.83
CLN6-212ENST00000636020 S100A12P80511 92 aa9.86□□□□□ -0.83
CLN6-212ENST00000636020 SPATA45Q537H7 98 aa9.86□□□□□ -0.83
CLN6-212ENST00000636020 ZNF706Q9Y5V0 76 aaPredicted RBP9.86□□□□□ -0.83
CLN6-212ENST00000636020 MACF1Q9UPN3 7388 aaKnown RBP9.86□□□□□ -0.83
CLN6-212ENST00000636020 HSBP1L1C9JCN9 74 aa9.85□□□□□ -0.83
CLN6-212ENST00000636020 SYNE2Q8WXH0 6885 aaKnown RBP9.84□□□□□ -0.83
CLN6-212ENST00000636020 SMIM1B2RUZ4 78 aa9.84□□□□□ -0.83
CLN6-212ENST00000636020 E9PLD3 99 aa9.84□□□□□ -0.83
CLN6-212ENST00000636020 H3BRM9 83 aa9.83□□□□□ -0.84
CLN6-212ENST00000636020 SPINK8P0C7L1 97 aa9.83□□□□□ -0.84
CLN6-212ENST00000636020 HERVK_113P61574 105 aa9.83□□□□□ -0.84
CLN6-212ENST00000636020 COX7B2Q8TF08 81 aa9.83□□□□□ -0.84
CLN6-212ENST00000636020 IGLV5-39A0A0G2JS06 123 aa9.82□□□□□ -0.84
CLN6-212ENST00000636020 LEPROTO15243 131 aa9.8□□□□□ -0.84
CLN6-212ENST00000636020 TSPEAR-AS2P59090 65 aa9.8□□□□□ -0.84
CLN6-212ENST00000636020 COX6B2Q6YFQ2 88 aa9.79□□□□□ -0.84
CLN6-212ENST00000636020 COX8AP10176 69 aa9.78□□□□□ -0.84
CLN6-212ENST00000636020 NMUP48645 174 aa9.78□□□□□ -0.84
CLN6-212ENST00000636020 Q8NDZ9 215 aa9.78□□□□□ -0.84
CLN6-212ENST00000636020 PRO1933Q9H354 126 aa9.78□□□□□ -0.84
CLN6-212ENST00000636020 J3QQQ9 107 aa9.77□□□□□ -0.85
CLN6-212ENST00000636020 RPL24P83731 157 aaKnown RBP9.77□□□□□ -0.85
CLN6-212ENST00000636020 LINC00483Q53H64 154 aa9.77□□□□□ -0.85
CLN6-212ENST00000636020 PCP2Q8IVA1 136 aa9.77□□□□□ -0.85
CLN6-212ENST00000636020 C14orf144Q96I85 54 aa9.77□□□□□ -0.85
CLN6-212ENST00000636020 TTTY13Q9BZ97 58 aa9.77□□□□□ -0.85
CLN6-212ENST00000636020 SND1-IT1Q9HBX3 110 aa9.77□□□□□ -0.85
CLN6-212ENST00000636020 KRTAP4-16G5E9R7 235 aaPredicted RBP9.76□□□□□ -0.85
CLN6-212ENST00000636020 MOBPQ13875 183 aa9.76□□□□□ -0.85
CLN6-212ENST00000636020 SSBP3-AS1Q7Z2R9 100 aa9.76□□□□□ -0.85
CLN6-212ENST00000636020 PFN2P35080 140 aa9.75□□□□□ -0.85
CLN6-212ENST00000636020 BOD1L2Q8IYS8 172 aa9.75□□□□□ -0.85
CLN6-212ENST00000636020 SMCR5Q8TEV8 140 aa9.75□□□□□ -0.85
CLN6-212ENST00000636020 DLEU1O43261 78 aa9.74□□□□□ -0.85
CLN6-212ENST00000636020 LGALS3P17931 250 aaKnown RBP9.74□□□□□ -0.85
CLN6-212ENST00000636020 TSTD3H0UI37 97 aa9.73□□□□□ -0.85
CLN6-212ENST00000636020 SLC25A34Q6PIV7 304 aa9.73□□□□□ -0.85
CLN6-212ENST00000636020 UQCR10Q9UDW1 63 aa9.73□□□□□ -0.85
CLN6-212ENST00000636020 IGLV9-49A0A0B4J1Y8 123 aa9.72□□□□□ -0.85
CLN6-212ENST00000636020 MYMXA0A1B0GTQ4 84 aa9.72□□□□□ -0.85
CLN6-212ENST00000636020 ZNF815PA8K554 130 aa9.72□□□□□ -0.85
CLN6-212ENST00000636020 MIEN1Q9BRT3 115 aa9.71□□□□□ -0.86
CLN6-212ENST00000636020 C9orf92A6NGG3 77 aa9.7□□□□□ -0.86
CLN6-212ENST00000636020 C2orf91Q6ZV80 131 aa9.7□□□□□ -0.86
CLN6-212ENST00000636020 ZNF625Q96I27 306 aaPredicted RBP9.7□□□□□ -0.86
CLN6-212ENST00000636020 GAGE2AQ6NT46 116 aa9.69□□□□□ -0.86
CLN6-212ENST00000636020 CFC1P0CG37 223 aa9.68□□□□□ -0.86
CLN6-212ENST00000636020 KRTAP19-1Q8IUB9 90 aa9.67□□□□□ -0.86
CLN6-212ENST00000636020 A0A0J9YXY3 114 aa9.66□□□□□ -0.86
CLN6-212ENST00000636020 SFTA2Q6UW10 78 aa9.66□□□□□ -0.86
CLN6-212ENST00000636020 HIGD1BQ9P298 99 aa9.66□□□□□ -0.86
CLN6-212ENST00000636020 ERG28Q9UKR5 140 aa9.66□□□□□ -0.86
CLN6-212ENST00000636020 DDTP30046 118 aa9.65□□□□□ -0.86
CLN6-212ENST00000636020 SPRR1AP35321 89 aa9.65□□□□□ -0.86
CLN6-212ENST00000636020 HERV-K104P63124 156 aa9.65□□□□□ -0.86
CLN6-212ENST00000636020 COX17Q14061 63 aa9.64□□□□□ -0.87
CLN6-212ENST00000636020 PRYO14603 147 aa9.63□□□□□ -0.87
CLN6-212ENST00000636020 SCGB1D4Q6XE38 83 aa9.63□□□□□ -0.87
CLN6-212ENST00000636020 LITAFQ99732 161 aa9.63□□□□□ -0.87
CLN6-212ENST00000636020 KRTAP9-8Q9BYQ0 159 aa9.63□□□□□ -0.87
CLN6-212ENST00000636020 PCP4L1A6NKN8 68 aa9.62□□□□□ -0.87
CLN6-212ENST00000636020 TIMM17BO60830 172 aa9.62□□□□□ -0.87
CLN6-212ENST00000636020 SPANXB1Q9NS25 103 aaPredicted RBP9.61□□□□□ -0.87
CLN6-212ENST00000636020 ETDCA0A1B0GVM5 59 aa9.6□□□□□ -0.87
CLN6-212ENST00000636020 ERC2-IT1O76042 136 aa9.6□□□□□ -0.87
CLN6-212ENST00000636020 KCNQ1DNQ9H478 68 aa9.6□□□□□ -0.87
CLN6-212ENST00000636020 MEIG1Q5JSS6 88 aa9.59□□□□□ -0.87
CLN6-212ENST00000636020 SPANXDQ9BXN6 97 aa9.59□□□□□ -0.87
CLN6-212ENST00000636020 SPANXCQ9NY87 97 aa9.59□□□□□ -0.87
CLN6-212ENST00000636020 SMIM13P0DJ93 91 aa9.58□□□□□ -0.88
CLN6-212ENST00000636020 ADAMTSL4-AS1Q5T5F5 129 aa9.58□□□□□ -0.88
CLN6-212ENST00000636020 IGLV6-57P01721 117 aa9.57□□□□□ -0.88
CLN6-212ENST00000636020 HSD52Q0P140 79 aa9.57□□□□□ -0.88
CLN6-212ENST00000636020 TAL2Q16559 108 aa9.57□□□□□ -0.88
CLN6-212ENST00000636020 LINC00587B1AMM8 73 aa9.56□□□□□ -0.88
CLN6-212ENST00000636020 A0A0U1RRA0 63 aa9.55□□□□□ -0.88
CLN6-212ENST00000636020 HIST1H4GQ99525 98 aa9.55□□□□□ -0.88
CLN6-212ENST00000636020 LINC00158P58513 81 aa9.54□□□□□ -0.88
CLN6-212ENST00000636020 RPL37P61927 97 aaKnown RBP9.54□□□□□ -0.88
CLN6-212ENST00000636020 C9orf153Q5TBE3 101 aa9.54□□□□□ -0.88
CLN6-212ENST00000636020 Q6ZVH6 145 aa9.54□□□□□ -0.88
CLN6-212ENST00000636020 MIR7-3HGQ8N6C7 128 aa9.54□□□□□ -0.88
CLN6-212ENST00000636020 B5MCH6 92 aa9.53□□□□□ -0.88
CLN6-212ENST00000636020 CEND1Q8N111 149 aa9.53□□□□□ -0.88
CLN6-212ENST00000636020 SOSTDC1Q6X4U4 206 aa9.52□□□□□ -0.89
CLN6-212ENST00000636020 LIMD2Q9BT23 127 aa9.52□□□□□ -0.89
CLN6-212ENST00000636020 EIF4EBP3O60516 100 aaPredicted RBP9.51□□□□□ -0.89
CLN6-212ENST00000636020 IFITM1P13164 125 aa9.51□□□□□ -0.89
CLN6-212ENST00000636020 HINT1P49773 126 aaPredicted RBP9.51□□□□□ -0.89
CLN6-212ENST00000636020 BVES-AS1Q5T3Y7 98 aa9.51□□□□□ -0.89
CLN6-212ENST00000636020 MUSTN1Q8IVN3 82 aa9.51□□□□□ -0.89
CLN6-212ENST00000636020 LINC00308Q8TCZ7 52 aa9.51□□□□□ -0.89
CLN6-212ENST00000636020 LCE2BO14633 110 aa9.5□□□□□ -0.89
CLN6-212ENST00000636020 FXYD2P54710 66 aa9.5□□□□□ -0.89
CLN6-212ENST00000636020 Q9BRP9 147 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms